Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 1.8e-176 622.5 307 100.0
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 1.8e-176 622.5 307 100.0
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 6.1e-153 544.3 307 84.7
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 3.0e-152 542.0 307 86.0
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 6.8e-152 540.8 307 84.4
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 4.4e-151 538.1 307 84.7
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 2.2e-150 535.8 307 84.4
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 2.8e-150 535.4 307 84.4
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 1.1e-149 533.5 307 85.0
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 1.6e-148 529.6 307 84.4
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 2.0e-148 529.3 307 84.0
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 4.5e-148 528.1 307 83.7
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 7.7e-148 527.3 307 84.0
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 7.7e-148 527.3 307 83.7
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 7.7e-148 527.3 307 83.4
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 1.0e-147 526.9 307 81.8
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 3.8e-147 525.0 307 83.1
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 5.0e-147 524.6 307 83.4
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 6.5e-147 524.2 288 87.5
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 1.1e-146 523.5 307 82.1
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 2.5e-146 522.3 307 83.1
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 3.2e-146 521.9 307 81.4
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 4.2e-146 521.5 307 83.1
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 4.2e-146 521.5 307 82.7
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 5.5e-146 521.2 307 81.1
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 9.4e-146 520.4 307 82.7
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.2e-145 520.0 307 82.4
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 2.7e-145 518.8 307 83.1
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 6.1e-145 517.7 307 81.1
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 3.0e-144 515.4 307 81.8
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 4.0e-144 515.0 307 80.8
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 8.8e-144 513.8 307 80.1
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 1.5e-143 513.1 307 79.5
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 2.6e-143 512.3 307 80.8
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 3.4e-143 511.9 307 81.1
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 5.7e-143 511.1 307 79.2
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 5.7e-143 511.1 307 79.8
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 7.5e-143 510.8 307 81.1
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 7.5e-143 510.8 307 81.4
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 9.8e-143 510.4 304 79.9
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 9.8e-143 510.4 307 81.1
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 1.3e-142 510.0 307 79.2
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 2.2e-142 509.2 307 80.8
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 2.8e-142 508.8 307 78.5
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 3.7e-142 508.4 307 80.8
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 3.7e-142 508.4 307 79.8
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 6.3e-142 507.7 307 82.1
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 6.3e-142 507.7 307 80.5
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 8.3e-142 507.3 307 80.8
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 2.4e-141 505.8 307 79.8
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 2.4e-141 505.8 307 80.1
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 4.1e-141 505.0 307 78.2
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 5.4e-141 504.6 307 80.5
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 1.6e-140 503.1 307 78.2
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 5.9e-140 501.1 307 79.2
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 5.9e-140 501.1 358 71.5
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 7.7e-140 500.7 307 77.2
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 7.7e-140 500.7 307 79.5
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.3e-139 500.0 323 77.1
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 2.3e-139 499.2 307 78.2
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 2.9e-139 498.8 306 76.5
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 5.0e-139 498.0 307 79.5
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 6.6e-139 497.7 307 75.9
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 4.7e-137 491.5 307 74.6
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 6.1e-137 491.1 306 74.8
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 4.0e-136 488.4 370 67.8
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 8.9e-136 487.3 307 75.2
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 4.4e-135 485.0 391 65.2
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 2.9e-134 482.3 371 66.0
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 1.6e-132 476.5 307 74.9
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.6e-129 466.5 285 80.4
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 2.0e-127 459.5 293 78.2
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 2.2e-126 456.1 277 77.6
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 4.9e-126 454.9 277 79.8
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 9.2e-125 450.7 278 77.0
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.2e-124 450.3 274 79.9
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 1.2e-124 450.3 307 73.9
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 1.0e-123 447.2 307 72.3
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 1.7e-123 446.4 277 76.5
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 6.6e-123 444.5 293 75.1
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 9.2e-117 424.1 310 65.5
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 3.1e-112 409.1 310 63.5
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 6.8e-112 407.9 243 81.1
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 4.4e-111 405.2 235 83.4
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 1.2e-108 397.1 307 67.8
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 1.0e-107 394.0 306 60.8
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 7.6e-103 377.9 273 65.2
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 4.9e-102 375.2 236 75.8
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 1.8e-83 313.5 316 50.6
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 1.9e-77 293.5 190 70.5
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 7.1e-77 291.6 245 61.6
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 9.1e-64 248.1 131 89.3
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 1.6e-60 237.3 310 42.9
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 8.8e-59 231.5 565 29.6
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 9.1e-56 221.5 282 44.0
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.7e-54 217.2 170 67.6
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.6e-52 210.7 148 70.3
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 3.5e-23 113.2 96 51.0
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.7e-22 110.9 222 33.8
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 7.3e-21 105.5 88 63.6
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 7.3e-21 105.5 77 62.3
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 1.3e-17 94.7 126 46.8
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 3.5e-07 60.1 53 62.3
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 4.6e-07 59.7 39 74.4


User provided reference genes

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