Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.2515 Acer truncatum HOM05D000843 ORTHO05D000698 9.2e-77 290.0 136 100.0
Duzib168G0956 Durio zibethinus HOM05D000843 ORTHO05D000698 3.4e-39 165.2 136 58.1
Thecc.09G224000 Theobroma cacao HOM05D000843 ORTHO05D000698 4.5e-39 164.9 136 57.4
QL01p006143 Quercus lobata HOM05D000843 ORTHO05D000698 7.6e-39 164.1 136 55.9
Duzib150G1046 Durio zibethinus HOM05D000843 ORTHO05D000698 9.9e-39 163.7 136 59.6
TWI60G0275 Tripterygium wilfordii HOM05D000843 ORTHO05D000698 2.9e-38 162.2 137 53.3
TWI32G0588 Tripterygium wilfordii HOM05D000843 ORTHO05D000698 4.2e-37 158.3 137 54.7
Duzib170G1134 Durio zibethinus HOM05D000843 ORTHO05D000698 2.7e-36 155.6 136 57.4
Duzib170G0288 Durio zibethinus HOM05D000843 ORTHO05D000698 3.5e-36 155.2 136 57.4
COL.COLO4_09900 Corchorus olitorius HOM05D000843 ORTHO05D000698 6.0e-36 154.5 136 57.4
GSVIVG01025324001 Vitis vinifera HOM05D000843 ORTHO05D000698 6.0e-36 154.5 138 55.1
Cpa.g.sc84.104 Carica papaya HOM05D000843 ORTHO05D000698 1.0e-35 153.7 139 51.8
Gohir.A05G067500 Gossypium hirsutum HOM05D000843 ORTHO05D000698 3.0e-35 152.1 136 55.9
Gohir.D05G070400 Gossypium hirsutum HOM05D000843 ORTHO05D000698 8.7e-35 150.6 136 55.9
Gorai.009G071400 Gossypium raimondii HOM05D000843 ORTHO05D000698 7.4e-34 147.5 134 56.0
CiPaw.14G123700 Carya illinoinensis HOM05D000843 ORTHO05D000698 9.6e-34 147.1 136 50.0
Prupe.6G018200 Prunus persica HOM05D000843 ORTHO05D000698 1.3e-33 146.7 136 51.5
Dinv08049 Davidia involucrata HOM05D000843 ORTHO05D000698 1.6e-33 146.4 175 44.0
ClCG00G002220 Citrullus lanatus HOM05D000843 ORTHO05D000698 6.9e-32 141.0 136 47.8
ClCG03G013440 Citrullus lanatus HOM05D000843 ORTHO05D000698 6.9e-32 141.0 136 47.8
Hma1.2p1_0728F.1_g209410 Hydrangea macrophylla HOM05D000843 ORTHO05D000698 2.0e-31 139.4 159 45.9
CSS0039965 Camellia sinensis var. sinensis HOM05D000843 ORTHO05D000698 2.6e-31 139.0 175 42.9
Sed0014223 Sechium edule HOM05D000843 ORTHO05D000698 5.8e-31 137.9 136 47.1
MELO3C015210.2 Cucumis melo HOM05D000843 ORTHO05D000698 1.0e-30 137.1 137 48.2
TAR163G0003 Trochodendron aralioides HOM05D000843 ORTHO05D000698 1.3e-30 136.7 139 48.2
CiPaw.13G165200 Carya illinoinensis HOM05D000843 ORTHO05D000698 2.2e-30 136.0 136 48.5
CSS0029751 Camellia sinensis var. sinensis HOM05D000843 ORTHO05D000698 2.9e-30 135.6 175 42.3
CsaV3_1G042580 Cucumis sativus L. HOM05D000843 ORTHO05D000698 2.9e-30 135.6 137 48.2
CANSAT54G0806 Cannabis sativa HOM05D000843 ORTHO05D000698 3.8e-30 135.2 126 47.6
Gorai.010G128700 Gossypium raimondii HOM05D000843 ORTHO05D000698 3.5e-28 128.6 133 50.4
Gohir.D06G112800 Gossypium hirsutum HOM05D000843 ORTHO05D000698 6.0e-28 127.9 133 50.4
MD11G1022400 Malus domestica HOM05D000843 ORTHO05D000698 1.0e-27 127.1 142 45.1
Gohir.A06G108800 Gossypium hirsutum HOM05D000843 ORTHO05D000698 1.3e-27 126.7 133 49.6
Cfa009700 Carpinus fangiana HOM05D000843 ORTHO05D000698 1.8e-27 126.3 138 50.0
RcHm_v2.0_Chr5g0078151 Rosa chinensis HOM05D000843 ORTHO05D000698 1.3e-25 120.2 137 48.2
CSS0020072 Camellia sinensis var. sinensis HOM05D000843 ORTHO05D000698 3.7e-25 118.6 131 44.3
Hma1.2p1_0290F.1_g114860 Hydrangea macrophylla HOM05D000843 ORTHO05D000698 4.8e-25 118.2 138 44.2
Lalb_Chr22g0352271 Lupinus albus HOM05D000843 ORTHO05D000698 1.8e-24 116.3 139 46.8
Nn7g36062 Nelumbo nucifera HOM05D000843 ORTHO05D000698 4.1e-24 115.2 140 43.6
Aqoxy5G01826 Aquilegia oxysepala HOM05D000843 ORTHO05D000698 5.3e-24 114.8 140 42.9
Haze_23049 Corylus avellana HOM05D000843 ORTHO05D000698 5.3e-24 114.8 122 50.8
Glyma.13G342500 Glycine max HOM05D000843 ORTHO05D000698 6.9e-24 114.4 138 42.8
Lalb_Chr24g0396951 Lupinus albus HOM05D000843 ORTHO05D000698 6.9e-24 114.4 139 45.3
Phvul.L011743 Phaseolus vulgaris HOM05D000843 ORTHO05D000698 3.4e-23 112.1 136 42.6
MD03G1020800 Malus domestica HOM05D000843 ORTHO05D000698 5.9e-23 111.3 142 41.5
Manes.14G014100 Manihot esculenta HOM05D000843 ORTHO05D000698 1.7e-22 109.8 139 43.2
Sed0012160 Sechium edule HOM05D000843 ORTHO05D000698 2.9e-22 109.0 137 43.1
Glyma.15G031800 Glycine max HOM05D000843 ORTHO05D000698 5.0e-22 108.2 137 40.9
Cfa013097 Carpinus fangiana HOM05D000843 ORTHO05D000698 8.5e-22 107.5 139 43.9
Ca_01273_v3 Cicer arietinum L. HOM05D000843 ORTHO05D000698 1.4e-21 106.7 143 41.3
VMungo1080G0975 Vigna mungo HOM05D000843 ORTHO05D000698 2.5e-21 105.9 137 42.3
Nn2g15574 Nelumbo nucifera HOM05D000843 ORTHO05D000698 5.5e-21 104.8 137 40.9
Lj2C654T7 Lonicera japonica HOM05D000843 ORTHO05D000698 9.4e-21 104.0 121 45.5
Potri.003G210500 Populus trichocarpa HOM05D000843 ORTHO05D000698 9.4e-21 104.0 142 46.5
Actinidia06324 Actinidia chinensis HOM05D000843 ORTHO05D000698 1.2e-20 103.6 131 45.0
FvH4_3g43580 Fragaria vesca HOM05D000843 ORTHO05D000698 1.6e-20 103.2 137 46.7
FAN25G2176 Fragaria x ananassa HOM05D000843 ORTHO05D000698 1.6e-20 103.2 137 46.7
Potri.001G015900 Populus trichocarpa HOM05D000843 ORTHO05D000698 2.7e-20 102.4 138 44.9
Sc16g0011700 Simmondsia chinensis HOM05D000843 ORTHO05D000698 3.6e-20 102.1 135 39.3
FAN16G2838 Fragaria x ananassa HOM05D000843 ORTHO05D000698 1.4e-19 100.1 137 46.0
Nitab4.5_0003069g0060 Nicotiana tabacum HOM05D000843 ORTHO05D000698 1.4e-19 100.1 130 41.5
FAN11G0953 Fragaria x ananassa HOM05D000843 ORTHO05D000698 2.3e-19 99.4 137 46.0
Sabra03G0153600 Salix brachista HOM05D000843 ORTHO05D000698 2.3e-19 99.4 140 44.3
Nitab4.5_0006575g0030 Nicotiana tabacum HOM05D000843 ORTHO05D000698 5.1e-19 98.2 130 42.3
arahy.Tifrunner.gnm1.ann1.798WTR Arachis hypogaea HOM05D000843 ORTHO05D000698 6.7e-19 97.8 138 38.4
Eucgr.B03664 Eucalyptus grandis HOM05D000843 ORTHO05D000698 1.1e-18 97.1 135 40.0
Sabra01G0011100 Salix brachista HOM05D000843 ORTHO05D000698 1.3e-17 93.6 136 42.6
FAN21G0701 Fragaria x ananassa HOM05D000843 ORTHO05D000698 1.7e-17 93.2 123 46.3
Rhsim01G0189500 Rhododendron simsii HOM05D000843 ORTHO05D000698 2.2e-17 92.8 132 39.4
CAN.G442.2 Capsicum annuum HOM05D000843 ORTHO05D000698 3.7e-17 92.0 120 41.7
PGSC0003DMG400029908 Solanum tuberosum HOM05D000843 ORTHO05D000698 6.3e-17 91.3 131 40.5
Psat5g288560 Pisum sativum HOM05D000843 ORTHO05D000698 1.4e-16 90.1 138 35.5
Sopen01g009190 Solanum pennellii HOM05D000843 ORTHO05D000698 1.8e-16 89.7 127 39.4
Peaxi162Scf00773g00012 Petunia axillaris HOM05D000843 ORTHO05D000698 6.9e-16 87.8 122 40.2
Ciclev10017431m.g Citrus clementina HOM05D000843 ORTHO05D000698 9.1e-16 87.4 89 50.6
Lj3g0021131 Lotus japonicus HOM05D000843 ORTHO05D000698 9.1e-16 87.4 138 38.4
AUR62000081 Chenopodium quinoa HOM05D000843 ORTHO05D000698 4.5e-15 85.1 137 38.7
MBI01_g15750_MAGBIO Magnolia biondii HOM05D000843 ORTHO05D000698 5.9e-15 84.7 124 39.5
THA.LOC104812154 Tarenaya hassleriana HOM05D000843 ORTHO05D000698 1.3e-14 83.6 112 41.1
AUR62019253 Chenopodium quinoa HOM05D000843 ORTHO05D000698 1.7e-14 83.2 137 38.7
AUR62043679 Chenopodium quinoa HOM05D000843 ORTHO05D000698 1.7e-14 83.2 137 38.7
Sc12g0010460 Simmondsia chinensis HOM05D000843 ORTHO05D000698 3.8e-14 82.0 102 41.2
Rhsim13G0225200 Rhododendron simsii HOM05D000843 ORTHO05D000698 5.0e-14 81.6 131 39.7
Lalb_Chr19g0138241 Lupinus albus HOM05D000843 ORTHO05D000698 1.9e-13 79.7 139 37.4
MSTRG.17571 Avicennia marina HOM05D000843 ORTHO05D000698 2.5e-13 79.3 143 34.3
Medtr2g098470 Medicago truncatula HOM05D000843 ORTHO05D000698 7.2e-13 77.8 140 35.0
Potri.001G016032 Populus trichocarpa HOM05D061915 ORTHO05D050560 9.4e-13 77.4 107 42.1
PGR102G2840 Punica granatum HOM05D000843 ORTHO05D000698 9.4e-13 77.4 141 35.5
ATR0605G094 Amborella trichopoda HOM05D000843 ORTHO05D000698 7.9e-12 74.3 148 35.8
Lju1319C2T7 Lonicera japonica HOM05D000843 ORTHO05D000698 1.4e-11 73.6 106 40.6
Manes.06G168800 Manihot esculenta HOM05D000843 ORTHO05D000698 3.0e-11 72.4 128 35.2
Lj1C364T8 Lonicera japonica HOM05D000843 ORTHO05D000698 3.9e-11 72.0 105 40.0
Solyc01g014480.3 Solanum lycopersicum HOM05D000843 ORTHO05D000698 5.1e-11 71.6 109 38.5
CDE04G2585 Ceratophyllum demersum HOM05D000843 ORTHO05D000698 1.5e-10 70.1 128 32.8
Actinidia39383 Actinidia chinensis HOM05D000843 ORTHO05D000698 2.6e-10 69.3 91 45.1
Cc01_g04200 Coffea canephora HOM05D000843 ORTHO05D000698 3.3e-10 68.9 102 38.2
PSO384G4373 Papaver somniferum HOM05D000843 ORTHO05D000698 1.3e-09 67.0 139 36.7
Medtr2g098450 Medicago truncatula HOM05D000843 ORTHO05D000698 2.2e-09 66.2 144 31.2
Peaxi162Scf00559g00420 Petunia axillaris HOM05D000843 ORTHO05D000698 2.2e-09 66.2 113 38.9
HanXRQChr02g0056481 Helianthus annuus HOM05D000843 ORTHO05D000698 2.8e-09 65.9 139 33.8
TPR.G18848 Trifolium pratense HOM05D000843 ORTHO05D000698 1.4e-08 63.5 89 36.0
Nitab4.5_0003796g0080 Nicotiana tabacum HOM05D000843 ORTHO05D000698 1.8e-08 63.2 121 36.4
DCAR_029939 Daucus carota HOM05D000843 ORTHO05D000698 2.4e-08 62.8 135 28.9
Nitab4.5_0009808g0030 Nicotiana tabacum HOM05D000843 ORTHO05D000698 4.1e-08 62.0 117 34.2
PSO339G1804 Papaver somniferum HOM05D000843 ORTHO05D000698 1.5e-07 60.1 140 35.0
CDE07G0914 Ceratophyllum demersum HOM05D000843 ORTHO05D000698 2.6e-07 59.3 134 32.1
HanXRQChr13g0403931 Helianthus annuus HOM05D000843 ORTHO05D000698 4.5e-07 58.5 130 31.5
CDE07G1755 Ceratophyllum demersum HOM05D000843 ORTHO05D000698 2.9e-06 55.8 134 27.6
BcaB03g15079 Brassica carinata HOM05D000843 ORTHO05D000698 5.0e-06 55.1 128 31.2
Sopen01g002640 Solanum pennellii HOM05D000843 ORTHO05D000698 8.5e-06 54.3 138 31.9
SGA_v2.0_scaffold3G01549 Striga asiatica HOM05D000843 ORTHO05D000698 8.5e-06 54.3 111 32.4


User provided reference genes

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