Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 6.5e-32 140.2 75 100.0
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 8.5e-24 113.2 64 93.8
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 1.1e-18 96.3 71 76.1
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 2.6e-17 91.7 83 65.1
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 7.7e-17 90.1 83 62.7
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 1.7e-16 89.0 83 62.7
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 3.8e-16 87.8 83 62.7
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 3.8e-16 87.8 83 60.2
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 3.8e-16 87.8 83 60.2
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 3.8e-16 87.8 83 61.4
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 3.8e-16 87.8 89 60.7
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 6.5e-16 87.0 83 61.4
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 6.5e-16 87.0 83 61.4
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 6.5e-16 87.0 83 61.4
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 6.5e-16 87.0 83 61.4
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 6.5e-16 87.0 83 61.4
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 6.5e-16 87.0 83 61.4
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 6.5e-16 87.0 83 61.4
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 6.5e-16 87.0 83 61.4
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 6.5e-16 87.0 87 57.5
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 6.5e-16 87.0 87 57.5
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 6.5e-16 87.0 83 61.4
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 8.5e-16 86.7 87 58.6
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 8.5e-16 86.7 83 60.2
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 8.5e-16 86.7 83 61.4
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 1.1e-15 86.3 87 56.3
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 1.1e-15 86.3 87 56.3
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 1.1e-15 86.3 83 60.2
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 1.9e-15 85.5 83 60.2
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 1.9e-15 85.5 83 60.2
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 1.9e-15 85.5 83 59.0
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 2.5e-15 85.1 83 59.0
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 2.5e-15 85.1 83 59.0
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 2.5e-15 85.1 83 59.0
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 2.5e-15 85.1 83 59.0
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 2.5e-15 85.1 83 60.2
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 2.5e-15 85.1 84 63.1
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 3.2e-15 84.7 84 61.9
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 3.2e-15 84.7 89 57.3
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 4.2e-15 84.3 83 59.0
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 4.2e-15 84.3 84 61.9
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 4.2e-15 84.3 83 59.0
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 4.2e-15 84.3 84 60.7
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 5.5e-15 84.0 84 61.9
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 5.5e-15 84.0 84 61.9
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 5.5e-15 84.0 84 63.1
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 5.5e-15 84.0 84 59.5
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 7.2e-15 83.6 83 57.8
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 7.2e-15 83.6 83 56.6
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 7.2e-15 83.6 84 60.7
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 7.2e-15 83.6 84 60.7
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 7.2e-15 83.6 84 60.7
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 9.4e-15 83.2 84 60.7
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 1.2e-14 82.8 83 56.6
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 1.2e-14 82.8 84 59.5
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 1.2e-14 82.8 80 61.2
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 1.6e-14 82.4 83 56.6
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 1.6e-14 82.4 83 56.6
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 1.6e-14 82.4 84 59.5
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.6e-14 82.4 87 55.2
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 2.1e-14 82.0 83 57.8
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 2.1e-14 82.0 83 56.6
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 2.7e-14 81.6 84 59.5
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 2.7e-14 81.6 83 56.6
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 3.6e-14 81.3 93 52.7
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 4.7e-14 80.9 83 57.8
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 6.1e-14 80.5 84 59.5
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 6.1e-14 80.5 83 57.8
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 1.0e-13 79.7 83 55.4
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 1.8e-13 79.0 89 57.3
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 2.3e-13 78.6 83 55.4
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 3.0e-13 78.2 87 50.6
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 3.0e-13 78.2 83 54.2
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 3.0e-13 78.2 83 54.2
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 3.0e-13 78.2 84 60.7
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 3.0e-13 78.2 83 51.8
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 4.0e-13 77.8 96 50.0
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 5.2e-13 77.4 89 53.9
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 6.8e-13 77.0 83 54.2
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 6.8e-13 77.0 83 55.4
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 6.8e-13 77.0 83 56.6
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 6.8e-13 77.0 83 54.2
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 8.8e-13 76.6 98 51.0
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 8.8e-13 76.6 84 59.5
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 1.5e-12 75.9 83 51.8
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 2.0e-12 75.5 87 57.5
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 2.0e-12 75.5 83 54.2
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 2.0e-12 75.5 83 54.2
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 3.4e-12 74.7 83 53.0
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 3.4e-12 74.7 101 47.5
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 3.4e-12 74.7 82 59.8
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 3.4e-12 74.7 83 49.4
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 4.4e-12 74.3 83 51.8
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 5.7e-12 73.9 80 55.0
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 5.7e-12 73.9 85 51.8
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 7.5e-12 73.6 80 53.8
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 1.3e-11 72.8 84 54.8
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 1.3e-11 72.8 87 52.9
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 1.7e-11 72.4 89 49.4
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 1.7e-11 72.4 89 49.4
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 1.7e-11 72.4 80 52.5
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 2.2e-11 72.0 83 49.4
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 2.8e-11 71.6 90 51.1
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 4.8e-11 70.9 83 51.8
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 6.3e-11 70.5 87 50.6
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.4e-10 68.6 63 61.9
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 5.3e-10 67.4 83 48.2
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 2.0e-09 65.5 45 80.0
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 3.5e-09 64.7 45 77.8
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 4.5e-09 64.3 83 45.8
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 2.2e-08 62.0 125 38.4
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 5.0e-08 60.8 94 41.5
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 6.5e-08 60.5 83 47.0
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 2.5e-07 58.5 80 48.8
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 4.2e-07 57.8 83 47.0
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 4.2e-07 57.8 86 41.9
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 5.5e-07 57.4 85 42.4
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 1.2e-06 56.2 86 43.0
C07p55210 Brassica napus HOM05D005878 ORTHO05D033170 3.6e-06 54.7 43 74.4
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 6.1e-06 53.9 83 39.8
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 8.0e-06 53.5 86 39.5
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 8.0e-06 53.5 86 40.7


User provided reference genes

Program Settings