Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.2650 Acer truncatum HOM05D006404 ORTHO05D008170 7.3e-56 220.3 111 100.0
Ciclev10014162m.g Citrus clementina HOM05D006404 ORTHO05D008170 1.9e-40 169.1 105 79.0
FAN25G0856 Fragaria x ananassa HOM05D006404 ORTHO05D008170 2.4e-38 162.2 106 73.6
FvH4_3g28450 Fragaria vesca HOM05D006404 ORTHO05D008170 3.1e-38 161.8 106 74.5
FAN11G2181 Fragaria x ananassa HOM05D006404 ORTHO05D008170 3.1e-38 161.8 106 74.5
FAN16G0405 Fragaria x ananassa HOM05D006404 ORTHO05D008170 3.1e-38 161.8 106 73.6
Cpa.g.sc84.27 Carica papaya HOM05D006404 ORTHO05D008170 4.0e-38 161.4 105 75.2
Manes.06G162300 Manihot esculenta HOM05D006404 ORTHO05D008170 1.2e-37 159.8 105 77.1
QL01p004100 Quercus lobata HOM05D006404 ORTHO05D008170 1.5e-37 159.5 107 74.8
TWI32G0006 Tripterygium wilfordii HOM05D006404 ORTHO05D008170 1.5e-37 159.5 106 74.5
Thecc.09G239000 Theobroma cacao HOM05D006404 ORTHO05D008170 3.4e-37 158.3 105 75.2
Gohir.A09G112350 Gossypium hirsutum HOM05D006404 ORTHO05D008170 7.6e-37 157.1 106 72.6
RcHm_v2.0_Chr5g0053011 Rosa chinensis HOM05D006404 ORTHO05D008170 7.6e-37 157.1 103 73.8
COL.COLO4_36457 Corchorus olitorius HOM05D006404 ORTHO05D008170 9.9e-37 156.8 105 72.4
Potri.001G255700 Populus trichocarpa HOM05D006404 ORTHO05D008170 1.7e-36 156.0 105 70.5
Cfa009810 Carpinus fangiana HOM05D006404 ORTHO05D008170 2.2e-36 155.6 105 74.3
Gohir.D09G109000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 2.9e-36 155.2 106 71.7
Gorai.006G126600 Gossypium raimondii HOM05D006404 ORTHO05D008170 2.9e-36 155.2 106 71.7
PGR102G1713 Punica granatum HOM05D006404 ORTHO05D008170 3.8e-36 154.8 105 71.4
Potri.009G051100 Populus trichocarpa HOM05D006404 ORTHO05D008170 6.4e-36 154.1 105 70.5
Sabra16G0156500 Salix brachista HOM05D006404 ORTHO05D008170 1.1e-35 153.3 105 70.5
GSVIVG01031534001 Vitis vinifera HOM05D006404 ORTHO05D008170 1.1e-35 153.3 105 70.5
Prupe.4G254900 Prunus persica HOM05D006404 ORTHO05D008170 1.4e-35 152.9 105 69.5
TAR633G0603 Trochodendron aralioides HOM05D006404 ORTHO05D008170 1.9e-35 152.5 105 75.2
CSS0037938 Camellia sinensis var. sinensis HOM05D006404 ORTHO05D008170 5.4e-35 151.0 104 70.2
CiPaw.13G154900 Carya illinoinensis HOM05D006404 ORTHO05D008170 5.4e-35 151.0 105 71.4
Actinidia06923 Actinidia chinensis HOM05D006404 ORTHO05D008170 7.1e-35 150.6 104 71.2
Sabra09G0037200 Salix brachista HOM05D006404 ORTHO05D008170 7.1e-35 150.6 104 70.2
CAN.G494.3 Capsicum annuum HOM05D006404 ORTHO05D008170 9.3e-35 150.2 104 69.2
Rhsim13G0217700 Rhododendron simsii HOM05D006404 ORTHO05D008170 1.2e-34 149.8 106 70.8
MSTRG.12459 Avicennia marina HOM05D006404 ORTHO05D008170 2.1e-34 149.1 104 67.3
Duzib150G0746 Durio zibethinus HOM05D006404 ORTHO05D008170 2.7e-34 148.7 99 74.7
Gorai.009G074000 Gossypium raimondii HOM05D006404 ORTHO05D008170 1.0e-33 146.7 105 69.5
Oeu061307.1 Olea europaea HOM05D006404 ORTHO05D008170 2.3e-33 145.6 104 68.3
Sc16g0011280 Simmondsia chinensis HOM05D006404 ORTHO05D008170 2.3e-33 145.6 105 68.6
Duzib168G1560 Durio zibethinus HOM05D006404 ORTHO05D008170 3.9e-33 144.8 105 69.5
FAN21G1559 Fragaria x ananassa HOM05D006404 ORTHO05D008170 8.7e-33 143.7 128 60.9
MD03G1172000 Malus domestica HOM05D006404 ORTHO05D008170 1.5e-32 142.9 104 70.2
Gohir.D05G072932 Gossypium hirsutum HOM05D006404 ORTHO05D008170 1.9e-32 142.5 105 67.6
TAR633G2510 Trochodendron aralioides HOM05D006404 ORTHO05D008170 1.9e-32 142.5 103 70.9
Haze_23174 Corylus avellana HOM05D006404 ORTHO05D008170 4.3e-32 141.4 97 72.2
ClCG03G013070 Citrullus lanatus HOM05D006404 ORTHO05D008170 5.6e-32 141.0 105 65.7
VMungo1127G0106 Vigna mungo HOM05D006404 ORTHO05D008170 9.6e-32 140.2 106 60.4
Aqoxy2G00213 Aquilegia oxysepala HOM05D006404 ORTHO05D008170 1.3e-31 139.8 110 65.5
Lsat_1_v5_gn_6_25840 Lactuca sativa HOM05D006404 ORTHO05D008170 2.1e-31 139.0 100 65.0
Lalb_Chr03g0024521 Lupinus albus HOM05D006404 ORTHO05D008170 2.1e-31 139.0 108 60.2
CANSAT54G0859 Cannabis sativa HOM05D006404 ORTHO05D008170 6.2e-31 137.5 105 64.8
Migut.N02343 Erythranthe guttata HOM05D006404 ORTHO05D008170 8.1e-31 137.1 104 66.3
Eucgr.B03709 Eucalyptus grandis HOM05D006404 ORTHO05D008170 1.1e-30 136.7 105 62.9
CsaV3_1G042990 Cucumis sativus L. HOM05D006404 ORTHO05D008170 1.4e-30 136.3 105 61.9
Glyma.12G020900 Glycine max HOM05D006404 ORTHO05D008170 1.4e-30 136.3 106 60.4
PGSC0003DMG400029994 Solanum tuberosum HOM05D006404 ORTHO05D008170 1.4e-30 136.3 104 63.5
HanXRQChr13g0401241 Helianthus annuus HOM05D006404 ORTHO05D008170 1.8e-30 136.0 104 63.5
Lj3g0019929 Lotus japonicus HOM05D006404 ORTHO05D008170 2.4e-30 135.6 106 59.4
Sed0002434 Sechium edule HOM05D006404 ORTHO05D008170 3.1e-30 135.2 106 60.4
Actinidia16347 Actinidia chinensis HOM05D006404 ORTHO05D008170 4.0e-30 134.8 104 65.4
ECA233G0536 Erigeron canadensis HOM05D006404 ORTHO05D008170 4.0e-30 134.8 103 64.1
Nn2g15163 Nelumbo nucifera HOM05D006404 ORTHO05D008170 4.0e-30 134.8 105 64.8
Cc01_g05020 Coffea canephora HOM05D006404 ORTHO05D008170 5.3e-30 134.4 104 61.5
Solyc11g065340.2 Solanum lycopersicum HOM05D006404 ORTHO05D008170 5.3e-30 134.4 104 62.5
Nn7g36358 Nelumbo nucifera HOM05D006404 ORTHO05D008170 6.9e-30 134.0 106 65.1
Ca_26059_v3 Cicer arietinum L. HOM05D006404 ORTHO05D008170 9.0e-30 133.7 108 60.2
Ca_30127_v3 Cicer arietinum L. HOM05D006404 ORTHO05D008170 9.0e-30 133.7 108 60.2
THA.LOC104811179 Tarenaya hassleriana HOM05D006404 ORTHO05D008170 1.2e-29 133.3 106 65.1
Hund07470 Selenicereus undatus HOM05D006404 ORTHO05D008170 1.5e-29 132.9 104 65.4
Lj2A624G32 Lonicera japonica HOM05D006404 ORTHO05D008170 2.0e-29 132.5 95 68.4
HPP92_028181 Vanilla planifolia HOM05D006404 ORTHO05D008170 3.4e-29 131.7 108 61.1
DCAR_029968 Daucus carota HOM05D006404 ORTHO05D008170 4.5e-29 131.3 104 61.5
Phvul.011G076700 Phaseolus vulgaris HOM05D006404 ORTHO05D008170 4.5e-29 131.3 109 58.7
ATR0307G124 Amborella trichopoda HOM05D006404 ORTHO05D008170 9.9e-29 130.2 105 60.0
Nitab4.5_0006123g0010 Nicotiana tabacum HOM05D006404 ORTHO05D008170 2.2e-28 129.0 104 61.5
EL10Ac4g10212 Beta vulgaris HOM05D006404 ORTHO05D008170 2.9e-28 128.6 105 61.9
AUR62039864 Chenopodium quinoa HOM05D006404 ORTHO05D008170 4.9e-28 127.9 105 63.8
Nitab4.5_0007711g0010 Nicotiana tabacum HOM05D006404 ORTHO05D008170 4.9e-28 127.9 104 59.6
AUR62000151 Chenopodium quinoa HOM05D006404 ORTHO05D008170 1.9e-27 125.9 105 62.9
Os01g0275950 Oryza sativa ssp. japonica HOM05D006404 ORTHO05D008170 2.4e-27 125.6 108 59.3
MELO3C015171.2 Cucumis melo HOM05D006404 ORTHO05D008170 5.5e-27 124.4 105 57.1
Glyma.01G227500 Glycine max HOM05D006404 ORTHO05D008170 1.2e-26 123.2 104 57.7
Lsat_1_v5_gn_8_47480 Lactuca sativa HOM05D006404 ORTHO05D008170 2.1e-26 122.5 104 61.5
Ah.06g193910 Amaranthus hybridus HOM05D006404 ORTHO05D008170 3.5e-26 121.7 105 60.0
Zm00001eb332810 Zea mays HOM05D006404 ORTHO05D008170 3.5e-26 121.7 108 60.2
VMungo1215G1207 Vigna mungo HOM05D006404 ORTHO05D008170 6.0e-26 120.9 106 56.6
Medtr4g076810 Medicago truncatula HOM05D006404 ORTHO05D008170 1.8e-25 119.4 104 56.7
Lsat_1_v5_gn_5_69941 Lactuca sativa HOM05D006404 ORTHO05D008170 3.0e-25 118.6 94 62.8
SGA_v2.0_scaffold3G01478 Striga asiatica HOM05D006404 ORTHO05D008170 3.3e-24 115.2 105 60.0
unitig_27.g24999 Utricularia gibba HOM05D006404 ORTHO05D008170 4.3e-24 114.8 104 53.8
TPR.G13759 Trifolium pratense HOM05D006404 ORTHO05D008170 5.6e-24 114.4 104 54.8
SEGI_17812 Sequoiadendron giganteum HOM05D006404 ORTHO05D008170 7.4e-24 114.0 108 57.4
Psat7g172680 Pisum sativum HOM05D006404 ORTHO05D008170 1.6e-23 112.8 104 51.0
Sopen11g025080 Solanum pennellii HOM05D006404 ORTHO05D008170 3.1e-22 108.6 70 70.0
Peaxi162Scf00004g03311 Petunia axillaris HOM05D006404 ORTHO05D008170 2.0e-21 105.9 104 51.0
MBI19_g48146_MAGBIO Magnolia biondii HOM05D006404 ORTHO05D008170 4.5e-21 104.8 67 70.1
Mapoly0128s0014 Marchantia polymorpha HOM05D006404 ORTHO05D008170 2.9e-20 102.1 104 51.0
Manes.14G004336 Manihot esculenta HOM05D006404 ORTHO05D008170 8.4e-20 100.5 81 65.4
Lsat_1_v5_gn_4_119980 Lactuca sativa HOM05D006404 ORTHO05D008170 1.4e-19 99.8 81 60.5
arahy.Tifrunner.gnm1.ann1.BK260Y Arachis hypogaea HOM05D006404 ORTHO05D008170 4.6e-18 94.7 104 43.3
arahy.Tifrunner.gnm1.ann1.E0EAPG Arachis hypogaea HOM05D006404 ORTHO05D008170 4.6e-18 94.7 104 43.3
vmacro04128 Vaccinium macrocarpon HOM05D006404 ORTHO05D008170 1.1e-16 90.1 82 61.0
CBR_g12234 Chara braunii HOM05D006404 ORTHO05D008170 2.2e-15 85.9 78 48.7
MBI19_g45588_MAGBIO Magnolia biondii HOM05D006404 ORTHO05D008170 2.4e-14 82.4 102 47.1


User provided reference genes

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