Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.21 Acer truncatum HOM05D008614 ORTHO05D010420 3.9e-61 238.0 127 100.0
Oeu000527.1 Olea europaea HOM05D008614 ORTHO05D010420 3.1e-18 95.5 100 60.0
TWI60G1637 Tripterygium wilfordii HOM05D008614 ORTHO05D010420 1.2e-17 93.6 94 58.5
Peaxi162Scf00981g00031 Petunia axillaris HOM05D008614 ORTHO05D010420 2.2e-16 89.4 108 53.7
Prupe.7G188200 Prunus persica HOM05D008614 ORTHO05D010420 6.5e-16 87.8 160 43.8
Thecc.01G001000 Theobroma cacao HOM05D008614 ORTHO05D010420 4.2e-15 85.1 99 54.5
Sopen02g017350 Solanum pennellii HOM05D008614 ORTHO05D010420 7.2e-15 84.3 153 39.2
Ciclev10002723m.g Citrus clementina HOM05D008614 ORTHO05D010420 9.4e-15 84.0 110 54.5
PGR102G2725 Punica granatum HOM05D008614 ORTHO05D010420 1.6e-14 83.2 99 51.5
Potri.011G146000 Populus trichocarpa HOM05D008614 ORTHO05D010420 7.9e-14 80.9 99 53.5
MD15G1227100 Malus domestica HOM05D008614 ORTHO05D010420 1.0e-13 80.5 149 40.9
DCAR_014125 Daucus carota HOM05D008614 ORTHO05D010420 1.8e-13 79.7 105 49.5
TAR376G0905 Trochodendron aralioides HOM05D008614 ORTHO05D010420 1.8e-13 79.7 145 42.1
Nitab4.5_0003878g0060 Nicotiana tabacum HOM05D008614 ORTHO05D010420 3.9e-13 78.6 107 53.3
Dinv19115 Davidia involucrata HOM05D008614 ORTHO05D010420 6.7e-13 77.8 101 51.5
Dinv40227 Davidia involucrata HOM05D008614 ORTHO05D010420 6.7e-13 77.8 101 51.5
Aqoxy6G03038 Aquilegia oxysepala HOM05D008614 ORTHO05D010420 1.5e-12 76.6 174 37.9
FAN19G2600 Fragaria x ananassa HOM05D008614 ORTHO05D010420 1.9e-12 76.3 109 45.0
FAN23G2016 Fragaria x ananassa HOM05D008614 ORTHO05D010420 1.9e-12 76.3 109 45.0
FAN26G1944 Fragaria x ananassa HOM05D008614 ORTHO05D010420 1.9e-12 76.3 109 45.0
Glyma.09G195300 Glycine max HOM05D008614 ORTHO05D010420 2.5e-12 75.9 108 44.4
Hma1.2p1_0034F.1_g021610 Hydrangea macrophylla HOM05D008614 ORTHO05D010420 3.3e-12 75.5 106 52.8
FAN23G1636 Fragaria x ananassa HOM05D008614 ORTHO05D010420 1.7e-11 73.2 109 44.0
Solyc02g068250.4 Solanum lycopersicum HOM05D008614 ORTHO05D010420 3.7e-11 72.0 84 51.2
Lj2A507G42 Lonicera japonica HOM05D008614 ORTHO05D010420 1.8e-10 69.7 98 54.1
Potri.001G456100 Populus trichocarpa HOM05D008614 ORTHO05D010420 1.8e-10 69.7 119 42.9
SGA_v2.0_scaffold183G39898 Striga asiatica HOM05D008614 ORTHO05D010420 1.2e-09 67.0 95 49.5
Actinidia22866 Actinidia chinensis HOM05D008614 ORTHO05D010420 2.6e-09 65.9 103 44.7
FvH4_1g09770 Fragaria vesca HOM05D008614 ORTHO05D010420 3.4e-09 65.5 144 36.1
Medtr8g072450 Medicago truncatula HOM05D008614 ORTHO05D010420 3.4e-09 65.5 95 42.1
Migut.K00408 Erythranthe guttata HOM05D008614 ORTHO05D010420 1.3e-08 63.5 76 55.3
FAN28G0102 Fragaria x ananassa HOM05D008614 ORTHO05D010420 1.7e-08 63.2 148 34.5
ECA246G3890 Erigeron canadensis HOM05D008614 ORTHO05D010420 5.0e-08 61.6 92 41.3
FAN23G3076 Fragaria x ananassa HOM05D008614 ORTHO05D010420 8.5e-08 60.8 90 41.1
MBI04_g42539_MAGBIO Magnolia biondii HOM05D008614 ORTHO05D010420 4.2e-07 58.5 70 50.0
Cpa.g.sc6.374 Carica papaya HOM05D008614 ORTHO05D010420 5.5e-07 58.2 58 58.6
Lsat_1_v5_gn_3_68380 Lactuca sativa HOM05D008614 ORTHO05D010420 7.2e-07 57.8 94 40.4
MBI01_g32847_MAGBIO Magnolia biondii HOM05D039595 ORTHO05D010420 9.4e-07 57.4 114 36.8
Aqoxy3G02357 Aquilegia oxysepala HOM05D008115 ORTHO05D010112 3.6e-06 55.5 107 37.4
Rhsim10G0190400 Rhododendron simsii HOM05D008614 ORTHO05D010420 6.1e-06 54.7 124 33.1
Nitab4.5_0000235g0030 Nicotiana tabacum HOM05D008614 ORTHO05D010420 7.9e-06 54.3 112 39.3


User provided reference genes

Program Settings