Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.1539 Acer truncatum HOM05D008213 ORTHO05D009787 2.1e-68 262.3 141 100.0
Manes.11G119400 Manihot esculenta HOM05D008213 ORTHO05D009787 3.3e-21 105.5 150 43.3
Thecc.04G185000 Theobroma cacao HOM05D008213 ORTHO05D009787 4.4e-21 105.1 159 40.9
Duzib151G0756 Durio zibethinus HOM05D008213 ORTHO05D009787 2.4e-19 99.4 160 39.4
QL10p048331 Quercus lobata HOM05D008213 ORTHO05D009787 6.9e-19 97.8 129 45.0
Dinv44200 Davidia involucrata HOM05D008213 ORTHO05D009787 1.2e-18 97.1 149 43.6
Ciclev10023340m.g Citrus clementina HOM05D008213 ORTHO05D009787 3.8e-17 92.0 135 47.4
Prupe.1G190600 Prunus persica HOM05D008213 ORTHO05D009787 1.9e-16 89.7 132 44.7
CiPaw.01G101800 Carya illinoinensis HOM05D008213 ORTHO05D009787 5.5e-16 88.2 128 43.0
GSVIVG01010744001 Vitis vinifera HOM05D008213 ORTHO05D009787 6.7e-14 81.3 108 43.5
Gohir.D02G016500 Gossypium hirsutum HOM05D008213 ORTHO05D009787 5.7e-13 78.2 107 42.1
Gorai.005G020000 Gossypium raimondii HOM05D008213 ORTHO05D009787 9.7e-13 77.4 107 42.1
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 1.7e-12 76.6 94 45.7
AL4G26740 Arabidopsis lyrata HOM05D008213 ORTHO05D009787 4.8e-12 75.1 96 46.9
THA.LOC104826192 Tarenaya hassleriana HOM05D008213 ORTHO05D009787 4.8e-12 75.1 175 35.4
AT1G05894 Arabidopsis thaliana HOM05D008213 ORTHO05D009787 8.2e-12 74.3 128 37.5
A05p14130 Brassica napus HOM05D008213 ORTHO05D009787 1.8e-11 73.2 154 37.0
C04p18480 Brassica napus HOM05D008213 ORTHO05D009787 1.8e-11 73.2 154 37.0
BraA05t20342Z Brassica rapa HOM05D008213 ORTHO05D009787 1.8e-11 73.2 154 37.0
Carub.0001s0526 Capsella rubella HOM05D008213 ORTHO05D009787 2.4e-11 72.8 131 39.7
A04p24240 Brassica napus HOM05D008213 ORTHO05D009787 4.1e-11 72.0 95 48.4
BcaC02g11256 Brassica carinata HOM05D008213 ORTHO05D009787 5.3e-11 71.6 154 36.4
BolC4t23398H Brassica oleracea HOM05D008213 ORTHO05D009787 5.3e-11 71.6 154 36.4
Carub.0004s1279 Capsella rubella HOM05D008213 ORTHO05D009787 7.0e-11 71.2 96 45.8
AL1G15840 Arabidopsis lyrata HOM05D008213 ORTHO05D009787 9.1e-11 70.9 97 41.2
AT2G31480 Arabidopsis thaliana HOM05D008213 ORTHO05D009787 1.2e-10 70.5 96 45.8
BraA04t17943Z Brassica rapa HOM05D008213 ORTHO05D009787 1.2e-10 70.5 95 47.4
Thhalv10017539m.g Eutrema salsugineum HOM05D008213 ORTHO05D009787 1.2e-10 70.5 96 45.8
Potri.007G127200 Populus trichocarpa HOM05D008213 ORTHO05D009787 1.2e-10 70.5 86 47.7
CARHR005430 Cardamine hirsuta HOM05D008213 ORTHO05D009787 2.0e-10 69.7 98 42.9
Sp4g13940 Schrenkiella parvula HOM05D008213 ORTHO05D009787 2.0e-10 69.7 96 45.8
BcaC02g07992 Brassica carinata HOM05D008213 ORTHO05D009787 2.6e-10 69.3 95 46.3
C04p60980 Brassica napus HOM05D008213 ORTHO05D009787 2.6e-10 69.3 95 46.3
CARHR125120 Cardamine hirsuta HOM05D008213 ORTHO05D009787 2.6e-10 69.3 117 38.5
BcaB02g10392 Brassica carinata HOM05D008213 ORTHO05D009787 3.5e-10 68.9 125 40.0
Sabra07G0103200 Salix brachista HOM05D008213 ORTHO05D009787 4.5e-10 68.6 106 42.5
BcaB06g28538 Brassica carinata HOM05D008213 ORTHO05D009787 7.7e-10 67.8 96 44.8
Sp1g04730 Schrenkiella parvula HOM05D008213 ORTHO05D009787 1.0e-09 67.4 91 41.8
Thhalv10009329m.g Eutrema salsugineum HOM05D008213 ORTHO05D009787 2.9e-09 65.9 97 39.2
RcHm_v2.0_Chr4g0407081 Rosa chinensis HOM05D008213 ORTHO05D009787 8.5e-09 64.3 111 38.7
BcaC07g36821 Brassica carinata HOM05D008213 ORTHO05D009787 1.1e-08 63.9 98 40.8
C08p02290 Brassica napus HOM05D008213 ORTHO05D009787 1.1e-08 63.9 98 40.8
Cpa.g.sc71.7 Carica papaya HOM05D008213 ORTHO05D009787 1.9e-08 63.2 84 39.3
Hma1.2p1_0754F.1_g213080 Hydrangea macrophylla HOM05D008213 ORTHO05D009787 2.5e-08 62.8 118 42.4
TAR362G1061 Trochodendron aralioides HOM05D008213 ORTHO05D009787 2.5e-08 62.8 96 39.6
BolC8t47021H Brassica oleracea HOM05D008213 ORTHO05D009787 4.2e-08 62.0 98 39.8
A08p36230 Brassica napus HOM05D008213 ORTHO05D009787 7.2e-08 61.2 99 41.4
BraA08t35527Z Brassica rapa HOM05D008213 ORTHO05D009787 7.2e-08 61.2 99 41.4
Glyma.12G053300 Glycine max HOM05D010840 ORTHO05D009787 1.6e-07 60.1 128 32.0
BcaB02g10393 Brassica carinata HOM05D008213 ORTHO05D009787 2.1e-07 59.7 107 37.4
CSS0004350 Camellia sinensis var. sinensis HOM05D008213 ORTHO05D009787 2.7e-07 59.3 91 37.4
arahy.Tifrunner.gnm1.ann1.0UQ2B1 Arachis hypogaea HOM05D010840 ORTHO05D009787 3.6e-07 58.9 100 38.0
Aa31LG1G8440 Aethionema arabicum HOM05D008213 ORTHO05D009787 4.7e-07 58.5 133 36.8
COL.COLO4_24404 Corchorus olitorius HOM05D008213 ORTHO05D009787 6.1e-07 58.2 116 38.8
arahy.Tifrunner.gnm1.ann1.JQ8CCA Arachis hypogaea HOM05D010840 ORTHO05D009787 1.0e-06 57.4 100 37.0
VMungo1080G1829 Vigna mungo HOM05D002632 ORTHO05D002881 1.4e-06 57.0 75 42.7
Aqoxy5G00188 Aquilegia oxysepala HOM05D008213 ORTHO05D009787 2.3e-06 56.2 140 30.0
DCAR_017617 Daucus carota HOM05D008213 ORTHO05D009787 5.2e-06 55.1 110 33.6
BcaC02g11257 Brassica carinata HOM05D008213 ORTHO05D009787 6.7e-06 54.7 93 35.5


User provided reference genes

Program Settings