Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.109 Acer truncatum HOM05D000045 ORTHO05D000067 1.2e-55 219.5 110 100.0
Atru.chr3.19 Acer truncatum HOM05D000045 ORTHO05D000067 1.4e-19 99.8 192 38.0
Prupe.7G188000 Prunus persica HOM05D000045 ORTHO05D000067 1.4e-11 73.2 67 58.2
FvH4_1g09751 Fragaria vesca HOM05D000045 ORTHO05D000067 5.4e-11 71.2 50 66.0
Nn5g31065 Nelumbo nucifera HOM05D000045 ORTHO05D000067 1.2e-10 70.1 83 47.0
RcHm_v2.0_Chr2g0096701 Rosa chinensis HOM05D000045 ORTHO05D000067 2.1e-10 69.3 92 45.7
Nn5g31066 Nelumbo nucifera HOM05D000045 ORTHO05D000067 2.7e-10 68.9 50 62.0
Aqoxy1G02677 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.6e-10 68.2 85 43.5
QL06p053456 Quercus lobata HOM05D000045 ORTHO05D000067 6.0e-10 67.8 50 60.0
Sabra11G0130900 Salix brachista HOM05D000045 ORTHO05D000067 7.8e-10 67.4 47 63.8
FvH4_2g17132 Fragaria vesca HOM05D000045 ORTHO05D000067 1.0e-09 67.0 99 41.4
MD15G1227300 Malus domestica HOM05D000045 ORTHO05D000067 1.0e-09 67.0 47 66.0
Potri.011G145800 Populus trichocarpa HOM05D000045 ORTHO05D000067 1.0e-09 67.0 47 63.8
Prupe.8G182800 Prunus persica HOM05D000045 ORTHO05D000067 1.0e-09 67.0 77 46.8
Hma1.2p1_0085F.1_g044300 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 2.3e-09 65.9 47 66.0
QL11p056930 Quercus lobata HOM05D000045 ORTHO05D000067 3.0e-09 65.5 77 48.1
Sed0019347 Sechium edule HOM05D000045 ORTHO05D000067 3.0e-09 65.5 74 43.2
Atru.chr5.3588 Acer truncatum HOM05D000045 ORTHO05D000067 3.9e-09 65.1 77 45.5
Lj2g0014388 Lotus japonicus HOM05D000045 ORTHO05D000067 5.1e-09 64.7 67 49.3
Potri.009G170100 Populus trichocarpa HOM05D000045 ORTHO05D000067 5.1e-09 64.7 50 60.0
MD10G1144200 Malus domestica HOM05D000045 ORTHO05D000067 6.6e-09 64.3 77 46.8
RcHm_v2.0_Chr6g0281571 Rosa chinensis HOM05D000045 ORTHO05D000067 6.6e-09 64.3 77 46.8
CSS0018338 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 8.7e-09 63.9 73 47.9
MD05G1144700 Malus domestica HOM05D000045 ORTHO05D000067 8.7e-09 63.9 77 48.1
Manes.02G117425 Manihot esculenta HOM05D000045 ORTHO05D000067 8.7e-09 63.9 47 66.0
PSO017G4008 Papaver somniferum HOM05D000045 ORTHO05D000067 8.7e-09 63.9 67 50.7
PSO170G0991 Papaver somniferum HOM05D000045 ORTHO05D000067 8.7e-09 63.9 67 50.7
Phvul.002G119401 Phaseolus vulgaris HOM05D000045 ORTHO05D000067 8.7e-09 63.9 50 54.0
Phvul.008G293200 Phaseolus vulgaris HOM05D000045 ORTHO05D000067 8.7e-09 63.9 75 44.0
TWI75G0414 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 8.7e-09 63.9 68 48.5
Cpa.g.sc60.6 Carica papaya HOM05D000045 ORTHO05D000067 1.1e-08 63.5 97 43.3
Manes.15G114400 Manihot esculenta HOM05D000045 ORTHO05D000067 1.1e-08 63.5 77 46.8
PGR142G2456 Punica granatum HOM05D000045 ORTHO05D000067 1.1e-08 63.5 50 60.0
Rhsim10G0190800 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.1e-08 63.5 50 58.0
Potri.004G209100 Populus trichocarpa HOM05D000045 ORTHO05D000067 1.5e-08 63.2 77 48.1
CiPaw.09G108100 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.5e-08 62.4 77 46.8
Eucgr.I01547 Eucalyptus grandis HOM05D000045 ORTHO05D000067 2.5e-08 62.4 50 56.0
GSVIVG01023847001 Vitis vinifera HOM05D000045 ORTHO05D000067 2.5e-08 62.4 77 44.2
Migut.D02326 Erythranthe guttata HOM05D000045 ORTHO05D000067 3.3e-08 62.0 159 30.8
Rhsim11G0199200 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.3e-08 62.0 81 42.0
CSS0007508 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.3e-08 61.6 85 42.4
CSS0016715 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.3e-08 61.6 85 42.4
ClCG02G010760 Citrullus lanatus HOM05D000045 ORTHO05D000067 4.3e-08 61.6 74 43.2
CsaV3_6G009980 Cucumis sativus L. HOM05D000045 ORTHO05D000067 4.3e-08 61.6 73 45.2
Duzib132G1229 Durio zibethinus HOM05D000045 ORTHO05D000067 4.3e-08 61.6 89 41.6
COL.COLO4_08584 Corchorus olitorius HOM05D000045 ORTHO05D000067 5.6e-08 61.2 86 44.2
EL10Ac9g21566 Beta vulgaris HOM05D000045 ORTHO05D000067 9.6e-08 60.5 79 40.5
Ca_06509_v3 Cicer arietinum L. HOM05D000045 ORTHO05D000067 9.6e-08 60.5 83 39.8
Ca_29706_v3 Cicer arietinum L. HOM05D000045 ORTHO05D000067 9.6e-08 60.5 83 39.8
CsaV3_7G002210 Cucumis sativus L. HOM05D000045 ORTHO05D000067 9.6e-08 60.5 45 57.8
Duzib052G0228 Durio zibethinus HOM05D000045 ORTHO05D000067 9.6e-08 60.5 88 42.0
HanXRQChr14g0455151 Helianthus annuus HOM05D000045 ORTHO05D000067 1.3e-07 60.1 66 51.5
vmacro08132 Vaccinium macrocarpon HOM05D000045 ORTHO05D011917 1.3e-07 60.1 77 42.9
MELO3C013479.2 Cucumis melo HOM05D000045 ORTHO05D000067 1.6e-07 59.7 74 43.2
MELO3C015688.2 Cucumis melo HOM05D000045 ORTHO05D000067 1.6e-07 59.7 45 57.8
AUR62023887 Chenopodium quinoa HOM05D000045 ORTHO05D000067 2.1e-07 59.3 75 40.0
ClCG02G003190 Citrullus lanatus HOM05D000045 ORTHO05D000067 2.1e-07 59.3 46 54.3
Migut.O00582 Erythranthe guttata HOM05D000045 ORTHO05D000067 2.1e-07 59.3 48 60.4
Duzib248G0870 Durio zibethinus HOM05D000045 ORTHO05D000067 2.8e-07 58.9 45 60.0
Manes.15G114300 Manihot esculenta HOM05D000045 ORTHO05D000067 2.8e-07 58.9 50 52.0
Nn6g31599 Nelumbo nucifera HOM05D000045 ORTHO05D000067 2.8e-07 58.9 177 30.5
Peaxi162Scf00431g00213 Petunia axillaris HOM05D000045 ORTHO05D011917 2.8e-07 58.9 46 60.9
Sabra04G0141000 Salix brachista HOM05D000045 ORTHO05D000067 2.8e-07 58.9 77 45.5
Thecc.02G148900 Theobroma cacao HOM05D000045 ORTHO05D000067 2.8e-07 58.9 77 42.9
CANSAT25G1993 Cannabis sativa HOM05D000045 ORTHO05D000067 3.6e-07 58.5 209 28.7
Glyma.02G312300 Glycine max HOM05D000045 ORTHO05D000067 3.6e-07 58.5 75 42.7
Lj4g0005121 Lotus japonicus HOM05D000045 ORTHO05D000067 3.6e-07 58.5 50 52.0
Lalb_Chr09g0324891 Lupinus albus HOM05D000045 ORTHO05D000067 3.6e-07 58.5 180 27.8
Atru.chr5.3589 Acer truncatum HOM05D000045 ORTHO05D000067 4.8e-07 58.2 50 54.0
Gohir.A04G110700 Gossypium hirsutum HOM05D000045 ORTHO05D000067 4.8e-07 58.2 107 37.4
Sabra04G0140900 Salix brachista HOM05D000045 ORTHO05D000067 4.8e-07 58.2 47 57.4
Sed0005983 Sechium edule HOM05D000045 ORTHO05D000067 4.8e-07 58.2 46 56.5
CSS0018875 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.2e-07 57.8 81 38.3
Glyma.11G088700 Glycine max HOM05D000045 ORTHO05D000067 6.2e-07 57.8 74 39.2
Potri.004G209000 Populus trichocarpa HOM05D000045 ORTHO05D000067 6.2e-07 57.8 47 57.4
Eucgr.I01548 Eucalyptus grandis HOM05D000045 ORTHO05D000067 8.1e-07 57.4 35 74.3
TPR.G33413 Trifolium pratense HOM05D000045 ORTHO05D000067 1.1e-06 57.0 83 39.8
AUR62010213 Chenopodium quinoa HOM05D000045 ORTHO05D000067 1.4e-06 56.6 49 46.9
Ciclev10027888m.g Citrus clementina HOM05D000045 ORTHO05D000067 1.4e-06 56.6 88 34.1
Glyma.01G000400 Glycine max HOM05D000045 ORTHO05D000067 1.4e-06 56.6 45 57.8
QL11p056923 Quercus lobata HOM05D000045 ORTHO05D000067 1.4e-06 56.6 90 37.8
GSVIVG01013441001 Vitis vinifera HOM05D000045 ORTHO05D000067 1.4e-06 56.6 47 57.4
THA.LOC104824716 Tarenaya hassleriana HOM05D000045 ORTHO05D000067 2.4e-06 55.8 73 45.2
TAR376G0491 Trochodendron aralioides HOM05D000045 ORTHO05D000067 2.4e-06 55.8 47 53.2
CANSAT25G0796 Cannabis sativa HOM05D000045 ORTHO05D000067 3.1e-06 55.5 206 27.7
Duzib132G0605 Durio zibethinus HOM05D000045 ORTHO05D000067 3.1e-06 55.5 50 52.0
Gohir.D04G151000 Gossypium hirsutum HOM05D000045 ORTHO05D000067 3.1e-06 55.5 107 37.4
Hma1.2p1_0810F.1_g222000 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 3.1e-06 55.5 44 52.3
Lj9A409T91 Lonicera japonica HOM05D000045 ORTHO05D000067 3.1e-06 55.5 50 52.0
CSS0016804 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.0e-06 55.1 170 29.4
Hma1.2p1_0052F.1_g030480 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 4.0e-06 55.1 70 44.3
PSO675G7981 Papaver somniferum HOM05D000045 ORTHO05D000067 4.0e-06 55.1 47 55.3
PGR142G0332 Punica granatum HOM05D000045 ORTHO05D000067 4.0e-06 55.1 92 34.8
Sc18g0005780 Simmondsia chinensis HOM05D000045 ORTHO05D000067 4.0e-06 55.1 45 53.3
Nitab4.5_0001220g0110 Nicotiana tabacum HOM05D000045 ORTHO05D000067 5.3e-06 54.7 50 56.0
Dinv40225 Davidia involucrata HOM05D000534 ORTHO05D000389 6.9e-06 54.3 64 51.6
Nitab4.5_0009244g0010 Nicotiana tabacum HOM05D000045 ORTHO05D000067 6.9e-06 54.3 68 48.5
Thecc.02G148800 Theobroma cacao HOM05D000045 ORTHO05D000067 6.9e-06 54.3 50 50.0
TWI75G0844 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.9e-06 54.3 50 50.0
Cpa.g.sc60.5 Carica papaya HOM05D000045 ORTHO05D000067 9.0e-06 53.9 50 48.0
COL.COLO4_08583 Corchorus olitorius HOM05D000045 ORTHO05D000067 9.0e-06 53.9 50 50.0
ECA233G4300 Erigeron canadensis HOM05D000045 ORTHO05D000067 9.0e-06 53.9 45 51.1
Glyma.01G000600 Glycine max HOM05D000045 ORTHO05D000067 9.0e-06 53.9 47 53.2


User provided reference genes

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