Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.1554 Acer truncatum HOM05D000002 ORTHO05D000047 1.8e-71 272.3 125 100.0
Hma1.2p1_0210F.1_g089480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.1e-14 82.8 105 40.0
Hma1.2p1_3882F.1_g337890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.1e-14 82.8 111 43.2
CANSAT25G0968 Cannabis sativa HOM05D000002 ORTHO05D000047 2.3e-13 79.3 121 38.0
CSS0050398 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.9e-13 78.6 92 45.7
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-13 78.2 92 45.7
CSS0011005 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-13 78.2 92 45.7
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-13 78.2 92 45.7
CSS0032452 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-13 78.2 92 45.7
CSS0038278 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-13 78.2 92 45.7
CSS0041031 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-13 78.2 92 45.7
CSS0048989 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-13 78.2 92 45.7
Hma1.2p1_0359F.1_g135490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.1e-13 78.2 132 37.1
CSS0004866 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.6e-13 77.8 92 45.7
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.6e-13 77.4 92 45.7
SHI23105 Sapria himalayana HOM05D000002 ORTHO05D000047 8.6e-13 77.4 110 43.6
CSS0017511 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.5e-12 75.9 92 44.6
Hma1.2p1_0812F.1_g222220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-12 75.9 75 46.7
CSS0004984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-12 74.7 92 44.6
CSS0010335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.6e-12 74.7 95 44.2
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-12 74.7 95 44.2
Hma1.2p1_1551F.1_g290170 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.6e-11 73.2 114 36.8
CSS0001250 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-11 72.8 92 44.6
CSS0024170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-11 72.8 92 44.6
CSS0039193 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.1e-11 72.8 92 44.6
Hma1.2p1_0744F.1_g211780 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.1e-11 72.8 91 40.7
TWI23G0973 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 2.8e-11 72.4 130 38.5
CSS0001169 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.6e-11 72.0 105 40.0
Hma1.2p1_0349F.1_g132140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.6e-11 72.0 115 36.5
Hma1.2p1_1043F.1_g251210 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.6e-11 72.0 99 45.5
Hma1.2p1_1349F.1_g277350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.6e-11 72.0 91 40.7
Hma1.2p1_0706F.1_g207010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.2e-11 71.2 102 43.1
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.1e-11 70.9 123 35.8
CSS0012133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.1e-11 70.9 123 35.8
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.1e-11 70.9 123 35.8
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.1e-11 70.9 123 35.8
CSS0034457 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.1e-11 70.9 123 35.8
CSS0036528 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.1e-11 70.9 123 35.8
CSS0043797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.1e-11 70.9 123 35.8
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.1e-11 70.9 123 35.8
Hma1.2p1_0270F.1_g108600 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.1e-11 70.9 91 39.6
Nn5g30897 Nelumbo nucifera HOM05D000002 ORTHO05D000047 8.1e-11 70.9 105 40.0
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-10 70.5 123 35.8
Hma1.2p1_0503F.1_g168050 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-10 70.5 112 35.7
Nn2g11309 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.1e-10 70.5 105 40.0
Hma1.2p1_0062F.1_g034230 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-10 70.1 121 39.7
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.8e-10 69.7 123 35.0
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.8e-10 69.7 123 35.0
CSS0019500 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.3e-10 69.3 123 35.0
Hma1.2p1_1549F.1_g290080 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.3e-10 69.3 85 40.0
Hma1.2p1_0868F.1_g230500 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.1e-10 68.9 101 35.6
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.0e-10 68.6 123 35.0
CSS0029966 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.0e-10 68.6 95 41.1
Hma1.2p1_0004F.1_g004100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.0e-10 68.6 117 35.9
Hma1.2p1_0018F.1_g013420 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.0e-10 68.6 101 38.6
CSS0008463 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.2e-10 68.2 107 42.1
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-10 68.2 108 37.0
Hma1.2p1_1513F.1_g288010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.8e-10 67.8 101 39.6
Nn7g38028 Nelumbo nucifera HOM05D000002 ORTHO05D000047 6.8e-10 67.8 105 38.1
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 8.9e-10 67.4 103 35.9
Gorai.007G344200 Gossypium raimondii HOM05D000002 ORTHO05D000047 8.9e-10 67.4 56 48.2
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.9e-10 67.4 115 35.7
SHI48864 Sapria himalayana HOM05D000002 ORTHO05D000001 8.9e-10 67.4 98 39.8
CSS0017533 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-09 67.0 123 34.1
CSS0022055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-09 66.6 49 57.1
Hma1.2p1_0316F.1_g123090 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.5e-09 66.6 84 46.4
Nn1g06938 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.5e-09 66.6 97 37.1
CSS0000858 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-09 66.2 49 57.1
CSS0007796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-09 66.2 49 57.1
CSS0033236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-09 66.2 49 57.1
CSS0037461 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-09 66.2 49 57.1
CSS0038170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-09 66.2 49 57.1
Hma1.2p1_2309F.1_g319500 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.0e-09 66.2 114 35.1
CANSAT54G2576 Cannabis sativa HOM05D000002 ORTHO05D000047 3.4e-09 65.5 103 35.0
Cpa.g.sc15.70 Carica papaya HOM05D000002 ORTHO05D000047 3.4e-09 65.5 70 45.7
Cpa.g.sc176.9 Carica papaya HOM05D000002 ORTHO05D000047 3.4e-09 65.5 97 37.1
Hma1.2p1_0668F.1_g199811 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.4e-09 65.5 83 43.4
Cpa.g.sc3.386 Carica papaya HOM05D000002 ORTHO05D000047 4.4e-09 65.1 51 52.9
Oeu026778.1 Olea europaea HOM05D000002 ORTHO05D000001 4.4e-09 65.1 92 34.8
CSS0027817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.5e-09 64.3 49 57.1
Hma1.2p1_0526F.1_g172830 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.5e-09 64.3 112 39.3
Hma1.2p1_0628F.1_g191990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.5e-09 64.3 60 46.7
Hma1.2p1_1113F.1_g258670 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.5e-09 64.3 82 37.8
Oeu044270.1 Olea europaea HOM05D000002 ORTHO05D000047 7.5e-09 64.3 77 39.0
Hma1.2p1_0062F.1_g034270 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.9e-09 63.9 91 37.4
Hma1.2p1_0217F.1_g091730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.9e-09 63.9 51 52.9
GSVIVG01038208001 Vitis vinifera HOM05D000002 ORTHO05D000047 9.9e-09 63.9 108 37.0
Hma1.2p1_0172F.1_g076300 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-08 63.5 125 37.6
Hma1.2p1_0183F.1_g081030 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-08 63.5 132 34.1
Hma1.2p1_0722F.1_g208760 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-08 63.5 51 52.9
Hma1.2p1_0036F.1_g023540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-08 63.2 83 38.6
Cpa.g.sc29.59 Carica papaya HOM05D000002 ORTHO05D000047 2.2e-08 62.8 45 57.8
Cpa.g.sc15.92 Carica papaya HOM05D001549 ORTHO05D003098 3.7e-08 62.0 50 54.0
Cpa.g.sc25.53 Carica papaya HOM05D000002 ORTHO05D000047 3.7e-08 62.0 45 55.6
Cpa.g.sc58.26 Carica papaya HOM05D000002 ORTHO05D000047 3.7e-08 62.0 50 58.0
Hma1.2p1_0072F.1_g038350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.4e-08 61.2 57 49.1
Hma1.2p1_0247F.1_g101820 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.4e-08 61.2 50 54.0
SHI20908 Sapria himalayana HOM05D000023 ORTHO05D000014 8.3e-08 60.8 53 43.4
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-07 60.5 114 37.7
Cpa.g.sc54.36 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-07 60.1 52 50.0
Nn5g30282 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.4e-07 60.1 30 73.3
Oeu052091.1 Olea europaea HOM05D000002 ORTHO05D000001 1.4e-07 60.1 57 42.1
Cpa.g.sc28.123 Carica papaya HOM05D000207 ORTHO05D000047 1.9e-07 59.7 45 55.6
Nn1g04145 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.9e-07 59.7 71 42.3
Cpa.g.sc12.143 Carica papaya HOM05D000002 ORTHO05D000047 2.4e-07 59.3 52 51.9
Ca_11532_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 3.2e-07 58.9 89 36.0
Cpa.g.sc133.6 Carica papaya HOM05D000002 ORTHO05D000047 5.4e-07 58.2 45 53.3
MELO3C028461.2 Cucumis melo HOM05D011127 ORTHO05D000047 5.4e-07 58.2 45 53.3
Hma1.2p1_0232F.1_g097650 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.4e-07 58.2 64 42.2
Hma1.2p1_0589F.1_g184740 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 5.4e-07 58.2 71 46.5
ClCG00G000760 Citrullus lanatus HOM05D000002 ORTHO05D000001 9.2e-07 57.4 34 61.8
Hma1.2p1_0074F.1_g038980 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.2e-07 57.4 64 42.2
Hma1.2p1_0530F.1_g173310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.2e-07 57.4 34 55.9
Potri.001G247404 Populus trichocarpa HOM05D000002 ORTHO05D000047 9.2e-07 57.4 97 36.1
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 1.2e-06 57.0 98 33.7
CiPaw.01G278500 Carya illinoinensis HOM05D000002 ORTHO05D000001 1.2e-06 57.0 84 41.7
Cpa.g.sc5.346 Carica papaya HOM05D000002 ORTHO05D000047 1.6e-06 56.6 45 51.1
Hma1.2p1_0069F.1_g037490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.6e-06 56.6 65 43.1
Hma1.2p1_0378F.1_g139783 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.1e-06 56.2 69 42.0
Hma1.2p1_0668F.1_g199820 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.1e-06 56.2 69 42.0
Hma1.2p1_0053F.1_g030910 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.0e-06 54.7 99 37.4
Hma1.2p1_1207F.1_g267040 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.0e-06 54.7 67 41.8
Cpa.g.sc122.32 Carica papaya HOM05D000002 ORTHO05D000047 7.8e-06 54.3 45 48.9
Cpa.g.sc24.57 Carica papaya HOM05D000002 ORTHO05D000047 7.8e-06 54.3 28 64.3
SHI26944 Sapria himalayana HOM05D000002 ORTHO05D000047 7.8e-06 54.3 51 51.0
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 7.8e-06 54.3 96 38.5


User provided reference genes

Program Settings