Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 5.0e-249 864.0 437 100.0
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 1.2e-175 620.2 449 71.3
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 4.4e-173 611.7 455 69.5
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 2.2e-172 609.4 426 72.3
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 1.6e-170 603.2 446 71.1
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 7.8e-170 600.9 424 72.6
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 5.1e-169 598.2 452 71.7
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 6.6e-169 597.8 454 68.5
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 7.3e-168 594.3 427 71.7
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 2.1e-167 592.8 413 73.6
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 4.7e-167 591.7 427 71.4
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 4.0e-166 588.6 456 70.2
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 5.3e-166 588.2 456 70.2
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 6.9e-166 587.8 446 68.8
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 9.0e-166 587.4 447 68.7
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 3.4e-165 585.5 451 67.2
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 1.3e-164 583.6 417 73.1
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 4.9e-164 581.6 445 68.8
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 3.2e-163 578.9 447 67.6
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 3.5e-162 575.5 419 69.2
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 1.3e-161 573.5 441 66.9
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 2.3e-161 572.8 391 72.9
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 9.6e-160 567.4 444 69.1
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 1.3e-159 567.0 451 68.3
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 2.4e-158 562.8 447 64.9
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.5e-157 560.1 386 72.5
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 1.4e-155 553.5 401 72.3
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 1.4e-155 553.5 444 66.2
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 1.2e-154 550.4 408 68.6
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 1.6e-154 550.1 442 64.7
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 7.9e-154 547.7 434 65.7
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 9.6e-152 540.8 445 64.3
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 6.2e-151 538.1 453 62.7
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 1.8e-150 536.6 436 64.7
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 1.3e-148 530.4 446 62.3
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 7.1e-147 524.6 443 63.4
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 1.8e-145 520.0 415 66.0
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 5.7e-144 515.0 410 64.9
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 6.2e-143 511.5 416 63.7
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 5.8e-141 505.0 442 60.9
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 7.6e-141 504.6 448 60.9
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 2.2e-140 503.1 417 63.8
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 2.9e-140 502.7 401 64.1
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 1.9e-139 500.0 406 62.8
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 4.6e-138 495.4 445 62.2
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 6.1e-138 495.0 448 60.3
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.0e-137 494.2 445 62.2
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 1.8e-137 493.4 447 60.2
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 3.0e-137 492.7 451 59.6
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 5.1e-137 491.9 392 62.8
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 2.5e-136 489.6 445 59.3
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 2.5e-136 489.6 445 59.8
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 4.3e-136 488.8 445 59.6
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 5.7e-136 488.4 411 62.8
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 1.6e-135 486.9 445 61.6
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 1.6e-135 486.9 445 59.3
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 1.6e-135 486.9 445 59.3
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 1.6e-135 486.9 445 58.9
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 1.6e-135 486.9 390 63.3
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 6.3e-135 485.0 419 61.1
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 8.2e-135 484.6 459 57.1
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 1.4e-134 483.8 443 58.7
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 1.5e-133 480.3 327 73.1
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 2.0e-133 479.9 442 59.3
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 3.4e-133 479.2 392 62.0
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 5.9e-133 478.4 451 57.9
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 1.3e-132 477.2 418 61.0
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 1.3e-132 477.2 453 57.4
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 8.5e-132 474.6 394 62.9
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 1.1e-131 474.2 392 60.5
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 2.5e-131 473.0 392 60.2
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 2.5e-131 473.0 453 57.2
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 3.2e-131 472.6 434 59.2
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 1.0e-129 467.6 442 57.5
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 3.0e-129 466.1 405 60.0
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 2.0e-128 463.4 403 59.3
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 3.3e-128 462.6 453 56.5
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 2.8e-127 459.5 409 59.2
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 1.1e-126 457.6 401 60.6
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 1.1e-126 457.6 404 60.4
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 2.4e-126 456.4 404 59.2
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 4.1e-126 455.7 461 54.4
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 1.2e-125 454.1 454 55.5
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 2.0e-125 453.4 400 60.2
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 1.9e-123 446.8 399 59.6
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 1.9e-123 446.8 399 59.6
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 3.2e-123 446.0 395 60.0
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 1.2e-122 444.1 450 55.3
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 1.8e-121 440.3 391 58.6
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 2.2e-119 433.3 460 53.9
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 2.8e-119 433.0 432 55.1
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 3.5e-117 426.0 464 52.2
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 1.5e-115 420.6 395 56.5
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 9.4e-115 417.9 342 61.4
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.2e-114 417.5 388 58.2
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 2.7e-114 416.4 398 54.5
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 1.1e-112 411.0 457 52.3
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 7.4e-112 408.3 378 57.1
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 2.6e-109 399.8 346 61.8
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 8.0e-106 388.3 445 52.1
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 3.0e-105 386.3 345 58.0
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 1.5e-104 384.0 296 69.3
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 7.5e-104 381.7 446 49.6
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.4e-102 377.5 362 55.5
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 1.0e-97 361.3 336 60.4
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 8.3e-95 351.7 444 47.3
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 6.1e-90 335.5 254 68.9
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 7.5e-88 328.6 227 72.2
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 8.6e-84 315.1 362 51.7
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 3.3e-83 313.2 408 45.3
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 2.2e-79 300.4 223 70.4
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 2.9e-79 300.1 359 50.7
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 4.7e-74 282.7 401 42.9
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 2.0e-72 277.3 265 60.4
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 5.4e-70 269.2 391 44.2
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 5.1e-68 262.7 443 42.9
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 1.7e-63 247.7 249 54.2
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 7.1e-54 215.7 391 38.1
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 1.3e-52 211.5 402 37.8
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 1.3e-50 204.9 405 36.8
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 4.8e-50 203.0 426 35.2
Cpa.g.sc162.21 Carica papaya HOM05D000369 ORTHO05D007562 1.1e-27 128.6 119 58.0
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 5.9e-24 116.3 247 36.0
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 1.5e-19 101.7 420 28.6
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 1.3e-18 98.6 75 64.0
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 6.3e-18 96.3 164 38.4
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 2.4e-17 94.4 216 33.8
PRCOL_00003529 Prasinoderma coloniale HOM05D006219 ORTHO05D007562 1.7e-15 88.2 383 25.3
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 2.9e-15 87.4 158 36.7
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 1.4e-14 85.1 421 25.7
TAR362G0073 Trochodendron aralioides HOM05D001652 ORTHO05D001768 6.3e-10 69.7 81 45.7


User provided reference genes

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