Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.1373 Acer truncatum HOM05D006096 ORTHO05D007775 1.1e-223 779.6 402 100.0
TWI53G1189 Tripterygium wilfordii HOM05D006096 ORTHO05D007775 1.5e-143 513.5 411 65.5
Duzib187G1253 Durio zibethinus HOM05D006096 ORTHO05D007775 3.4e-143 512.3 405 66.2
Gohir.A10G085100 Gossypium hirsutum HOM05D006096 ORTHO05D007775 9.8e-143 510.8 407 64.9
CSS0046442 Camellia sinensis var. sinensis HOM05D006096 ORTHO05D007775 2.0e-140 503.1 408 65.7
Gorai.011G113400 Gossypium raimondii HOM05D006096 ORTHO05D007775 2.0e-140 503.1 407 64.6
Cpa.g.sc55.89 Carica papaya HOM05D006096 ORTHO05D007775 4.6e-140 501.9 400 65.0
Potri.005G073600 Populus trichocarpa HOM05D006096 ORTHO05D007775 1.6e-137 493.4 401 64.8
vmacro18587 Vaccinium macrocarpon HOM05D006096 ORTHO05D007775 1.6e-137 493.4 396 62.6
Prupe.6G191000 Prunus persica HOM05D006096 ORTHO05D007775 4.0e-136 488.8 404 62.1
RcHm_v2.0_Chr2g0112761 Rosa chinensis HOM05D006096 ORTHO05D007775 1.2e-135 487.3 406 60.1
FvH4_1g20510 Fragaria vesca HOM05D006096 ORTHO05D007775 1.7e-134 483.4 406 60.3
MD01G1033500 Malus domestica HOM05D006096 ORTHO05D007775 3.7e-134 482.3 401 62.3
Sc16g0000180 Simmondsia chinensis HOM05D006096 ORTHO05D007775 2.5e-130 469.5 397 61.5
MBI02_g02177_MAGBIO Magnolia biondii HOM05D006096 ORTHO05D007775 3.3e-130 469.2 409 60.6
Glyma.18G015800 Glycine max HOM05D006096 ORTHO05D007775 1.2e-129 467.2 407 59.5
CANSAT01G2346 Cannabis sativa HOM05D006096 ORTHO05D007775 4.7e-129 465.3 444 56.5
Eucgr.H04751 Eucalyptus grandis HOM05D006096 ORTHO05D007775 8.1e-129 464.5 403 59.8
Nn1g05418 Nelumbo nucifera HOM05D006096 ORTHO05D007775 3.1e-128 462.6 412 59.5
COL.COLO4_27275 Corchorus olitorius HOM05D006096 ORTHO05D007775 8.9e-128 461.1 413 62.2
Psat5g090600 Pisum sativum HOM05D006096 ORTHO05D007775 8.9e-128 461.1 403 59.6
PGSC0003DMG400016160 Solanum tuberosum HOM05D006096 ORTHO05D007775 2.2e-126 456.4 406 59.9
Glyma.11G241200 Glycine max HOM05D006096 ORTHO05D007775 3.7e-126 455.7 406 59.4
TAR625G1553 Trochodendron aralioides HOM05D006096 ORTHO05D007775 4.9e-126 455.3 354 65.3
Actinidia28854 Actinidia chinensis HOM05D006096 ORTHO05D007775 2.4e-125 453.0 403 60.3
Aqoxy6G00746 Aquilegia oxysepala HOM05D006096 ORTHO05D007775 9.2e-125 451.1 408 58.1
Phvul.001G253200 Phaseolus vulgaris HOM05D006096 ORTHO05D007775 2.1e-124 449.9 410 57.1
Lalb_Chr19g0127391 Lupinus albus HOM05D006096 ORTHO05D007775 2.7e-124 449.5 409 58.4
Medtr3g087010 Medicago truncatula HOM05D006096 ORTHO05D007775 3.5e-124 449.1 403 58.6
Cc07_g14840 Coffea canephora HOM05D006096 ORTHO05D007775 1.0e-123 447.6 409 60.1
Sopen11g004830 Solanum pennellii HOM05D006096 ORTHO05D007775 1.7e-123 446.8 401 59.9
TPR.G15994 Trifolium pratense HOM05D006096 ORTHO05D007775 2.3e-123 446.4 403 58.3
Lsat_1_v5_gn_5_34320 Lactuca sativa HOM05D006096 ORTHO05D007775 3.9e-123 445.7 402 58.0
Lj6g0005810 Lotus japonicus HOM05D006096 ORTHO05D007775 3.3e-122 442.6 416 57.7
AT5G10320 Arabidopsis thaliana HOM05D006096 ORTHO05D007775 7.3e-122 441.4 407 57.2
EL10Ac6g15136 Beta vulgaris HOM05D006096 ORTHO05D007775 1.2e-121 440.7 437 55.8
AL6G20820 Arabidopsis lyrata HOM05D006096 ORTHO05D007775 2.8e-121 439.5 409 55.7
VMungo1383G2853 Vigna mungo HOM05D006096 ORTHO05D007775 1.1e-120 437.6 406 55.9
Sed0027583 Sechium edule HOM05D006096 ORTHO05D007775 6.8e-120 434.9 404 58.7
Hund13600 Selenicereus undatus HOM05D006096 ORTHO05D007775 1.1e-117 427.6 484 50.8
arahy.Tifrunner.gnm1.ann1.DD3ZZY Arachis hypogaea HOM05D006096 ORTHO05D007775 1.4e-117 427.2 437 54.2
BolC9t59480H Brassica oleracea HOM05D006096 ORTHO05D007775 2.4e-117 426.4 405 54.6
arahy.Tifrunner.gnm1.ann1.C4UPUA Arachis hypogaea HOM05D006096 ORTHO05D007775 3.2e-117 426.0 410 56.6
CAN.G905.37 Capsicum annuum HOM05D006096 ORTHO05D007775 3.2e-117 426.0 369 62.3
C09p67070 Brassica napus HOM05D006096 ORTHO05D007775 4.1e-117 425.6 406 55.2
AUR62001986 Chenopodium quinoa HOM05D006096 ORTHO05D007775 5.4e-117 425.2 453 52.1
BcaC04g19312 Brassica carinata HOM05D006096 ORTHO05D007775 1.2e-116 424.1 404 54.7
A10p27260 Brassica napus HOM05D006096 ORTHO05D007775 2.1e-116 423.3 412 52.9
PSO210G0897 Papaver somniferum HOM05D006096 ORTHO05D007775 4.6e-116 422.2 399 56.1
FAN23G0863 Fragaria x ananassa HOM05D006096 ORTHO05D007775 1.0e-115 421.0 406 54.4
BraA10t44776Z Brassica rapa HOM05D006096 ORTHO05D007775 1.7e-115 420.2 409 53.5
Peaxi162Scf00381g01013 Petunia axillaris HOM05D006096 ORTHO05D007775 3.0e-115 419.5 405 56.8
BcaB08g37116 Brassica carinata HOM05D006096 ORTHO05D007775 1.5e-114 417.2 412 53.9
Oeu033049.1 Olea europaea HOM05D006096 ORTHO05D007775 3.3e-114 416.0 368 57.9
Migut.H02345 Erythranthe guttata HOM05D006096 ORTHO05D007775 4.7e-113 412.1 401 56.9
ATR0684G225 Amborella trichopoda HOM05D006096 ORTHO05D007775 8.1e-113 411.4 407 53.1
Aa31LG3G16830 Aethionema arabicum HOM05D006096 ORTHO05D007775 1.1e-112 411.0 417 55.2
Sabra05G0060100 Salix brachista HOM05D006096 ORTHO05D007775 1.7e-110 403.7 391 57.0
ECA246G2908 Erigeron canadensis HOM05D006096 ORTHO05D007775 3.8e-110 402.5 429 51.5
Rhsim08G0012600 Rhododendron simsii HOM05D006096 ORTHO05D007775 1.4e-109 400.6 404 54.5
Ciclev10026196m.g Citrus clementina HOM05D006096 ORTHO05D007775 3.5e-108 396.0 303 71.0
QL06p048476 Quercus lobata HOM05D006096 ORTHO05D007775 2.8e-105 386.3 312 64.4
ClCG07G017370 Citrullus lanatus HOM05D006096 ORTHO05D007775 4.8e-105 385.6 533 45.0
Haze_24882 Corylus avellana HOM05D006096 ORTHO05D007775 1.9e-101 373.6 467 49.0
Thhalv10013818m.g Eutrema salsugineum HOM05D006096 ORTHO05D007775 7.1e-101 371.7 409 50.4
Cfa002624 Carpinus fangiana HOM05D006096 ORTHO05D007775 8.7e-99 364.8 316 61.7
CiPaw.03G143900 Carya illinoinensis HOM05D006096 ORTHO05D007775 1.9e-98 363.6 330 60.0
Os04g0451100 Oryza sativa ssp. japonica HOM05D006096 ORTHO05D007775 2.5e-98 363.2 422 50.9
FAN19G2919 Fragaria x ananassa HOM05D006096 ORTHO05D007775 3.3e-98 362.8 406 49.8
PSO447G0355 Papaver somniferum HOM05D006096 ORTHO05D007775 1.6e-97 360.5 403 50.1
QL06p048506 Quercus lobata HOM05D006096 ORTHO05D007775 1.4e-96 357.5 330 59.4
Thecc.01G097900 Theobroma cacao HOM05D006096 ORTHO05D007775 2.4e-96 356.7 310 62.6
HPP92_011214 Vanilla planifolia HOM05D006096 ORTHO05D007775 3.1e-96 356.3 423 48.5
SGA_v2.0_scaffold111G31503 Striga asiatica HOM05D006096 ORTHO05D007775 4.0e-96 355.9 398 51.3
CARHR202970 Cardamine hirsuta HOM05D006096 ORTHO05D007775 5.8e-95 352.1 329 55.3
Manes.13G095500 Manihot esculenta HOM05D006096 ORTHO05D007775 7.6e-95 351.7 316 58.5
Dinv08841 Davidia involucrata HOM05D006096 ORTHO05D007775 1.3e-94 350.9 305 62.0
BcaC04g19315 Brassica carinata HOM05D006096 ORTHO05D007775 4.2e-93 345.9 290 60.3
Zm00001eb081250 Zea mays HOM05D006096 ORTHO05D007775 7.1e-93 345.1 286 61.5
Gohir.D10G103900 Gossypium hirsutum HOM05D006096 ORTHO05D007775 2.1e-92 343.6 307 61.2
CARHR202960 Cardamine hirsuta HOM05D006096 ORTHO05D007775 2.3e-91 340.1 286 59.4
SalBow3G4176 Salvia bowleyana HOM05D006096 ORTHO05D007775 1.3e-86 324.3 439 45.1
unitig_899.g14550 Utricularia gibba HOM05D006096 ORTHO05D007775 2.2e-86 323.6 435 45.3
CsaV3_4G004600 Cucumis sativus L. HOM05D006096 ORTHO05D007775 6.5e-86 322.0 295 60.0
DCAR_014211 Daucus carota HOM05D006096 ORTHO05D007775 3.5e-84 316.2 286 58.7
Nitab4.5_0004570g0020 Nicotiana tabacum HOM05D006096 ORTHO05D007775 6.0e-84 315.5 294 59.2
CsaV3_UNG122970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 1.6e-81 307.4 319 55.5
Haze_24873 Corylus avellana HOM05D006096 ORTHO05D007775 2.4e-80 303.5 440 45.7
Solyc11g009060.2 Solanum lycopersicum HOM05D006096 ORTHO05D007775 2.4e-80 303.5 303 56.1
FAN28G1526 Fragaria x ananassa HOM05D006096 ORTHO05D007775 4.1e-80 302.8 415 45.1
Pp3c26_3770 Physcomitrium patens HOM05D006096 ORTHO05D007775 3.8e-78 296.2 423 41.8
HanXRQChr02g0032011 Helianthus annuus HOM05D006096 ORTHO05D007775 5.5e-77 292.4 308 53.2
Sp6g33110 Schrenkiella parvula HOM05D006096 ORTHO05D007775 1.0e-75 288.1 311 51.1
AUR62003818 Chenopodium quinoa HOM05D006096 ORTHO05D007775 6.7e-75 285.4 278 55.0
MELO3C017606.2 Cucumis melo HOM05D006096 ORTHO05D007775 3.1e-72 276.6 576 35.2
Mapoly0077s0016 Marchantia polymorpha HOM05D006096 ORTHO05D007775 3.8e-70 269.6 464 37.5
Carub.0006s0879 Capsella rubella HOM05D006096 ORTHO05D007775 2.7e-68 263.5 298 51.3
Pp3c3_14090 Physcomitrium patens HOM05D006096 ORTHO05D007775 1.4e-67 261.2 272 50.4
CBR_g26374 Chara braunii HOM05D006096 ORTHO05D007775 4.2e-61 239.6 379 39.3
CsaV3_UNG160190 Cucumis sativus L. HOM05D006096 ORTHO05D007775 1.3e-57 228.0 152 74.3
Ca_16518_v3 Cicer arietinum L. HOM05D006096 ORTHO05D007775 1.7e-57 227.6 315 44.8
HanXRQChr15g0477621 Helianthus annuus HOM05D006096 ORTHO05D007775 1.1e-56 224.9 307 44.3
AagrBONN_evm.TU.Sc2ySwM_344.1220 Anthoceros agrestis HOM05D006096 ORTHO05D007775 2.5e-53 213.8 330 40.9
CARHR202980 Cardamine hirsuta HOM05D006096 ORTHO05D007775 3.2e-53 213.4 256 47.3
Nitab4.5_0000743g0130 Nicotiana tabacum HOM05D006096 ORTHO05D007775 3.2e-53 213.4 403 36.2
CBR_g53530 Chara braunii HOM05D006096 ORTHO05D007775 1.2e-52 211.5 265 41.9
SMO301G0024 Selaginella moellendorffii HOM05D006096 ORTHO05D007775 2.9e-46 190.3 184 52.7
MSTRG.23356 Avicennia marina HOM05D006096 ORTHO05D007775 5.0e-46 189.5 284 41.5
CDE06G0254 Ceratophyllum demersum HOM05D006096 ORTHO05D007775 2.4e-40 170.6 377 31.8
CsaV3_UNG223570 Cucumis sativus L. HOM05D006096 ORTHO05D007775 5.4e-40 169.5 237 42.2
QL06p048511 Quercus lobata HOM05D006096 ORTHO05D007775 9.5e-37 158.7 98 77.6
GSVIVG01006632001 Vitis vinifera HOM05D006096 ORTHO05D007775 1.2e-36 158.3 99 73.7
Cre17.g719050 Chlamydomonas reinhardtii HOM05D006096 ORTHO05D007775 4.5e-31 139.8 282 32.6
Gohir.D10G103800 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.1e-29 135.2 84 73.8
Carub.0006s0878 Capsella rubella HOM05D006096 ORTHO05D007775 1.6e-28 131.3 85 72.9
HanXRQChr02g0032001 Helianthus annuus HOM05D006096 ORTHO05D007775 3.6e-20 103.6 65 73.8
SEGI_01830 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 3.6e-20 103.6 127 45.7
Actinidia28243 Actinidia chinensis HOM05D006096 ORTHO05D009823 1.1e-19 102.1 217 35.5
BcaB02g08416 Brassica carinata HOM05D006096 ORTHO05D007775 2.3e-19 100.9 88 60.2
Ah.02g123840 Amaranthus hybridus HOM05D006096 ORTHO05D007775 2.0e-18 97.8 67 67.2
Cc03_g11790 Coffea canephora HOM05D006096 ORTHO05D007775 2.4e-16 90.9 88 52.3
Cc08_g12120 Coffea canephora HOM05D005131 ORTHO05D003188 1.6e-12 78.2 248 28.2
SEGI_02986 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 4.7e-12 76.6 61 55.7
CsaV3_UNG124970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 3.4e-10 70.5 71 50.7
CsaV3_UNG160180 Cucumis sativus L. HOM05D006096 ORTHO05D007775 3.4e-10 70.5 91 45.1
Nitab4.5_0004570g0030 Nicotiana tabacum HOM05D006096 ORTHO05D007775 4.9e-09 66.6 85 44.7


User provided reference genes

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