Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.1129 Acer truncatum HOM05D000108 ORTHO05D009193 6.0e-73 277.3 132 100.0
Atru.chr3.1121 Acer truncatum HOM05D000108 ORTHO05D009193 6.9e-61 237.3 112 99.1
Ciclev10027176m.g Citrus clementina HOM05D000108 ORTHO05D009193 3.9e-32 141.7 110 63.6
Haze_03948 Corylus avellana HOM05D000108 ORTHO05D009193 4.3e-31 138.3 107 59.8
Cfa006811 Carpinus fangiana HOM05D000108 ORTHO05D009193 5.7e-31 137.9 107 58.9
Manes.13G105500 Manihot esculenta HOM05D000108 ORTHO05D009193 2.8e-30 135.6 113 61.9
Dinv26989 Davidia involucrata HOM05D000108 ORTHO05D009193 2.0e-28 129.4 108 59.3
CSS0021662 Camellia sinensis var. sinensis HOM05D000240 ORTHO05D009193 7.7e-28 127.5 105 58.1
QL06p037786 Quercus lobata HOM05D000108 ORTHO05D009193 2.2e-27 125.9 113 54.9
Hma1.2p1_0723F.1_g208800 Hydrangea macrophylla HOM05D000108 ORTHO05D009193 2.9e-27 125.6 108 61.1
TAR381G0662 Trochodendron aralioides HOM05D000108 ORTHO05D009193 6.5e-27 124.4 111 56.8
Actinidia36392 Actinidia chinensis HOM05D001267 ORTHO05D009193 2.7e-25 119.0 112 52.7
CANSAT01G1422 Cannabis sativa HOM05D000108 ORTHO05D009193 3.6e-25 118.6 105 55.2
Actinidia11938 Actinidia chinensis HOM05D000108 ORTHO05D009193 2.3e-24 115.9 112 51.8
MD15G1305400 Malus domestica HOM05D000108 ORTHO05D009193 3.7e-22 108.6 97 58.8
RcHm_v2.0_Chr2g0109641 Rosa chinensis HOM05D000108 ORTHO05D009193 3.7e-22 108.6 94 59.6
Rhsim10G0085500 Rhododendron simsii HOM05D000108 ORTHO05D009193 4.8e-22 108.2 108 48.1
Duzib147G1569 Durio zibethinus HOM05D000108 ORTHO05D009193 8.2e-22 107.5 109 52.3
Manes.12G119900 Manihot esculenta HOM05D000108 ORTHO05D009193 8.2e-22 107.5 106 52.8
MD16G1282300 Malus domestica HOM05D000108 ORTHO05D009193 1.4e-21 106.7 107 54.2
FvH4_1g18770 Fragaria vesca HOM05D000108 ORTHO05D009193 2.4e-21 105.9 89 58.4
FAN19G2730 Fragaria x ananassa HOM05D000108 ORTHO05D009193 2.4e-21 105.9 89 58.4
FAN23G2110 Fragaria x ananassa HOM05D001267 ORTHO05D009193 3.1e-21 105.5 89 58.4
Duzib187G1713 Durio zibethinus HOM05D000108 ORTHO05D009193 5.3e-21 104.8 113 52.2
Prupe.6G211700 Prunus persica HOM05D000108 ORTHO05D009193 5.3e-21 104.8 97 58.8
FAN28G2709 Fragaria x ananassa HOM05D000108 ORTHO05D009193 9.1e-21 104.0 87 58.6
FAN26G1911 Fragaria x ananassa HOM05D000108 ORTHO05D009193 2.0e-20 102.8 89 57.3
CiPaw.07G041200 Carya illinoinensis HOM05D000108 ORTHO05D009193 2.6e-20 102.4 101 53.5
Nn5g29136 Nelumbo nucifera HOM05D000108 ORTHO05D009193 5.9e-20 101.3 99 51.5
TWI53G1622 Tripterygium wilfordii HOM05D000108 ORTHO05D009193 1.3e-19 100.1 127 48.0
MD01G1046900 Malus domestica HOM05D000108 ORTHO05D009193 1.7e-19 99.8 99 53.5
THA.LOC104798446 Tarenaya hassleriana HOM05D000108 ORTHO05D009193 5.0e-19 98.2 86 52.3
Thecc.01G081700 Theobroma cacao HOM05D000108 ORTHO05D009193 2.1e-17 92.8 115 47.8
COL.COLO4_11662 Corchorus olitorius HOM05D000070 ORTHO05D009193 2.7e-17 92.4 101 48.5
vmacro05468 Vaccinium macrocarpon HOM05D000240 ORTHO05D009193 6.1e-17 91.3 111 49.5
Aa31LG4G18130 Aethionema arabicum HOM05D000108 ORTHO05D009193 1.0e-16 90.5 100 44.0
Thhalv10010126m.g Eutrema salsugineum HOM05D000108 ORTHO05D009193 1.4e-16 90.1 101 47.5
AL5G29500 Arabidopsis lyrata HOM05D000108 ORTHO05D009193 2.3e-16 89.4 101 47.5
AT3G49650 Arabidopsis thaliana HOM05D000108 ORTHO05D009193 3.0e-16 89.0 101 47.5
Gorai.007G229100 Gossypium raimondii HOM05D000108 ORTHO05D009193 3.0e-16 89.0 100 49.0
Aqoxy6G00610 Aquilegia oxysepala HOM05D000108 ORTHO05D009193 3.9e-16 88.6 98 50.0
Carub.0005s1600 Capsella rubella HOM05D000108 ORTHO05D009193 8.8e-16 87.4 101 47.5
Gohir.D11G213200 Gossypium hirsutum HOM05D000108 ORTHO05D009193 8.8e-16 87.4 100 49.0
CARHR158690 Cardamine hirsuta HOM05D000108 ORTHO05D009193 7.4e-15 84.3 101 46.5
Sp5g12430 Schrenkiella parvula HOM05D001267 ORTHO05D009193 2.8e-14 82.4 101 45.5
BcaB02g09599 Brassica carinata HOM05D000108 ORTHO05D009193 3.7e-14 82.0 100 46.0
Eucgr.H02401 Eucalyptus grandis HOM05D000108 ORTHO05D009193 6.3e-14 81.3 121 43.0
PSO675G7990 Papaver somniferum HOM05D000108 ORTHO05D009193 1.8e-13 79.7 71 63.4
PGR102G2530 Punica granatum HOM05D000108 ORTHO05D009193 4.1e-13 78.6 85 50.6
Lj2C427T2 Lonicera japonica HOM05D000108 ORTHO05D009193 1.2e-12 77.0 91 45.1
A06p28360 Brassica napus HOM05D000108 ORTHO05D009193 1.6e-12 76.6 98 43.9
BraA06t25778Z Brassica rapa HOM05D000108 ORTHO05D009193 1.6e-12 76.6 98 43.9
BcaC01g02425 Brassica carinata HOM05D000108 ORTHO05D009193 1.0e-11 73.9 98 43.9
C03p65430 Brassica napus HOM05D000108 ORTHO05D009193 1.0e-11 73.9 98 43.9
BolC3t18795H Brassica oleracea HOM05D000108 ORTHO05D009193 1.0e-11 73.9 98 43.9
Cc07_g07690 Coffea canephora HOM05D000108 ORTHO05D009193 5.0e-11 71.6 97 38.1
PSO541G5758 Papaver somniferum HOM05D000108 ORTHO05D009193 8.5e-11 70.9 83 55.4
ATR0767G184 Amborella trichopoda HOM05D000108 ORTHO05D009193 2.5e-10 69.3 90 46.7
DCAR_010765 Daucus carota HOM05D000108 ORTHO05D009193 3.6e-09 65.5 79 46.8
ECA232G0770 Erigeron canadensis HOM05D000108 ORTHO05D009193 8.0e-09 64.3 99 39.4
SalBow7G4148 Salvia bowleyana HOM05D000108 ORTHO05D009193 1.0e-08 63.9 127 33.1
HanXRQChr09g0263031 Helianthus annuus HOM05D000108 ORTHO05D009193 1.8e-08 63.2 67 52.2
Lsat_1_v5_gn_4_158941 Lactuca sativa HOM05D000108 ORTHO05D009193 8.8e-08 60.8 65 53.8
GSVIVG01003703001 Vitis vinifera HOM05D000108 ORTHO05D009193 1.7e-06 56.6 61 45.9
Oeu024999.2 Olea europaea HOM05D000108 ORTHO05D009193 8.2e-06 54.3 100 35.0


User provided reference genes

Program Settings