Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 2.1e-169 599.0 310 100.0
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 1.7e-118 429.9 247 85.0
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 1.4e-117 426.8 247 85.4
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 5.5e-117 424.9 247 85.0
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 1.2e-116 423.7 243 86.4
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 1.2e-116 423.7 247 84.6
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 1.0e-115 420.6 247 85.8
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 2.3e-115 419.5 246 84.6
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 1.5e-114 416.8 247 83.4
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 2.5e-114 416.0 242 84.7
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 4.3e-114 415.2 240 85.4
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 5.6e-114 414.8 247 81.8
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 7.4e-114 414.5 242 84.7
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 1.3e-113 413.7 247 82.6
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 1.6e-113 413.3 247 83.8
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 2.8e-113 412.5 245 83.7
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 4.8e-113 411.8 245 81.6
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 1.8e-112 409.8 245 82.4
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 1.8e-112 409.8 247 81.4
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 3.1e-112 409.1 247 82.6
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 4.0e-112 408.7 246 81.3
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 5.3e-112 408.3 247 82.6
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 9.0e-112 407.5 243 81.1
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 1.0e-110 404.1 243 80.2
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 2.9e-110 402.5 245 80.0
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 2.9e-110 402.5 245 80.0
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 2.9e-110 402.5 252 77.0
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 3.8e-110 402.1 252 76.6
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 3.8e-110 402.1 252 76.6
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 6.5e-110 401.4 245 79.6
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 1.1e-109 400.6 245 81.2
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 1.1e-109 400.6 247 79.8
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 1.4e-109 400.2 246 80.1
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 1.9e-109 399.8 245 80.0
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 2.5e-109 399.4 245 79.6
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 2.5e-109 399.4 245 79.2
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 3.2e-109 399.1 244 82.0
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 4.2e-109 398.7 247 78.9
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 1.6e-108 396.7 246 80.1
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 2.1e-108 396.4 257 76.7
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 2.7e-108 396.0 245 78.4
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 4.6e-108 395.2 247 76.1
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 4.6e-108 395.2 245 78.8
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 6.0e-108 394.8 249 79.1
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 7.9e-108 394.4 247 78.5
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.8e-107 393.3 246 77.2
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 2.3e-107 392.9 244 77.9
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 2.3e-107 392.9 244 77.9
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 3.0e-107 392.5 247 79.4
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 3.0e-107 392.5 245 78.8
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 3.9e-107 392.1 245 78.0
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 3.9e-107 392.1 249 75.9
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 5.1e-107 391.7 247 77.7
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 5.1e-107 391.7 252 79.0
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 6.7e-107 391.3 247 77.3
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 6.7e-107 391.3 247 77.3
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 6.7e-107 391.3 247 77.3
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 1.1e-106 390.6 245 78.0
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 1.5e-106 390.2 247 77.3
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 2.5e-106 389.4 247 76.5
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 2.5e-106 389.4 247 77.3
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 7.4e-106 387.9 247 76.1
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 9.7e-106 387.5 245 78.0
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 1.3e-105 387.1 245 78.4
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 2.8e-105 386.0 245 77.6
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 3.1e-104 382.5 264 72.7
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 5.3e-104 381.7 247 76.5
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 9.0e-104 380.9 247 75.7
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 9.0e-104 380.9 245 75.1
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 4.5e-103 378.6 245 77.6
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 1.3e-102 377.1 245 78.0
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 1.9e-101 373.2 246 75.2
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 7.2e-101 371.3 245 75.5
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 1.3e-99 367.1 246 74.4
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 1.8e-99 366.7 236 75.4
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.5e-98 363.6 240 72.1
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 4.8e-97 358.6 245 71.0
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 3.1e-96 355.9 203 87.2
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 1.2e-95 354.0 252 69.4
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 5.0e-94 348.6 203 84.7
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 2.5e-93 346.3 213 82.2
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 3.6e-92 342.4 203 83.7
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 3.6e-92 342.4 246 67.9
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 1.4e-91 340.5 245 68.2
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 1.8e-91 340.1 245 68.2
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 3.9e-91 339.0 217 77.0
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 6.7e-91 338.2 242 69.4
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 2.8e-89 332.8 245 67.3
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 9.1e-88 327.8 184 89.7
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 1.2e-87 327.4 245 69.0
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 2.6e-87 326.2 246 70.3
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 3.4e-87 325.9 198 76.3
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 1.3e-86 323.9 246 64.6
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 5.7e-82 308.5 202 78.2
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 2.2e-81 306.6 196 73.5
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 2.7e-76 289.7 252 61.5
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 2.3e-75 286.6 258 63.2
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 2.2e-73 280.0 246 60.6
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 1.9e-69 266.9 257 52.9
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 1.2e-66 257.7 242 51.7
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 2.4e-64 250.0 238 55.0
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 5.9e-63 245.4 158 75.3
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 8.0e-60 235.0 239 50.6
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 6.8e-59 231.9 202 63.4
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.5e-58 230.7 242 46.3
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 3.6e-52 209.5 153 66.7
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 8.0e-52 208.4 161 65.2
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 3.0e-51 206.5 153 66.0
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 4.9e-49 199.1 157 60.5
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 9.2e-48 194.9 118 81.4
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 2.7e-47 193.4 122 73.0
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 1.0e-46 191.4 117 81.2
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 2.5e-37 160.2 119 68.9
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 1.7e-33 147.5 102 70.6
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 8.3e-33 145.2 95 74.7
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 2.4e-32 143.7 219 40.6
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 1.0e-30 138.3 91 71.4
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 7.6e-18 95.5 73 64.4
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 3.2e-16 90.1 154 44.2
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 1.2e-07 61.6 39 66.7
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 7.9e-07 58.9 38 81.6


User provided reference genes

Program Settings