Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.1601 Acer truncatum HOM05D006262 ORTHO05D007266 1.8e-254 882.1 455 100.0
Atru.chr3.1609 Acer truncatum HOM05D006262 ORTHO05D007266 1.8e-254 882.1 455 100.0
Ciclev10020134m.g Citrus clementina HOM05D006262 ORTHO05D007266 8.2e-146 521.2 458 67.9
Manes.04G048800 Manihot esculenta HOM05D006262 ORTHO05D007266 2.6e-123 446.4 444 59.7
Potri.007G124600 Populus trichocarpa HOM05D006262 ORTHO05D007266 3.6e-117 426.0 451 56.1
Thecc.05G002700 Theobroma cacao HOM05D006262 ORTHO05D007266 8.0e-117 424.9 434 57.8
Cfa015775 Carpinus fangiana HOM05D006262 ORTHO05D007266 5.9e-112 408.7 366 63.4
Duzib093G0344 Durio zibethinus HOM05D006262 ORTHO05D007266 1.0e-111 407.9 445 56.2
TWI63G1082 Tripterygium wilfordii HOM05D006262 ORTHO05D007266 2.9e-111 406.4 456 54.4
COL.COLO4_14416 Corchorus olitorius HOM05D006262 ORTHO05D007266 2.5e-110 403.3 427 56.9
PGR142G3389 Punica granatum HOM05D006262 ORTHO05D007266 1.3e-106 391.0 445 54.2
Gohir.D04G136100 Gossypium hirsutum HOM05D006262 ORTHO05D007266 2.9e-106 389.8 432 54.9
Dinv22693 Davidia involucrata HOM05D006262 ORTHO05D007266 6.4e-106 388.7 463 52.5
Gorai.012G119900 Gossypium raimondii HOM05D006262 ORTHO05D007266 1.4e-105 387.5 432 54.9
Gohir.A04G096300 Gossypium hirsutum HOM05D006262 ORTHO05D007266 9.2e-105 384.8 432 54.9
Sabra07G0100700 Salix brachista HOM05D006262 ORTHO05D002297 3.5e-104 382.9 442 53.2
CANSAT78G0581 Cannabis sativa HOM05D006262 ORTHO05D007266 1.1e-102 377.9 442 52.0
FvH4_4g11340 Fragaria vesca HOM05D006262 ORTHO05D007266 1.5e-102 377.5 424 55.2
QL10p047365 Quercus lobata HOM05D006262 ORTHO05D007266 2.5e-102 376.7 433 54.3
MD04G1038000 Malus domestica HOM05D006262 ORTHO05D007266 3.3e-102 376.3 394 57.6
BcaB01g03403 Brassica carinata HOM05D006262 ORTHO05D007266 4.3e-102 375.9 436 52.8
BraA03t11623Z Brassica rapa HOM05D006262 ORTHO05D007266 5.6e-102 375.6 423 53.4
TAR362G0090 Trochodendron aralioides HOM05D006262 ORTHO05D007266 5.6e-102 375.6 377 57.6
A03p24130 Brassica napus HOM05D006262 ORTHO05D007266 1.6e-101 374.0 423 53.0
C03p28720 Brassica napus HOM05D006262 ORTHO05D007266 2.3e-100 370.2 424 53.1
Thhalv10001453m.g Eutrema salsugineum HOM05D006262 ORTHO05D007266 2.3e-100 370.2 427 53.4
BcaC01g05249 Brassica carinata HOM05D006262 ORTHO05D007266 4.0e-100 369.4 423 53.0
BolC3t15234H Brassica oleracea HOM05D006262 ORTHO05D007266 6.8e-100 368.6 424 52.8
Hma1.2p1_0597F.1_g186430 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 8.9e-100 368.2 439 51.5
RcHm_v2.0_Chr4g0407651 Rosa chinensis HOM05D006262 ORTHO05D007266 1.2e-99 367.9 401 55.9
Prupe.1G187900 Prunus persica HOM05D006262 ORTHO05D007266 1.5e-99 367.5 367 58.6
CSS0049911 Camellia sinensis var. sinensis HOM05D006262 ORTHO05D007266 2.6e-99 366.7 391 53.5
Sp4g25360 Schrenkiella parvula HOM05D006262 ORTHO05D007266 7.5e-99 365.2 427 52.2
Eucgr.A00253 Eucalyptus grandis HOM05D006262 ORTHO05D007266 2.2e-98 363.6 344 59.9
DCAR_023918 Daucus carota HOM05D006262 ORTHO05D007266 2.9e-98 363.2 379 55.4
AT2G43235 Arabidopsis thaliana HOM05D006262 ORTHO05D007266 7.0e-97 358.6 440 50.5
Rhsim09G0030700 Rhododendron simsii HOM05D006262 ORTHO05D007266 2.7e-96 356.7 448 50.9
CARHR138310 Cardamine hirsuta HOM05D006262 ORTHO05D007266 7.8e-96 355.1 426 50.5
HanXRQChr15g0494811 Helianthus annuus HOM05D006262 ORTHO05D007266 5.0e-95 352.4 478 47.9
Carub.0004s2570 Capsella rubella HOM05D006262 ORTHO05D007266 3.3e-94 349.7 440 49.8
Glyma.20G245900 Glycine max HOM05D006262 ORTHO05D007266 1.2e-93 347.8 442 50.0
Cc03_g13170 Coffea canephora HOM05D006262 ORTHO05D007266 2.1e-93 347.1 440 48.2
AL4G41890 Arabidopsis lyrata HOM05D006262 ORTHO05D007266 6.2e-93 345.5 441 48.8
Lalb_Chr02g0144321 Lupinus albus HOM05D006262 ORTHO05D007266 3.1e-92 343.2 412 51.0
PGSC0003DMG400021613 Solanum tuberosum HOM05D006262 ORTHO05D007266 3.1e-92 343.2 457 47.9
Aa31LG1G25040 Aethionema arabicum HOM05D006262 ORTHO05D007266 4.0e-92 342.8 455 49.9
vmacro00601 Vaccinium macrocarpon HOM05D006262 ORTHO05D007266 4.0e-92 342.8 439 50.1
ClCG07G015820 Citrullus lanatus HOM05D006262 ORTHO05D007266 1.3e-90 337.8 426 49.1
CsaV3_4G003530 Cucumis sativus L. HOM05D006262 ORTHO05D007266 1.1e-89 334.7 433 47.6
Phvul.007G004000 Phaseolus vulgaris HOM05D006262 ORTHO05D007266 1.4e-89 334.3 445 47.2
MELO3C017699.2 Cucumis melo HOM05D006262 ORTHO05D007266 5.4e-89 332.4 430 47.9
ECA238G4140 Erigeron canadensis HOM05D000005 ORTHO05D000012 6.0e-88 328.9 382 53.4
Ca_29592_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 2.3e-87 327.0 419 48.9
Sed0004128 Sechium edule HOM05D006262 ORTHO05D007266 8.6e-87 325.1 463 45.4
Solyc09g098530.4 Solanum lycopersicum HOM05D006262 ORTHO05D007266 3.3e-86 323.2 471 45.4
Sopen09g036450 Solanum pennellii HOM05D006262 ORTHO05D007266 3.3e-86 323.2 449 46.3
Aqoxy2G04115 Aquilegia oxysepala HOM05D006262 ORTHO05D007266 7.3e-86 322.0 431 46.4
Lj5g0018354 Lotus japonicus HOM05D006262 ORTHO05D007266 9.5e-86 321.6 435 46.0
MBI08_g33651_MAGBIO Magnolia biondii HOM05D006262 ORTHO05D007266 3.6e-85 319.7 357 54.1
Lsat_1_v5_gn_2_51881 Lactuca sativa HOM05D006262 ORTHO05D007266 1.4e-84 317.8 468 45.3
VMungo0720G2273 Vigna mungo HOM05D006262 ORTHO05D007266 4.0e-84 316.2 444 45.0
EL10Ac3g06302 Beta vulgaris HOM05D006262 ORTHO05D007266 5.2e-84 315.8 407 48.6
Nn1g09825 Nelumbo nucifera HOM05D006262 ORTHO05D007266 5.2e-84 315.8 367 49.3
arahy.Tifrunner.gnm1.ann1.6Y9ITK Arachis hypogaea HOM05D006262 ORTHO05D007266 1.2e-83 314.7 351 53.0
PSO675G4698 Papaver somniferum HOM05D006262 ORTHO05D007266 4.4e-83 312.8 453 42.4
arahy.Tifrunner.gnm1.ann1.BL35NN Arachis hypogaea HOM05D006262 ORTHO05D007266 1.7e-82 310.8 346 53.8
Haze_00720 Corylus avellana HOM05D006262 ORTHO05D007266 2.2e-82 310.5 527 42.5
Medtr1g116540 Medicago truncatula HOM05D006262 ORTHO05D007266 7.1e-81 305.4 427 45.9
ATR0743G268 Amborella trichopoda HOM05D006262 ORTHO05D007266 1.6e-80 304.3 435 45.3
Sc13g0007690 Simmondsia chinensis HOM05D006262 ORTHO05D007266 2.7e-80 303.5 417 48.4
Lj3A232G38 Lonicera japonica HOM05D006262 ORTHO05D007266 7.8e-80 302.0 382 48.2
GSVIVG01013579001 Vitis vinifera HOM05D006262 ORTHO05D007266 1.0e-79 301.6 260 63.8
Ah.07g204100 Amaranthus hybridus HOM05D006262 ORTHO05D007266 1.3e-79 301.2 444 44.8
MSTRG.24585 Avicennia marina HOM05D006262 ORTHO05D007266 1.7e-79 300.8 428 43.5
PSO017G4626 Papaver somniferum HOM05D006262 ORTHO05D007266 1.7e-79 300.8 437 42.3
TPR.G10421 Trifolium pratense HOM05D006262 ORTHO05D007266 1.5e-78 297.7 412 46.1
Migut.N03113 Erythranthe guttata HOM05D006262 ORTHO05D007266 3.3e-78 296.6 427 43.1
SalBow6G1208 Salvia bowleyana HOM05D006262 ORTHO05D007266 2.4e-76 290.4 466 40.1
Hund22599 Selenicereus undatus HOM05D006262 ORTHO05D007266 3.4e-75 286.6 446 43.9
HPP92_024424 Vanilla planifolia HOM05D006262 ORTHO05D007266 1.3e-74 284.6 398 44.0
CDE09G0849 Ceratophyllum demersum HOM05D006262 ORTHO05D007266 3.5e-72 276.6 297 53.5
Psat6g241480 Pisum sativum HOM05D006262 ORTHO05D007266 1.3e-71 274.6 412 43.9
unitig_27.g25149 Utricularia gibba HOM05D006262 ORTHO05D007266 1.1e-68 265.0 371 41.8
Oeu029569.3 Olea europaea HOM05D006262 ORTHO05D007266 1.4e-68 264.6 500 38.6
Os05g0299200 Oryza sativa ssp. japonica HOM05D006262 ORTHO05D007266 8.4e-66 255.4 363 45.5
Ca_11400_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 2.3e-63 247.3 419 42.2
Zm00001eb350760 Zea mays HOM05D006262 ORTHO05D007266 2.3e-63 247.3 358 43.6
SEGI_17174 Sequoiadendron giganteum HOM05D006262 ORTHO05D007266 6.7e-63 245.7 370 44.9
Ca_11403_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 1.5e-62 244.6 414 42.3
CiPaw.01G102600 Carya illinoinensis HOM05D006262 ORTHO05D007266 3.2e-57 226.9 316 47.5
Nitab4.5_0002908g0080 Nicotiana tabacum HOM05D006262 ORTHO05D007266 1.0e-55 221.9 167 69.5
Peaxi162Scf00286g00119 Petunia axillaris HOM05D006262 ORTHO05D007266 3.0e-55 220.3 168 69.6
Nitab4.5_0001049g0110 Nicotiana tabacum HOM05D006262 ORTHO05D007266 5.1e-55 219.5 161 70.8
AUR62030023 Chenopodium quinoa HOM05D006262 ORTHO05D007266 1.1e-54 218.4 455 38.5
AagrBONN_evm.TU.Sc2ySwM_344.5117 Anthoceros agrestis HOM05D006262 ORTHO05D007266 2.5e-54 217.2 353 39.1
AUR62002605 Chenopodium quinoa HOM05D006262 ORTHO05D007266 8.2e-53 212.2 451 38.1
Mapoly0004s0159 Marchantia polymorpha HOM05D006262 ORTHO05D007266 2.8e-45 187.2 355 35.8
Hma1.2p1_0597F.1_g186420 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 4.1e-44 183.3 138 73.9
SMO351G0235 Selaginella moellendorffii HOM05D006262 ORTHO05D007266 1.5e-43 181.4 290 41.4
Cpa.g.sc71.28 Carica papaya HOM05D006262 ORTHO05D007266 2.0e-38 164.5 255 45.9
SGA_v2.0_scaffold31G12573 Striga asiatica HOM05D006262 ORTHO05D007266 4.3e-38 163.3 406 31.5
Pp3c12_3930 Physcomitrium patens HOM05D006262 ORTHO05D007266 1.7e-37 161.4 376 32.4
Pp3c9_3680 Physcomitrium patens HOM05D006262 ORTHO05D007266 9.7e-30 135.6 362 30.4
Nitab4.5_0001049g0100 Nicotiana tabacum HOM05D006262 ORTHO05D007266 1.2e-27 128.6 192 41.7
Nitab4.5_0002908g0070 Nicotiana tabacum HOM05D006262 ORTHO05D007266 2.6e-27 127.5 191 41.4
Cpa.g.sc71.30 Carica papaya HOM05D006262 ORTHO05D007266 2.2e-26 124.4 86 77.9
Hma1.2p1_0597F.1_g186440 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 2.7e-24 117.5 242 35.5
FAN17G0796 Fragaria x ananassa HOM05D006262 ORTHO05D007266 4.7e-24 116.7 82 72.0
QL09p046233 Quercus lobata HOM05D006262 ORTHO05D007266 2.0e-22 111.3 83 74.7
MCO03G554 Micromonas commoda HOM05D006262 ORTHO05D007266 8.2e-21 105.9 286 32.5
Peaxi162Scf00286g10017 Petunia axillaris HOM05D006262 ORTHO05D007266 3.1e-20 104.0 274 32.5
CAN.G688.4 Capsicum annuum HOM05D006262 ORTHO05D007266 3.2e-17 94.0 75 61.3
PRCOL_00005486 Prasinoderma coloniale HOM05D006262 ORTHO05D007266 3.2e-17 94.0 281 30.6
Cre01.g049900 Chlamydomonas reinhardtii HOM05D006262 ORTHO05D007266 1.2e-14 85.5 313 27.8
FAN07G2249 Fragaria x ananassa HOM05D006262 ORTHO05D007266 2.0e-11 74.7 46 80.4
CAN.G51.2 Capsicum annuum HOM05D006262 ORTHO05D007266 1.0e-10 72.4 75 52.0
GSVIVG01020265001 Vitis vinifera HOM05D006262 ORTHO05D007266 1.0e-10 72.4 106 41.5
FvH4_c17g00080 Fragaria vesca HOM05D006262 ORTHO05D007266 1.3e-10 72.0 56 66.1
FAN07G1916 Fragaria x ananassa HOM05D006262 ORTHO05D007266 2.9e-10 70.9 52 73.1
AagrBONN_evm.TU.Sc2ySwM_368.1862 Anthoceros agrestis HOM05D005935 ORTHO05D007012 1.1e-09 68.9 72 55.6
Glyma.10G295900 Glycine max HOM05D006262 ORTHO05D007266 1.2e-06 58.9 187 35.3
BraA10t42873Z Brassica rapa HOM05D006262 ORTHO05D007266 2.0e-06 58.2 246 28.9


User provided reference genes

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