Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.1214 Acer truncatum HOM05D000198 ORTHO05D052642 2.0e-115 419.9 347 100.0
Ciclev10024788m.g Citrus clementina HOM05D000198 ORTHO05D003232 1.0e-31 141.7 361 49.0
Potri.005G147700 Populus trichocarpa HOM05D000198 ORTHO05D003232 3.9e-23 113.2 256 39.1
Manes.13G101900 Manihot esculenta HOM05D000198 ORTHO05D003232 2.6e-19 100.5 250 40.4
Thecc.01G088000 Theobroma cacao HOM05D000198 ORTHO05D003232 5.9e-19 99.4 308 38.6
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 7.9e-16 89.0 212 42.5
Sed0017008 Sechium edule HOM05D000198 ORTHO05D003232 1.8e-15 87.8 257 32.3
Duzib264G0805 Durio zibethinus HOM05D000198 ORTHO05D003232 2.3e-15 87.4 225 39.1
Glyma.08G276400 Glycine max HOM05D000198 ORTHO05D003232 4.8e-13 79.7 219 28.3
FvH4_1g19320 Fragaria vesca HOM05D000198 ORTHO05D003232 9.1e-12 75.5 242 38.4
CANSAT01G0061 Cannabis sativa HOM05D000198 ORTHO05D003232 2.0e-11 74.3 240 40.0
TWI77G0248 Tripterygium wilfordii HOM05D000198 ORTHO05D003232 3.5e-11 73.6 220 35.0
ClCG01G018280 Citrullus lanatus HOM05D000198 ORTHO05D003232 4.5e-11 73.2 264 29.2
Duzib147G1123 Durio zibethinus HOM05D000198 ORTHO05D003232 2.1e-08 64.3 245 34.7
CsaV3_6G044860 Cucumis sativus L. HOM05D000198 ORTHO05D003232 4.7e-08 63.2 130 33.1
PGR031G0421 Punica granatum HOM05D000198 ORTHO05D003232 4.7e-08 63.2 147 35.4
MELO3C007705.2 Cucumis melo HOM05D000198 ORTHO05D003232 1.0e-07 62.0 133 32.3
Prupe.6G205000 Prunus persica HOM05D000198 ORTHO05D003232 3.0e-07 60.5 66 53.0
Gohir.D10G099600 Gossypium hirsutum HOM05D000198 ORTHO05D003232 4.0e-07 60.1 179 38.5
Cfa006862 Carpinus fangiana HOM05D000198 ORTHO05D003232 5.2e-07 59.7 244 41.0
CiPaw.08G142700 Carya illinoinensis HOM05D000198 ORTHO05D003232 8.8e-07 58.9 240 37.5
Gohir.A10G088300 Gossypium hirsutum HOM05D000198 ORTHO05D003232 1.1e-06 58.5 61 49.2
Gorai.011G109400 Gossypium raimondii HOM05D000198 ORTHO05D003232 1.1e-06 58.5 61 49.2
Haze_03902 Corylus avellana HOM05D000198 ORTHO05D003232 4.4e-06 56.6 244 36.1
Cpa.g.sc10.74 Carica papaya HOM05D000198 ORTHO05D003232 7.5e-06 55.8 237 30.4
Dinv27019 Davidia involucrata HOM05D000198 ORTHO05D179677 7.5e-06 55.8 47 59.6


User provided reference genes

Program Settings