Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.1466 Acer truncatum HOM05D004337 ORTHO05D005422 0.0e+00 1179.9 595 100.0
Ciclev10025224m.g Citrus clementina HOM05D004337 ORTHO05D005422 3.7e-295 1017.7 574 85.5
CiPaw.15G184900 Carya illinoinensis HOM05D004337 ORTHO05D005422 8.7e-289 996.5 575 83.8
Manes.12G081000 Manihot esculenta HOM05D004337 ORTHO05D005422 7.4e-288 993.4 571 83.2
Cfa020919 Carpinus fangiana HOM05D004337 ORTHO05D005422 2.1e-287 991.9 578 83.7
Potri.004G134500 Populus trichocarpa HOM05D004337 ORTHO05D005422 1.8e-286 988.8 572 83.4
Potri.T045800 Populus trichocarpa HOM05D004337 ORTHO05D005422 3.1e-286 988.0 572 83.4
Sabra04G0083600 Salix brachista HOM05D004337 ORTHO05D005422 4.0e-286 987.6 576 82.5
Potri.018G137500 Populus trichocarpa HOM05D004337 ORTHO05D005422 9.0e-286 986.5 572 83.2
Dinv09624 Davidia involucrata HOM05D004337 ORTHO05D005422 6.5e-284 980.3 572 83.2
Actinidia36582 Actinidia chinensis HOM05D004337 ORTHO05D005422 1.1e-283 979.5 573 82.4
TAR376G0777 Trochodendron aralioides HOM05D004337 ORTHO05D005422 1.1e-283 979.5 598 80.3
MD15G1140200 Malus domestica HOM05D004337 ORTHO05D005422 2.5e-283 978.4 581 81.4
Thecc.01G146600 Theobroma cacao HOM05D004337 ORTHO05D005422 2.5e-283 978.4 571 82.3
MELO3C003282.2 Cucumis melo HOM05D004337 ORTHO05D005422 7.1e-283 976.9 575 82.3
QL10p037473 Quercus lobata HOM05D004337 ORTHO05D005422 1.2e-282 976.1 574 82.1
Prupe.4G286100 Prunus persica HOM05D004337 ORTHO05D005422 2.3e-281 971.8 575 82.1
Gohir.D04G040600 Gossypium hirsutum HOM05D004337 ORTHO05D005422 3.0e-281 971.5 571 82.0
Gorai.012G045800 Gossypium raimondii HOM05D004337 ORTHO05D005422 3.0e-281 971.5 571 82.0
MBI06_g32147_MAGBIO Magnolia biondii HOM05D004337 ORTHO05D005422 5.1e-281 970.7 582 80.2
Gohir.A05G375100 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.1e-280 969.5 571 82.0
Gohir.A12G002300 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.5e-280 969.1 570 81.8
CsaV3_4G030000 Cucumis sativus L. HOM05D004337 ORTHO05D005422 2.5e-280 968.4 571 82.1
Aqoxy5G01850 Aquilegia oxysepala HOM05D004337 ORTHO05D005422 3.7e-279 964.5 579 80.7
GSVIVG01000243001 Vitis vinifera HOM05D004337 ORTHO05D005422 1.1e-278 963.0 577 81.3
Gorai.008G001400 Gossypium raimondii HOM05D004337 ORTHO05D005422 4.1e-278 961.1 574 80.8
Hma1.2p1_0296F.1_g116900 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 5.3e-278 960.7 570 82.6
CANSAT54G2432 Cannabis sativa HOM05D004337 ORTHO05D005422 1.5e-277 959.1 579 80.1
Actinidia19947 Actinidia chinensis HOM05D004337 ORTHO05D005422 5.9e-277 957.2 570 81.2
Sed0025757 Sechium edule HOM05D004337 ORTHO05D005422 1.3e-276 956.1 571 80.4
TWI75G1462 Tripterygium wilfordii HOM05D004337 ORTHO05D005422 1.9e-275 952.2 570 80.2
PGR119G0424 Punica granatum HOM05D004337 ORTHO05D005422 7.2e-275 950.3 575 80.9
Migut.H02542 Erythranthe guttata HOM05D004337 ORTHO05D005422 2.7e-274 948.3 576 79.0
Oeu054207.1 Olea europaea HOM05D004337 ORTHO05D005422 4.6e-274 947.6 588 78.2
Hund21761 Selenicereus undatus HOM05D004337 ORTHO05D005422 6.7e-273 943.7 573 79.1
MSTRG.23236 Avicennia marina HOM05D004337 ORTHO05D005422 1.5e-272 942.6 574 78.6
Oeu046358.1 Olea europaea HOM05D004337 ORTHO05D005422 1.5e-272 942.6 574 79.4
Sc16g0009860 Simmondsia chinensis HOM05D004337 ORTHO05D005422 3.3e-272 941.4 552 81.9
THA.LOC104819366 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 9.7e-272 939.9 574 79.1
arahy.Tifrunner.gnm1.ann1.X1BSDH Arachis hypogaea HOM05D004337 ORTHO05D005422 1.7e-271 939.1 548 81.8
EL10Ac4g09743 Beta vulgaris HOM05D004337 ORTHO05D005422 1.8e-270 935.6 552 80.1
Thhalv10013045m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 1.8e-270 935.6 579 77.9
RcHm_v2.0_Chr3g0484771 Rosa chinensis HOM05D004337 ORTHO05D005422 1.8e-270 935.6 554 80.7
FAN28G1720 Fragaria x ananassa HOM05D004337 ORTHO05D005422 2.4e-270 935.3 595 76.3
PSO761G0180 Papaver somniferum HOM05D004337 ORTHO05D005422 2.4e-270 935.3 578 77.9
FvH4_1g25770 Fragaria vesca HOM05D004337 ORTHO05D005422 4.1e-270 934.5 581 77.8
PSO210G2848 Papaver somniferum HOM05D004337 ORTHO05D005422 4.1e-270 934.5 583 77.0
FAN23G1824 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.2e-269 932.9 595 76.3
THA.LOC104818397 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 2.0e-269 932.2 570 78.8
Peaxi162Scf00353g00735 Petunia axillaris HOM05D004337 ORTHO05D005422 2.6e-269 931.8 581 77.6
FAN26G1467 Fragaria x ananassa HOM05D004337 ORTHO05D005422 3.4e-269 931.4 595 76.1
VMungo1309G0234 Vigna mungo HOM05D004337 ORTHO05D005422 5.9e-269 930.6 577 78.3
ATR1089G072 Amborella trichopoda HOM05D004337 ORTHO05D005422 7.7e-269 930.2 576 78.0
Eucgr.I00018 Eucalyptus grandis HOM05D004337 ORTHO05D005422 7.7e-269 930.2 573 77.8
Glyma.04G203800 Glycine max HOM05D004337 ORTHO05D005422 2.2e-268 928.7 576 78.5
CARHR204490 Cardamine hirsuta HOM05D004337 ORTHO05D005422 2.9e-268 928.3 580 77.9
Lsat_1_v5_gn_2_40441 Lactuca sativa HOM05D004337 ORTHO05D005422 2.9e-268 928.3 575 78.6
Nitab4.5_0000496g0240 Nicotiana tabacum HOM05D004337 ORTHO05D005422 2.9e-268 928.3 556 80.2
FAN19G0301 Fragaria x ananassa HOM05D004337 ORTHO05D005422 8.5e-268 926.8 595 76.0
AL6G19170 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.9e-267 925.6 579 77.5
AUR62000615 Chenopodium quinoa HOM05D004337 ORTHO05D005422 1.9e-267 925.6 596 75.3
AUR62006971 Chenopodium quinoa HOM05D004337 ORTHO05D005422 2.5e-267 925.2 596 75.7
unitig_736.g22365 Utricularia gibba HOM05D004337 ORTHO05D005422 2.5e-267 925.2 581 77.1
TPR.G7800 Trifolium pratense HOM05D004337 ORTHO05D005422 7.2e-267 923.7 576 78.0
CAN.G1156.26 Capsicum annuum HOM05D004337 ORTHO05D005422 2.1e-266 922.2 571 76.9
C09p68510 Brassica napus HOM05D004337 ORTHO05D005422 3.6e-266 921.4 585 76.4
Solyc05g056350.3 Solanum lycopersicum HOM05D004337 ORTHO05D005422 7.9e-266 920.2 580 75.9
Sopen05g034740 Solanum pennellii HOM05D004337 ORTHO05D005422 7.9e-266 920.2 580 75.7
PGSC0003DMG400023451 Solanum tuberosum HOM05D004337 ORTHO05D005422 7.9e-266 920.2 584 75.7
BraA10t44874Z Brassica rapa HOM05D004337 ORTHO05D005422 1.8e-265 919.1 580 76.6
BolC9t59595H Brassica oleracea HOM05D004337 ORTHO05D005422 2.3e-265 918.7 586 76.3
Carub.0006s0742 Capsella rubella HOM05D004337 ORTHO05D005422 2.3e-265 918.7 579 77.4
Lj1g0000957 Lotus japonicus HOM05D004337 ORTHO05D005422 2.3e-265 918.7 565 78.6
Lalb_Chr12g0202711 Lupinus albus HOM05D004337 ORTHO05D005422 2.3e-265 918.7 582 78.2
Lalb_Chr07g0183961 Lupinus albus HOM05D004337 ORTHO05D005422 3.0e-265 918.3 580 77.6
SGA_v2.0_scaffold12G06278 Striga asiatica HOM05D004337 ORTHO05D005422 3.0e-265 918.3 593 75.4
Oeu017633.3 Olea europaea HOM05D004337 ORTHO05D005422 3.9e-265 917.9 571 77.8
Lj4A821G42 Lonicera japonica HOM05D004337 ORTHO05D005422 8.8e-265 916.8 580 79.8
HPP92_009218 Vanilla planifolia HOM05D004337 ORTHO05D005422 8.8e-265 916.8 579 76.7
Psat5g057120 Pisum sativum HOM05D004337 ORTHO05D005422 2.0e-264 915.6 574 77.9
Aa31LG11G2980 Aethionema arabicum HOM05D004337 ORTHO05D005422 2.6e-264 915.2 574 76.5
Glyma.06G161400 Glycine max HOM05D004337 ORTHO05D005422 4.4e-264 914.4 563 78.9
COL.COLO4_33529 Corchorus olitorius HOM05D004337 ORTHO05D005422 5.7e-264 914.1 571 77.8
Medtr3g098210 Medicago truncatula HOM05D004337 ORTHO05D005422 9.7e-264 913.3 599 74.3
Phvul.009G159800 Phaseolus vulgaris HOM05D004337 ORTHO05D005422 1.3e-263 912.9 583 76.5
ECA238G0122 Erigeron canadensis HOM05D004337 ORTHO05D005422 2.2e-263 912.1 577 76.8
Nitab4.5_0004764g0030 Nicotiana tabacum HOM05D004337 ORTHO05D005422 6.3e-263 910.6 561 79.1
A10p28250 Brassica napus HOM05D004337 ORTHO05D005422 1.1e-262 909.8 575 76.3
AL6G34865 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 4.1e-262 907.9 600 73.7
BcaB08g37252 Brassica carinata HOM05D004337 ORTHO05D005422 7.0e-262 907.1 578 76.5
CARHR189960 Cardamine hirsuta HOM05D004337 ORTHO05D005422 7.0e-262 907.1 577 76.1
Thhalv10003872m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 1.2e-261 906.4 579 75.1
Rhsim10G0124700 Rhododendron simsii HOM05D004337 ORTHO05D005422 1.2e-261 906.4 700 66.4
Carub.0006s2135 Capsella rubella HOM05D004337 ORTHO05D005422 7.7e-261 903.7 574 76.0
Os04g0441900 Oryza sativa ssp. japonica HOM05D004337 ORTHO05D005422 2.2e-260 902.1 586 73.9
Zm00001eb082160 Zea mays HOM05D004337 ORTHO05D005422 2.9e-260 901.7 585 74.5
AT5G23575 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 3.8e-260 901.4 600 73.3
BraA09t36334Z Brassica rapa HOM05D004337 ORTHO05D005422 6.5e-260 900.6 579 75.0
Zm00001eb422980 Zea mays HOM05D004337 ORTHO05D005422 2.5e-259 898.7 583 73.8
BcaB04g19858 Brassica carinata HOM05D004337 ORTHO05D005422 4.2e-259 897.9 577 74.7
arahy.Tifrunner.gnm1.ann1.397MFZ Arachis hypogaea HOM05D004337 ORTHO05D005422 3.6e-258 894.8 593 74.7
Aa31LG3G18040 Aethionema arabicum HOM05D004337 ORTHO05D005422 4.7e-258 894.4 579 76.0
A09p06870 Brassica napus HOM05D004337 ORTHO05D005422 4.7e-258 894.4 579 74.3
C09p07600 Brassica napus HOM05D004337 ORTHO05D005422 6.1e-258 894.0 574 74.7
SGA_v2.0_scaffold51G18842 Striga asiatica HOM05D004337 ORTHO05D005422 1.0e-257 893.3 570 76.5
Nn5g27210 Nelumbo nucifera HOM05D004337 ORTHO05D005422 1.4e-257 892.9 525 83.0
Sp2g23620 Schrenkiella parvula HOM05D004337 ORTHO05D005422 1.4e-257 892.9 575 74.3
BolC9t53677H Brassica oleracea HOM05D004337 ORTHO05D005422 3.0e-257 891.7 574 74.4
BcaC04g23504 Brassica carinata HOM05D004337 ORTHO05D005422 3.9e-257 891.3 574 74.4
A06p34530 Brassica napus HOM05D004337 ORTHO05D005422 1.1e-256 889.8 575 74.8
C07p43970 Brassica napus HOM05D004337 ORTHO05D005422 4.4e-256 887.9 574 74.0
BraA06t26382Z Brassica rapa HOM05D004337 ORTHO05D005422 4.4e-256 887.9 575 74.6
HanXRQChr10g0285831 Helianthus annuus HOM05D004337 ORTHO05D005422 7.4e-256 887.1 535 78.9
BolC7t44925H Brassica oleracea HOM05D004337 ORTHO05D005422 2.8e-255 885.2 574 74.0
Dinv10851 Davidia involucrata HOM05D004337 ORTHO05D005422 5.9e-253 877.5 530 82.1
DCAR_009619 Daucus carota HOM05D004337 ORTHO05D005422 1.3e-252 876.3 608 72.9
Ca_17042_v3 Cicer arietinum L. HOM05D004337 ORTHO05D005422 3.8e-252 874.8 574 74.6
Sp6g34400 Schrenkiella parvula HOM05D004337 ORTHO05D005422 6.3e-247 857.4 582 72.9
AT5G08500 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 2.7e-245 852.0 524 78.4
Peaxi162Scf00651g00114 Petunia axillaris HOM05D004337 ORTHO05D005422 8.3e-239 830.5 580 71.7
CSS0021638 Camellia sinensis var. sinensis HOM05D004337 ORTHO05D005422 4.1e-238 828.2 499 80.8
vmacro12739 Vaccinium macrocarpon HOM05D004337 ORTHO05D005422 6.6e-236 820.8 932 50.9
Mapoly0020s0073 Marchantia polymorpha HOM05D004337 ORTHO05D005422 2.3e-233 812.4 575 68.3
SMO116G0204 Selaginella moellendorffii HOM05D004337 ORTHO05D005422 2.3e-233 812.4 551 70.4
AL6G18970 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 5.2e-233 811.2 873 51.8
Gohir.D12G002000 Gossypium hirsutum HOM05D004337 ORTHO05D005422 2.1e-213 746.1 570 66.0
Duzib264G1201 Durio zibethinus HOM05D004337 ORTHO05D005422 6.0e-213 744.6 572 66.3
Pp3c5_10010 Physcomitrium patens HOM05D004337 ORTHO05D005422 8.1e-210 734.2 586 62.3
Ah.06g188230 Amaranthus hybridus HOM05D004337 ORTHO05D005422 1.8e-209 733.0 517 71.8
Cc00_g00820 Coffea canephora HOM05D004337 ORTHO05D005422 2.7e-205 719.2 413 84.5
CBR_g44530 Chara braunii HOM05D004337 ORTHO05D005422 4.3e-195 685.3 562 56.8
CDE05G2996 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 3.1e-193 679.1 436 74.1
Haze_19353 Corylus avellana HOM05D004337 ORTHO05D005422 5.6e-179 631.7 342 90.4
AL6G18990 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 6.9e-169 598.2 437 69.8
SHI38349 Sapria himalayana HOM05D004337 ORTHO05D005422 1.9e-158 563.5 422 69.4
Cre09.g397900 Chlamydomonas reinhardtii HOM05D004337 ORTHO05D005422 2.6e-147 526.6 568 47.9
ClCG04G002690 Citrullus lanatus HOM05D004337 ORTHO05D005422 3.1e-145 519.6 309 84.1
AL6G19200 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 5.9e-136 488.8 448 61.2
MCO10G243 Micromonas commoda HOM05D004337 ORTHO05D005422 2.9e-114 416.8 346 58.1
Haze_27034 Corylus avellana HOM05D004337 ORTHO05D005422 7.5e-99 365.5 401 46.1
Cfa024513 Carpinus fangiana HOM05D004337 ORTHO05D005422 6.4e-98 362.5 525 38.5
PRCOL_00006172 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 1.2e-96 358.2 474 41.4
Cpa.g.sc138.38 Carica papaya HOM05D004337 ORTHO05D005422 1.1e-92 345.1 216 74.5
Cpa.g.sc3593.1 Carica papaya HOM05D004337 ORTHO05D005422 6.4e-90 335.9 188 89.4
Haze_19352 Corylus avellana HOM05D004337 ORTHO05D005422 8.9e-84 315.5 229 68.6
AL6G19020 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 3.6e-77 293.5 216 68.1
MCO07G426 Micromonas commoda HOM05D004337 ORTHO05D005422 3.1e-76 290.4 408 40.0
SalBow8G1257 Salvia bowleyana HOM05D004337 ORTHO05D005422 8.4e-74 282.3 215 65.1
SalBow8G3722 Salvia bowleyana HOM05D004337 ORTHO05D005422 8.4e-74 282.3 215 65.1
PRCOL_00005640 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 1.8e-68 264.6 381 36.7
ClCG04G002680 Citrullus lanatus HOM05D004337 ORTHO05D005422 7.6e-67 259.2 169 71.0
Cc00_g00810 Coffea canephora HOM05D004337 ORTHO05D005422 6.2e-61 239.6 172 67.4
HPP92_009290 Vanilla planifolia HOM05D004337 ORTHO05D005422 1.3e-50 205.3 228 51.8
CDE05G3583 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 7.7e-43 179.5 111 79.3
Hma1.2p1_0641F.1_g194250 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 1.1e-30 139.0 72 91.7
BcaC04g21668 Brassica carinata HOM05D004337 ORTHO05D021976 9.7e-30 136.0 141 51.8
Psat3g077400 Pisum sativum HOM05D004337 ORTHO05D005422 9.7e-30 136.0 120 57.5
C09p29160 Brassica napus HOM05D004337 ORTHO05D021976 2.8e-29 134.4 137 52.6
Hma1.2p1_0641F.1_g194230 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 1.6e-16 92.0 106 51.9
SEGI_12766 Sequoiadendron giganteum HOM05D004337 ORTHO05D005422 1.2e-14 85.9 44 81.8
AUR62044487 Chenopodium quinoa HOM05D004337 ORTHO05D021976 4.4e-14 84.0 49 73.5
AUR62044516 Chenopodium quinoa HOM05D004337 ORTHO05D021976 4.4e-14 84.0 49 73.5
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 3.1e-12 77.8 43 79.1
SHI11402 Sapria himalayana HOM05D000039 ORTHO05D006865 2.9e-10 71.2 48 62.5
CDE05G0837 Ceratophyllum demersum HOM05D004337 ORTHO05D043897 1.1e-09 69.3 53 60.4
Pp3c6_20370 Physcomitrium patens HOM05D004337 ORTHO05D043897 2.6e-06 58.2 51 49.0


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