Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.1262 Acer truncatum HOM05D000652 ORTHO05D000486 6.1e-46 187.2 99 100.0
Atru.chr3.1271 Acer truncatum HOM05D000652 ORTHO05D000486 1.6e-38 162.5 98 87.8
Ciclev10027092m.g Citrus clementina HOM05D000652 ORTHO05D000486 1.1e-23 113.2 96 63.5
THA.LOC104824910 Tarenaya hassleriana HOM05D000652 ORTHO05D000486 1.0e-16 90.1 95 53.7
Haze_15058 Corylus avellana HOM05D000652 ORTHO05D000486 7.3e-15 84.0 91 51.6
Aa31LG6G15030 Aethionema arabicum HOM05D000652 ORTHO05D000486 1.6e-14 82.8 92 52.2
Ca_04532_v3 Cicer arietinum L. HOM05D000652 ORTHO05D000486 1.4e-13 79.7 90 51.1
Thhalv10027500m.g Eutrema salsugineum HOM05D000652 ORTHO05D000486 1.8e-13 79.3 92 51.1
AT4G38070 Arabidopsis thaliana HOM05D000652 ORTHO05D000486 3.1e-13 78.6 92 50.0
BraA08t34266Z Brassica rapa HOM05D003192 ORTHO05D003596 4.0e-13 78.2 94 51.1
AL7G12550 Arabidopsis lyrata HOM05D000652 ORTHO05D000486 5.2e-13 77.8 87 52.9
Psat2g081440 Pisum sativum HOM05D000652 ORTHO05D000486 5.2e-13 77.8 91 51.6
CiPaw.01G045900 Carya illinoinensis HOM05D000652 ORTHO05D000486 6.8e-13 77.4 88 54.5
Lalb_Chr16g0381691 Lupinus albus HOM05D000652 ORTHO05D000486 6.8e-13 77.4 90 51.1
BcaB03g12307 Brassica carinata HOM05D000652 ORTHO05D000486 8.9e-13 77.0 94 50.0
Prupe.6G198500 Prunus persica HOM05D000652 ORTHO05D000486 1.2e-12 76.6 76 55.3
BcaC01g00348 Brassica carinata HOM05D000652 ORTHO05D000486 2.0e-12 75.9 94 50.0
C03p78760 Brassica napus HOM05D003192 ORTHO05D003596 2.0e-12 75.9 94 50.0
VMungo1215G1897 Vigna mungo HOM05D000652 ORTHO05D000486 1.3e-11 73.2 93 49.5
Sp4g20590 Schrenkiella parvula HOM05D000652 ORTHO05D000486 2.2e-11 72.4 92 47.8
Glyma.02G041000 Glycine max HOM05D000652 ORTHO05D000486 6.4e-11 70.9 92 47.8
TPR.G29981 Trifolium pratense HOM05D000652 ORTHO05D000486 6.4e-11 70.9 86 50.0
Glyma.01G023833 Glycine max HOM05D000652 ORTHO05D000486 1.4e-10 69.7 93 46.2
Lalb_Chr05g0216441 Lupinus albus HOM05D000652 ORTHO05D000486 1.4e-10 69.7 78 53.8
Phvul.002G148000 Phaseolus vulgaris HOM05D000652 ORTHO05D000486 1.9e-10 69.3 88 45.5
FvH4_1g19780 Fragaria vesca HOM05D000652 ORTHO05D000486 3.2e-10 68.6 77 51.9
FAN19G0853 Fragaria x ananassa HOM05D000652 ORTHO05D000486 3.2e-10 68.6 77 51.9
Lj2g0012973 Lotus japonicus HOM05D000652 ORTHO05D000486 3.2e-10 68.6 81 50.6
TWI32G0715 Tripterygium wilfordii HOM05D000652 ORTHO05D000486 4.1e-10 68.2 89 44.9
FAN23G2935 Fragaria x ananassa HOM05D000652 ORTHO05D000486 7.1e-10 67.4 77 51.9
MD15G1314000 Malus domestica HOM05D000652 ORTHO05D000486 1.2e-09 66.6 69 52.2
Thhalv10017944m.g Eutrema salsugineum HOM05D000652 ORTHO05D000486 1.6e-09 66.2 89 48.3
Manes.12G127100 Manihot esculenta HOM05D000652 ORTHO05D000486 3.5e-09 65.1 61 50.8
Lalb_Chr02g0160101 Lupinus albus HOM05D000652 ORTHO05D000486 7.8e-09 63.9 55 61.8
RcHm_v2.0_Chr2g0111351 Rosa chinensis HOM05D000652 ORTHO05D000486 1.3e-08 63.2 77 51.9
Sabra07G0008000 Salix brachista HOM05D006593 ORTHO05D008512 3.0e-08 62.0 87 46.0
Potri.007G010500 Populus trichocarpa HOM05D000652 ORTHO05D000486 3.9e-08 61.6 96 42.7
Lj1g0021883 Lotus japonicus HOM05D000652 ORTHO05D000486 6.6e-08 60.8 91 48.4
Medtr5g032375 Medicago truncatula HOM05D000652 ORTHO05D000486 2.5e-07 58.9 77 48.1
Cpa.g.sc55.51 Carica papaya HOM05D000652 ORTHO05D000486 4.3e-07 58.2 46 65.2
Duzib147G1119 Durio zibethinus HOM05D000652 ORTHO05D000486 5.6e-07 57.8 91 44.0
Aqoxy5G01308 Aquilegia oxysepala HOM05D000652 ORTHO05D000486 1.6e-06 56.2 90 42.2
CANSAT01G0253 Cannabis sativa HOM05D000652 ORTHO05D000486 3.6e-06 55.1 51 52.9
CiPaw.02G020800 Carya illinoinensis HOM05D000652 ORTHO05D000486 4.7e-06 54.7 59 50.8
FAN26G1879 Fragaria x ananassa HOM05D000652 ORTHO05D001344 8.1e-06 53.9 45 57.8


User provided reference genes

Program Settings