Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.1060 Acer truncatum HOM05D004917 ORTHO05D005954 3.6e-160 568.2 283 100.0
Ciclev10026314m.g Citrus clementina HOM05D004917 ORTHO05D005954 1.4e-111 406.8 264 78.0
Cpa.g.sc673.2 Carica papaya HOM05D004917 ORTHO05D005954 1.0e-106 390.6 267 74.2
Thecc.01G076300 Theobroma cacao HOM05D004917 ORTHO05D005954 1.1e-103 380.6 262 72.5
Potri.014G012100 Populus trichocarpa HOM05D004917 ORTHO05D005954 3.1e-103 379.0 266 72.2
QL06p038930 Quercus lobata HOM05D004917 ORTHO05D005954 6.5e-101 371.3 248 73.8
Sabra14G0006700 Salix brachista HOM05D004917 ORTHO05D005954 6.5e-101 371.3 255 71.4
COL.COLO4_11615 Corchorus olitorius HOM05D004917 ORTHO05D005954 4.2e-100 368.6 266 71.1
Prupe.6G216800 Prunus persica HOM05D004917 ORTHO05D005954 1.2e-99 367.1 269 71.7
RcHm_v2.0_Chr2g0108761 Rosa chinensis HOM05D004917 ORTHO05D005954 1.2e-99 367.1 267 71.2
Hma1.2p1_0424F.1_g150480 Hydrangea macrophylla HOM05D004917 ORTHO05D005954 1.6e-99 366.7 260 70.0
GSVIVG01004399001 Vitis vinifera HOM05D004917 ORTHO05D005954 2.1e-99 366.3 263 70.0
Ca_22095_v3 Cicer arietinum L. HOM05D004917 ORTHO05D005954 4.7e-99 365.2 237 73.4
FvH4_1g18250 Fragaria vesca HOM05D004917 ORTHO05D005954 4.7e-99 365.2 263 71.1
TAR628G1580 Trochodendron aralioides HOM05D004917 ORTHO05D005954 1.8e-98 363.2 267 68.9
Eucgr.H02332 Eucalyptus grandis HOM05D004917 ORTHO05D005954 4.0e-98 362.1 203 82.8
Gorai.008G085700 Gossypium raimondii HOM05D004917 ORTHO05D005954 8.8e-98 360.9 266 67.3
Lj4g0024725 Lotus japonicus HOM05D004917 ORTHO05D005954 1.5e-97 360.1 200 84.0
GSVIVG01007444001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.5e-97 360.1 263 68.4
Cfa004388 Carpinus fangiana HOM05D004917 ORTHO05D005954 5.7e-97 358.2 215 78.6
Psat4g080360 Pisum sativum HOM05D004917 ORTHO05D005954 5.7e-97 358.2 247 70.9
Manes.13G109000 Manihot esculenta HOM05D004917 ORTHO05D005954 1.7e-96 356.7 259 68.3
Glyma.17G158500 Glycine max HOM05D004917 ORTHO05D005954 2.2e-96 356.3 254 70.5
Duzib147G0189 Durio zibethinus HOM05D004917 ORTHO05D005954 2.8e-96 355.9 265 68.3
FAN26G0787 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.8e-96 355.9 273 68.5
CANSAT01G2436 Cannabis sativa HOM05D004917 ORTHO05D005954 6.3e-96 354.8 268 67.9
Cc07_g07360 Coffea canephora HOM05D004917 ORTHO05D005954 6.3e-96 354.8 241 72.6
FAN23G1748 Fragaria x ananassa HOM05D004917 ORTHO05D005954 6.3e-96 354.8 263 69.2
TWI74G1062 Tripterygium wilfordii HOM05D004917 ORTHO05D005954 6.3e-96 354.8 248 70.6
VMungo0251G1412 Vigna mungo HOM05D004917 ORTHO05D005954 6.3e-96 354.8 254 70.9
RcHm_v2.0_Chr2g0108751 Rosa chinensis HOM05D004917 ORTHO05D005954 8.3e-96 354.4 262 69.1
Thecc.01G076400 Theobroma cacao HOM05D004917 ORTHO05D005954 8.3e-96 354.4 267 67.4
Actinidia16409 Actinidia chinensis HOM05D004917 ORTHO05D005954 1.1e-95 354.0 239 72.0
Medtr4g097500 Medicago truncatula HOM05D004917 ORTHO05D005954 7.0e-95 351.3 254 69.7
Rhsim08G0090300 Rhododendron simsii HOM05D004917 ORTHO05D005954 7.0e-95 351.3 245 72.2
COL.COLO4_11616 Corchorus olitorius HOM05D004917 ORTHO05D005954 9.1e-95 350.9 267 67.0
PGSC0003DMG400003322 Solanum tuberosum HOM05D004917 ORTHO05D005954 1.2e-94 350.5 219 77.2
FvH4_1g18230 Fragaria vesca HOM05D004917 ORTHO05D005954 2.7e-94 349.4 263 68.4
FAN19G0182 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.7e-94 349.4 263 68.4
FAN19G2004 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.7e-94 349.4 254 71.3
Nn5g30667 Nelumbo nucifera HOM05D004917 ORTHO05D005954 5.9e-94 348.2 264 68.9
Sopen02g014680 Solanum pennellii HOM05D004917 ORTHO05D005954 5.9e-94 348.2 201 81.1
Gohir.D12G076900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 2.9e-93 345.9 230 70.4
Sc07g0000430 Simmondsia chinensis HOM05D004917 ORTHO05D005954 3.8e-93 345.5 237 70.0
vmacro18012 Vaccinium macrocarpon HOM05D004917 ORTHO05D005954 3.8e-93 345.5 241 70.1
Phvul.003G232900 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 5.0e-93 345.1 249 68.3
arahy.Tifrunner.gnm1.ann1.1K25L2 Arachis hypogaea HOM05D004917 ORTHO05D005954 6.5e-93 344.7 254 66.5
Gohir.A10G089200 Gossypium hirsutum HOM05D004917 ORTHO05D005954 1.1e-92 344.0 251 68.1
Glyma.17G158400 Glycine max HOM05D004917 ORTHO05D005954 1.5e-92 343.6 255 68.6
Gorai.011G108500 Gossypium raimondii HOM05D004917 ORTHO05D005954 1.5e-92 343.6 251 68.1
Aqoxy1G00260 Aquilegia oxysepala HOM05D004917 ORTHO05D005954 2.5e-92 342.8 264 66.7
CiPaw.01G001900 Carya illinoinensis HOM05D004917 ORTHO05D005954 2.5e-92 342.8 251 70.1
Eucgr.H02333 Eucalyptus grandis HOM05D004917 ORTHO05D005954 2.5e-92 342.8 264 66.7
Lsat_1_v5_gn_4_160020 Lactuca sativa HOM05D004917 ORTHO05D005954 2.5e-92 342.8 243 70.8
arahy.Tifrunner.gnm1.ann1.UB5R5Q Arachis hypogaea HOM05D004917 ORTHO05D005954 4.2e-92 342.0 255 68.2
ECA232G4556 Erigeron canadensis HOM05D004917 ORTHO05D005954 4.2e-92 342.0 241 71.0
Gohir.D10G098900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 4.2e-92 342.0 251 67.7
Sed0017274 Sechium edule HOM05D004917 ORTHO05D005954 4.2e-92 342.0 200 79.5
EL10Ac6g15593 Beta vulgaris HOM05D004917 ORTHO05D005954 4.7e-91 338.6 242 69.8
CAN.G775.1 Capsicum annuum HOM05D004917 ORTHO05D005954 1.0e-90 337.4 262 63.7
PSO017G2968 Papaver somniferum HOM05D004917 ORTHO05D005954 3.0e-90 335.9 192 81.2
MD02G1189600 Malus domestica HOM05D004917 ORTHO05D005954 4.0e-90 335.5 268 66.0
DCAR_014953 Daucus carota HOM05D004917 ORTHO05D005954 5.2e-90 335.1 197 80.2
Phvul.003G232800 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 2.0e-89 333.2 250 66.4
CsaV3_2G016370 Cucumis sativus L. HOM05D004917 ORTHO05D005954 7.5e-89 331.3 247 68.8
Os03g0729200 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 7.5e-89 331.3 201 76.1
FvH4_1g18251 Fragaria vesca HOM05D004917 ORTHO05D005954 9.8e-89 330.9 198 79.3
PGR102G2131 Punica granatum HOM05D004917 ORTHO05D005954 9.8e-89 330.9 263 62.0
VMungo0251G2665 Vigna mungo HOM05D004917 ORTHO05D005954 1.3e-88 330.5 254 65.4
Lalb_Chr11g0075991 Lupinus albus HOM05D004917 ORTHO05D005954 4.9e-88 328.6 193 80.8
HanXRQChr09g0262071 Helianthus annuus HOM05D004917 ORTHO05D005954 1.1e-87 327.4 237 69.6
Zm00001eb215580 Zea mays HOM05D004917 ORTHO05D005954 1.4e-87 327.0 248 67.3
PSO170G3850 Papaver somniferum HOM05D004917 ORTHO05D005954 2.4e-87 326.2 192 80.2
SalBow5G1886 Salvia bowleyana HOM05D004917 ORTHO05D005954 3.1e-87 325.9 242 67.4
Ah.03g140710 Amaranthus hybridus HOM05D004917 ORTHO05D005954 1.2e-86 323.9 250 66.8
Migut.L00432 Erythranthe guttata HOM05D004917 ORTHO05D005954 5.9e-86 321.6 198 76.8
Sp2g28930 Schrenkiella parvula HOM05D004917 ORTHO05D005954 3.8e-85 318.9 197 73.6
AL8G43550 Arabidopsis lyrata HOM05D004917 ORTHO05D005954 5.0e-85 318.5 258 62.4
AT5G65840 Arabidopsis thaliana HOM05D004917 ORTHO05D005954 5.0e-85 318.5 258 61.2
Thhalv10004770m.g Eutrema salsugineum HOM05D004917 ORTHO05D005954 5.0e-85 318.5 197 73.6
Carub.0008s2673 Capsella rubella HOM05D004917 ORTHO05D005954 8.6e-85 317.8 222 68.5
PSO170G3322 Papaver somniferum HOM05D004917 ORTHO05D005954 1.1e-84 317.4 200 75.0
AUR62007540 Chenopodium quinoa HOM05D004917 ORTHO05D005954 2.5e-84 316.2 192 77.1
THA.LOC104827747 Tarenaya hassleriana HOM05D004917 ORTHO05D005954 4.3e-84 315.5 268 60.8
FAN28G2407 Fragaria x ananassa HOM05D004917 ORTHO05D005954 7.3e-84 314.7 189 80.4
PSO017G2694 Papaver somniferum HOM05D004917 ORTHO05D005954 1.2e-83 313.9 199 74.9
CARHR279840 Cardamine hirsuta HOM05D004917 ORTHO05D005954 4.7e-83 312.0 234 65.4
C09p10750 Brassica napus HOM05D004917 ORTHO05D005954 8.0e-83 311.2 251 62.9
BcaB04g20033 Brassica carinata HOM05D004917 ORTHO05D005954 1.0e-82 310.8 237 64.1
BcaB04g20036 Brassica carinata HOM05D004917 ORTHO05D005954 1.0e-82 310.8 237 64.1
AUR62004032 Chenopodium quinoa HOM05D004917 ORTHO05D005954 1.0e-82 310.8 192 76.0
BraA09t36573Z Brassica rapa HOM05D004917 ORTHO05D005954 1.4e-82 310.5 262 61.5
A09p09210 Brassica napus HOM05D004917 ORTHO05D005954 1.8e-82 310.1 256 60.9
Haze_15025 Corylus avellana HOM05D004917 ORTHO05D005954 3.0e-82 309.3 268 59.7
GSVIVG01007168001 Vitis vinifera HOM05D004917 ORTHO05D005954 4.0e-82 308.9 160 88.8
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 6.8e-82 308.1 252 62.7
Lj4A165T49 Lonicera japonica HOM05D004917 ORTHO05D005954 6.8e-82 308.1 258 63.6
SGA_v2.0_scaffold79G25603 Striga asiatica HOM05D004917 ORTHO05D005954 4.4e-81 305.4 235 67.2
ClCG02G012210 Citrullus lanatus HOM05D004917 ORTHO05D005954 5.8e-81 305.1 234 67.9
RcHm_v2.0_Chr2g0108771 Rosa chinensis HOM05D004917 ORTHO05D005954 9.8e-81 304.3 202 74.3
BcaC04g23243 Brassica carinata HOM05D004917 ORTHO05D005954 1.7e-80 303.5 250 60.8
BolC9t53970H Brassica oleracea HOM05D004917 ORTHO05D005954 2.9e-80 302.8 250 60.8
SEGI_14750 Sequoiadendron giganteum HOM05D004917 ORTHO05D005954 3.7e-80 302.4 220 65.0
DCAR_000455 Daucus carota HOM05D004917 ORTHO05D005954 6.4e-80 301.6 167 81.4
FAN26G1896 Fragaria x ananassa HOM05D004917 ORTHO05D005954 8.3e-80 301.2 266 62.0
Oeu013341.1 Olea europaea HOM05D004917 ORTHO05D005954 1.1e-79 300.8 157 87.3
PSO017G4293 Papaver somniferum HOM05D004917 ORTHO05D005954 1.1e-79 300.8 192 74.0
MELO3C020846.2 Cucumis melo HOM05D004917 ORTHO05D005954 2.4e-79 299.7 246 63.8
PSO170G4503 Papaver somniferum HOM05D004917 ORTHO05D005954 5.4e-79 298.5 192 74.0
ATR0739G130 Amborella trichopoda HOM05D004917 ORTHO05D005954 1.2e-78 297.4 200 70.0
Nitab4.5_0000036g0150 Nicotiana tabacum HOM05D004917 ORTHO05D005954 6.0e-78 295.0 161 83.2
CSS0005558 Camellia sinensis var. sinensis HOM05D004917 ORTHO05D005954 1.3e-77 293.9 244 62.3
Peaxi162Scf00449g00417 Petunia axillaris HOM05D004917 ORTHO05D005954 1.4e-74 283.9 270 57.8
Migut.L00430 Erythranthe guttata HOM05D004917 ORTHO05D005954 5.2e-74 282.0 182 74.2
Dinv26959 Davidia involucrata HOM05D004917 ORTHO05D005954 2.9e-72 276.2 158 82.3
CDE02G4371 Ceratophyllum demersum HOM05D004917 ORTHO05D005954 3.7e-72 275.8 243 58.0
Os03g0729300 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 5.0e-69 265.4 187 65.8
Nitab4.5_0007379g0030 Nicotiana tabacum HOM05D004917 ORTHO05D005954 1.2e-67 260.8 264 54.9
Pp3c27_7100 Physcomitrium patens HOM05D004917 ORTHO05D005954 1.5e-60 237.3 231 48.1
Hund16417 Selenicereus undatus HOM05D004917 ORTHO05D005954 7.3e-60 235.0 146 77.4
MBI16_g06077_MAGBIO Magnolia biondii HOM05D004917 ORTHO05D005954 2.1e-59 233.4 243 52.7
unitig_37.g11996 Utricularia gibba HOM05D004917 ORTHO05D005954 1.5e-52 210.7 148 68.9
Zm00001eb056030 Zea mays HOM05D004917 ORTHO05D005954 7.3e-52 208.4 132 69.7
AagrBONN_evm.TU.Sc2ySwM_368.1530 Anthoceros agrestis HOM05D004917 ORTHO05D005954 3.1e-50 203.0 236 44.1
FAN23G2689 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.2e-49 201.1 152 69.7
GSVIVG01004400001 Vitis vinifera HOM05D004917 ORTHO05D005954 3.8e-48 196.1 103 85.4
QL06p038908 Quercus lobata HOM05D004917 ORTHO05D005954 2.4e-47 193.4 102 85.3
GSVIVG01007167001 Vitis vinifera HOM05D004917 ORTHO05D005954 7.1e-39 165.2 163 55.8
ATR0739G160 Amborella trichopoda HOM05D004917 ORTHO05D005954 6.0e-38 162.2 108 66.7
QL02p069743 Quercus lobata HOM05D004917 ORTHO05D005954 3.1e-34 149.8 96 71.9
QL06p038910 Quercus lobata HOM05D004917 ORTHO05D005954 5.3e-34 149.1 93 73.1
FAN28G0406 Fragaria x ananassa HOM05D004917 ORTHO05D005954 8.4e-32 141.7 100 69.0
FAN26G2723 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.4e-31 140.2 193 42.5
MCO14G127 Micromonas commoda HOM05D004917 ORTHO05D005954 1.3e-24 117.9 159 40.3
Potri.007G007201 Populus trichocarpa HOM05D004917 ORTHO05D005954 3.5e-22 109.8 69 78.3
Sabra07G0005500 Salix brachista HOM05D004917 ORTHO05D005954 6.0e-22 109.0 151 45.7
SMO353G0397 Selaginella moellendorffii HOM05D007024 ORTHO05D008865 1.1e-18 98.2 176 34.7
arahy.Tifrunner.gnm1.ann1.F27BB1 Arachis hypogaea HOM05D004917 ORTHO05D005954 3.4e-17 93.2 53 79.2
PRCOL_00004664 Prasinoderma coloniale HOM05D004917 ORTHO05D005954 2.2e-16 90.5 133 39.8
Zm00001eb030360 Zea mays HOM05D004917 ORTHO05D005954 1.4e-15 87.8 54 77.8
AagrBONN_evm.TU.Sc2ySwM_344.3825 Anthoceros agrestis HOM05D007024 ORTHO05D008865 1.0e-13 81.6 121 36.4
Gohir.A12G080465 Gossypium hirsutum HOM05D004917 ORTHO05D005954 1.0e-13 81.6 121 43.8
MCO06G061 Micromonas commoda HOM05D004917 ORTHO05D005954 5.1e-13 79.3 132 36.4
ATR0739G073 Amborella trichopoda HOM05D004917 ORTHO05D005954 1.1e-10 71.6 90 43.3
Cre17.g697050 Chlamydomonas reinhardtii HOM05D004917 ORTHO05D005954 1.4e-10 71.2 136 38.2
GSVIVG01007445001 Vitis vinifera HOM05D004917 ORTHO05D005954 3.4e-09 66.6 120 37.5
Haze_02356 Corylus avellana HOM05D004917 ORTHO05D005954 4.5e-09 66.2 51 64.7
MCO07G374 Micromonas commoda HOM05D004917 ORTHO05D005954 1.9e-07 60.8 84 40.5
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 4.7e-06 56.2 110 33.6


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