Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.1903 Acer truncatum HOM05D000023 ORTHO05D017150 5.4e-69 264.2 135 100.0
Atru.chr12.1930 Acer truncatum HOM05D000023 ORTHO05D000014 1.5e-34 149.8 105 73.3
Atru.chr12.1937 Acer truncatum HOM05D000023 ORTHO05D000014 1.5e-34 149.8 105 73.3
Atru.chr1.1880 Acer truncatum HOM05D000023 ORTHO05D000014 4.3e-26 121.7 148 50.7
Atru.chr9.611 Acer truncatum HOM05D000023 ORTHO05D000014 2.9e-22 109.0 62 87.1
Atru.chr8.33 Acer truncatum HOM05D000023 ORTHO05D000014 8.4e-22 107.5 118 55.1
Atru.chr6.523 Acer truncatum HOM05D000023 ORTHO05D000014 5.4e-21 104.8 117 56.4
Hma1.2p1_0545F.1_g175990 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.3e-18 95.5 79 57.0
Rhsim05G0095700 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.5e-15 86.7 135 40.7
Rhsim07G0175200 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.4e-13 80.1 135 40.0
Rhsim09G0032000 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.4e-13 79.3 78 51.3
Thhalv10015438m.g Eutrema salsugineum HOM05D000023 ORTHO05D000014 1.8e-11 73.2 87 48.3
Atru.chr8.863 Acer truncatum HOM05D000023 ORTHO05D000014 3.9e-11 72.0 186 35.5
Hma1.2p1_0246F.1_g101770 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.9e-11 72.0 55 63.6
Hma1.2p1_0352F.1_g133020 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.1e-10 70.5 55 61.8
Hma1.2p1_1053F.1_g252400 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.1e-10 70.5 55 61.8
Rhsim05G0190500 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.5e-10 69.3 138 34.1
Rhsim08G0134200 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.3e-09 67.0 110 43.6
FvH4_6g28272 Fragaria vesca HOM05D000023 ORTHO05D000014 2.1e-09 66.2 52 55.8
FvH4_5g39742 Fragaria vesca HOM05D000023 ORTHO05D000014 4.8e-09 65.1 116 37.1
Rhsim05G0095900 Rhododendron simsii HOM05D009624 ORTHO05D017150 6.2e-09 64.7 110 42.7
RcHm_v2.0_Chr1g0314451 Rosa chinensis HOM05D000023 ORTHO05D000014 1.4e-08 63.5 118 38.1
Atru.chr3.1904 Acer truncatum HOM05D000023 ORTHO05D000014 5.3e-08 61.6 28 96.4
C08p10220 Brassica napus HOM05D000023 ORTHO05D000014 6.9e-08 61.2 155 35.5
Rhsim06G0097600 Rhododendron simsii HOM05D009624 ORTHO05D017150 6.9e-08 61.2 110 41.8
C01p38810 Brassica napus HOM05D000023 ORTHO05D014533 5.8e-07 58.2 141 34.8
Rhsim05G0091000 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.8e-07 58.2 81 39.5
BraA03t15322Z Brassica rapa HOM05D000023 ORTHO05D000014 7.6e-07 57.8 157 35.0
CARHR219480 Cardamine hirsuta HOM05D000023 ORTHO05D000014 2.2e-06 56.2 49 59.2
Rhsim02G0154200 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.9e-06 55.8 112 34.8
Rhsim01G0132500 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.8e-06 55.5 61 44.3
Rhsim06G0134600 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.5e-06 54.7 52 46.2
Rhsim10G0121900 Rhododendron simsii HOM05D000023 ORTHO05D000014 8.4e-06 54.3 54 48.1


User provided reference genes

Program Settings