Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 5.2e-140 501.1 267 100.0
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 1.4e-100 370.2 238 82.4
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 2.6e-91 339.3 233 75.5
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 5.8e-91 338.2 236 74.6
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 1.1e-89 334.0 237 72.2
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 3.5e-88 328.9 235 72.8
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 1.0e-87 327.4 235 71.9
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 2.3e-87 326.2 234 72.2
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 3.0e-87 325.9 233 70.8
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 3.9e-87 325.5 241 70.5
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 3.9e-87 325.5 241 70.5
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 3.9e-87 325.5 245 67.8
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 5.1e-87 325.1 231 71.9
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 6.6e-87 324.7 235 73.2
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 8.6e-87 324.3 232 70.7
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.1e-86 323.9 245 69.0
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 1.1e-86 323.9 234 70.1
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 2.5e-86 322.8 244 68.4
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 3.3e-86 322.4 244 68.0
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 3.3e-86 322.4 244 68.9
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 5.6e-86 321.6 237 70.0
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 7.3e-86 321.2 234 70.1
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 7.3e-86 321.2 244 67.6
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 1.2e-85 320.5 231 70.1
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.2e-85 320.5 244 67.2
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 1.2e-85 320.5 232 72.4
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 1.2e-85 320.5 230 72.6
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 2.8e-85 319.3 233 71.2
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 2.8e-85 319.3 230 73.0
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 3.6e-85 318.9 236 69.5
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 3.6e-85 318.9 234 70.1
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 3.6e-85 318.9 230 71.7
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 3.6e-85 318.9 233 70.8
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 3.6e-85 318.9 233 70.8
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 4.7e-85 318.5 230 71.3
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 4.7e-85 318.5 249 68.7
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 4.7e-85 318.5 236 71.2
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 6.2e-85 318.2 236 70.8
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 6.2e-85 318.2 244 67.2
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 6.2e-85 318.2 232 71.1
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 6.2e-85 318.2 234 70.5
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 6.2e-85 318.2 230 70.9
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 1.1e-84 317.4 242 68.2
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 1.1e-84 317.4 211 76.3
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.4e-84 317.0 234 70.1
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 1.4e-84 317.0 234 70.1
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 1.4e-84 317.0 230 73.0
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 3.1e-84 315.8 232 69.4
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 4.0e-84 315.5 231 68.8
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 4.0e-84 315.5 231 70.6
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 4.0e-84 315.5 233 70.0
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 2.6e-83 312.8 232 70.3
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 2.6e-83 312.8 232 70.3
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.6e-83 312.8 231 69.7
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 2.6e-83 312.8 238 69.3
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 3.4e-83 312.4 236 68.2
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 5.8e-83 311.6 232 70.7
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 7.6e-83 311.2 230 69.6
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 1.3e-82 310.5 231 69.7
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.3e-82 310.5 231 69.3
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 2.9e-82 309.3 235 68.9
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 3.8e-82 308.9 233 68.2
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 6.4e-82 308.1 234 67.1
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 8.4e-82 307.8 231 68.8
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 8.4e-82 307.8 231 68.8
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 1.4e-81 307.0 230 67.4
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 1.9e-81 306.6 233 67.8
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 5.4e-81 305.1 231 69.7
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 7.1e-81 304.7 231 70.6
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 3.5e-80 302.4 231 67.5
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 6.0e-80 301.6 222 68.5
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 6.0e-80 301.6 232 68.5
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 7.8e-80 301.2 235 67.2
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 1.3e-79 300.4 231 65.8
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 1.7e-79 300.1 236 67.4
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 1.7e-79 300.1 232 66.8
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 2.3e-79 299.7 232 65.9
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.3e-79 299.7 211 71.1
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 3.9e-79 298.9 213 70.9
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 5.1e-79 298.5 222 68.0
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 4.3e-78 295.4 211 70.1
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 4.3e-78 295.4 232 65.9
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 1.3e-77 293.9 228 66.2
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 1.6e-77 293.5 233 65.7
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 1.6e-77 293.5 231 65.4
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 3.6e-77 292.4 234 64.1
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 3.6e-77 292.4 233 64.8
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 3.6e-77 292.4 233 64.8
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 3.6e-77 292.4 230 67.4
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 1.1e-76 290.8 231 64.5
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 1.4e-76 290.4 233 64.4
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 1.4e-76 290.4 233 64.4
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 4.0e-76 288.9 233 65.2
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 9.0e-76 287.7 233 64.4
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 2.0e-75 286.6 233 64.8
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 2.0e-75 286.6 233 64.4
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 3.4e-75 285.8 225 65.8
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 3.8e-74 282.3 323 50.8
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 4.9e-74 282.0 231 64.9
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 4.9e-74 282.0 233 63.1
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 6.4e-74 281.6 233 61.8
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 2.4e-73 279.6 247 60.7
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 7.9e-72 274.6 219 63.9
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 2.3e-71 273.1 266 56.0
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 1.1e-70 270.8 232 59.9
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 1.3e-69 267.3 242 55.8
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 4.0e-68 262.3 157 84.1
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 5.3e-68 261.9 211 63.0
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.5e-62 243.0 259 53.7
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 3.7e-61 239.2 246 54.5
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 2.2e-58 229.9 232 53.0
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 5.1e-55 218.8 148 73.0
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 3.1e-52 209.5 215 56.7
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 6.9e-52 208.4 148 70.9
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.5e-51 207.2 145 70.3
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 2.2e-50 203.4 215 55.3
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 1.8e-47 193.7 238 50.0
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 3.7e-45 186.0 109 80.7
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 4.3e-38 162.5 86 91.9
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 1.4e-36 157.5 86 90.7
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 1.2e-35 154.5 163 56.4
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 1.7e-34 150.6 207 39.6
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 9.4e-33 144.8 212 39.2
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 3.9e-31 139.4 196 39.3
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 1.7e-29 134.0 218 35.3
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 1.4e-28 131.0 65 95.4
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 5.3e-28 129.0 65 93.8
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 1.2e-27 127.9 65 93.8
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 5.9e-27 125.6 82 78.0
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 9.4e-25 118.2 112 55.4
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 2.1e-24 117.1 136 54.4
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 2.7e-24 116.7 72 79.2
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 1.8e-23 114.0 61 91.8
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 4.0e-23 112.8 72 79.2
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 4.0e-23 112.8 72 79.2
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 3.3e-22 109.8 215 30.7
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 5.7e-22 109.0 85 64.7
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 7.7e-19 98.6 86 60.5
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 7.7e-19 98.6 86 60.5
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 7.7e-19 98.6 86 60.5
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 3.8e-18 96.3 210 27.6
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 5.5e-17 92.4 218 30.3
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 1.2e-16 91.3 81 59.3
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 2.7e-16 90.1 72 61.1
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 3.0e-15 86.7 121 43.0
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 6.8e-15 85.5 52 78.8
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 1.7e-13 80.9 47 78.7
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 6.3e-13 79.0 51 74.5
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 1.8e-12 77.4 47 78.7
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.2e-11 74.7 144 36.8
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 3.5e-11 73.2 46 69.6
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 1.9e-09 67.4 184 26.1


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