Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 5.8e-149 531.2 330 100.0
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 5.8e-149 531.2 330 100.0
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 6.4e-108 394.8 327 72.8
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 1.1e-107 394.0 330 69.7
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 7.1e-107 391.3 330 70.3
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 3.5e-106 389.0 336 68.8
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 7.4e-104 381.3 330 67.9
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 1.4e-102 377.1 331 74.3
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 2.9e-100 369.4 327 68.2
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 4.2e-99 365.5 324 66.4
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 4.2e-99 365.5 327 67.9
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 5.5e-99 365.2 330 66.4
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 1.6e-98 363.6 330 65.8
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.6e-98 363.6 327 67.3
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 4.6e-98 362.1 326 70.9
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 6.0e-98 361.7 326 66.9
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 7.9e-98 361.3 324 69.8
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 1.0e-97 360.9 332 66.0
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 1.0e-97 360.9 323 73.4
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 2.3e-97 359.8 330 71.5
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 4.3e-96 355.5 326 63.5
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 4.3e-96 355.5 329 67.2
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 7.4e-96 354.8 331 65.6
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 7.4e-96 354.8 325 68.9
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 1.3e-95 354.0 325 62.5
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 2.8e-95 352.8 329 66.0
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 3.7e-95 352.4 326 62.0
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 8.2e-95 351.3 332 65.1
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 3.1e-94 349.4 327 64.5
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 3.1e-94 349.4 330 63.0
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 6.9e-94 348.2 326 63.5
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 3.4e-93 345.9 324 64.2
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 1.0e-92 344.4 324 63.6
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 1.7e-92 343.6 326 69.0
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 1.7e-92 343.6 324 63.6
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 1.7e-92 343.6 323 65.9
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 5.0e-92 342.0 326 71.2
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 1.1e-91 340.9 330 60.6
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.9e-91 340.1 325 64.6
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 4.2e-91 339.0 325 64.6
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 5.5e-91 338.6 326 66.3
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 2.1e-90 336.7 336 61.9
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 2.7e-90 336.3 331 63.1
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 6.1e-90 335.1 325 68.6
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 6.1e-90 335.1 326 62.9
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 6.1e-90 335.1 330 65.8
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 2.3e-89 333.2 339 61.1
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 6.7e-89 331.6 336 66.4
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 1.5e-88 330.5 333 61.9
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 7.4e-88 328.2 359 54.3
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 1.6e-87 327.0 329 57.4
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 4.8e-87 325.5 326 67.5
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 1.4e-86 323.9 326 60.1
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 4.1e-86 322.4 326 64.4
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 5.3e-86 322.0 327 61.5
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 2.0e-85 320.1 354 53.7
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 2.6e-85 319.7 326 62.3
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 5.9e-85 318.5 326 61.3
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 1.3e-84 317.4 320 61.9
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 3.8e-84 315.8 328 67.4
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 6.5e-84 315.1 328 68.3
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 6.5e-84 315.1 328 68.3
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 1.1e-83 314.3 328 61.9
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 1.4e-83 313.9 319 61.4
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 1.9e-83 313.5 328 61.0
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 2.5e-83 313.2 325 63.7
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 3.2e-83 312.8 327 60.9
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 4.2e-83 312.4 328 67.7
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 1.2e-82 310.8 328 60.4
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 3.6e-82 309.3 325 59.7
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 4.6e-82 308.9 320 61.6
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 1.4e-81 307.4 322 59.6
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 1.8e-81 307.0 342 48.8
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 3.9e-81 305.8 326 60.4
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 8.8e-81 304.7 354 51.1
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 1.1e-80 304.3 323 60.4
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 2.5e-80 303.1 322 65.5
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 3.3e-80 302.8 324 59.9
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 3.1e-78 296.2 316 63.6
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 5.3e-78 295.4 326 58.6
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 2.6e-77 293.1 330 56.4
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 3.4e-77 292.7 316 63.3
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 1.0e-76 291.2 325 60.6
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 2.2e-76 290.0 331 52.6
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 5.0e-76 288.9 325 58.8
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 6.5e-76 288.5 326 58.9
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 4.2e-75 285.8 330 54.8
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 4.2e-75 285.8 316 61.4
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 4.2e-75 285.8 313 59.4
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 9.4e-75 284.6 327 57.8
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 1.4e-73 280.8 324 64.2
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 2.0e-72 276.9 291 63.2
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 2.4e-70 270.0 330 51.8
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 9.4e-67 258.1 282 64.5
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 2.3e-65 253.4 324 55.6
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 5.9e-61 238.8 333 56.5
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 2.5e-59 233.4 318 57.9
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 2.0e-56 223.8 173 60.7
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 2.6e-56 223.4 314 51.3
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 2.6e-56 223.4 206 55.3
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 8.3e-55 218.4 206 62.1
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.1e-54 218.0 204 52.9
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.7e-53 213.4 204 52.5
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 4.2e-51 206.1 174 56.3
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 1.0e-49 201.4 256 43.0
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.4e-49 201.1 211 49.8
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 2.8e-47 193.4 170 57.1
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 4.9e-47 192.6 210 48.1
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 7.7e-45 185.3 230 47.4
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 2.3e-44 183.7 211 57.8
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 2.9e-44 183.3 170 54.1
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 8.6e-44 181.8 176 54.0
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 1.8e-33 147.5 210 67.1
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.3e-33 147.1 166 48.8
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 3.7e-31 139.8 103 65.0
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 5.4e-30 136.0 106 61.3
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 1.3e-28 131.3 336 43.5
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 1.3e-23 114.8 82 67.1
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 4.9e-23 112.8 256 28.5
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 8.3e-23 112.1 176 43.2
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 1.1e-22 111.7 77 67.5
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 1.0e-20 105.1 75 64.0
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 5.1e-20 102.8 88 58.0
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 3.6e-18 96.7 253 42.7
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 6.8e-17 92.4 61 67.2
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 6.8e-17 92.4 128 41.4
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 6.0e-13 79.3 347 26.8
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 8.1e-10 68.9 58 56.9


User provided reference genes

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