Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.845 Acer truncatum HOM05D005123 ORTHO05D006532 7.3e-52 206.8 97 100.0
Atru.chr2.852 Acer truncatum HOM05D005123 ORTHO05D006532 4.1e-47 191.0 96 94.8
Atru.BG.126.p Acer truncatum HOM05D005123 ORTHO05D006532 7.8e-38 160.2 94 81.9
vmacro13816 Vaccinium macrocarpon HOM05D005123 ORTHO05D006532 2.0e-33 145.6 93 73.1
GSVIVG01036232001 Vitis vinifera HOM05D005123 ORTHO05D006532 4.5e-33 144.4 94 70.2
Gohir.D11G185600 Gossypium hirsutum HOM05D005123 ORTHO05D006532 7.6e-33 143.7 100 65.0
Sabra05G0048700 Salix brachista HOM05D005123 ORTHO05D006532 1.3e-32 142.9 93 73.1
Eucgr.H04317 Eucalyptus grandis HOM05D005123 ORTHO05D006532 1.7e-32 142.5 93 73.1
Gorai.004G247100 Gossypium raimondii HOM05D005123 ORTHO05D006532 1.7e-32 142.5 94 69.1
Gohir.D02G179700 Gossypium hirsutum HOM05D005123 ORTHO05D006532 2.2e-32 142.1 94 68.1
Cfa006396 Carpinus fangiana HOM05D005123 ORTHO05D006532 2.9e-32 141.7 94 69.1
Gohir.D08G232600 Gossypium hirsutum HOM05D005123 ORTHO05D006532 2.9e-32 141.7 94 68.1
Gohir.A08G216000 Gossypium hirsutum HOM05D005123 ORTHO05D006532 4.9e-32 141.0 94 68.1
CSS0014237 Camellia sinensis var. sinensis HOM05D005123 ORTHO05D006532 8.4e-32 140.2 91 69.2
CSS0032730 Camellia sinensis var. sinensis HOM05D005123 ORTHO05D006532 8.4e-32 140.2 91 69.2
FvH4_4g17540 Fragaria vesca HOM05D005123 ORTHO05D006532 8.4e-32 140.2 93 68.8
FAN12G0393 Fragaria x ananassa HOM05D005123 ORTHO05D006532 8.4e-32 140.2 93 68.8
FAN12G0908 Fragaria x ananassa HOM05D005123 ORTHO05D006532 8.4e-32 140.2 93 68.8
Actinidia18366 Actinidia chinensis HOM05D005123 ORTHO05D006532 1.1e-31 139.8 94 68.1
Gohir.A13G075900 Gossypium hirsutum HOM05D005123 ORTHO05D006532 1.1e-31 139.8 79 73.4
Gohir.D01G029000 Gossypium hirsutum HOM05D005123 ORTHO05D006532 1.1e-31 139.8 79 73.4
Gohir.D08G124750 Gossypium hirsutum HOM05D005123 ORTHO05D006532 1.1e-31 139.8 79 73.4
TAR365G0219 Trochodendron aralioides HOM05D005123 ORTHO05D006532 1.1e-31 139.8 93 68.8
Haze_04379 Corylus avellana HOM05D005123 ORTHO05D006532 1.4e-31 139.4 79 74.7
Potri.005G055800 Populus trichocarpa HOM05D005123 ORTHO05D006532 1.4e-31 139.4 94 70.2
Manes.08G136400 Manihot esculenta HOM05D005123 ORTHO05D006532 3.2e-31 138.3 93 67.7
DCAR_006646 Daucus carota HOM05D005123 ORTHO05D006532 5.4e-31 137.5 93 71.0
Prupe.6G345400 Prunus persica HOM05D005123 ORTHO05D006532 5.4e-31 137.5 93 68.8
COL.COLO4_15380 Corchorus olitorius HOM05D005123 ORTHO05D006532 9.3e-31 136.7 94 67.0
Thecc.05G280500 Theobroma cacao HOM05D005123 ORTHO05D006532 9.3e-31 136.7 94 68.1
Dinv17936 Davidia involucrata HOM05D005123 ORTHO05D006532 1.2e-30 136.3 78 74.4
QL03p027727 Quercus lobata HOM05D005123 ORTHO05D006532 1.2e-30 136.3 79 74.7
Sc06g0003780 Simmondsia chinensis HOM05D005123 ORTHO05D006532 1.2e-30 136.3 93 67.7
TWI12G0989 Tripterygium wilfordii HOM05D005123 ORTHO05D006532 1.6e-30 136.0 93 66.7
Sed0022916 Sechium edule HOM05D005123 ORTHO05D006532 2.1e-30 135.6 78 71.8
RcHm_v2.0_Chr4g0421451 Rosa chinensis HOM05D005123 ORTHO05D006532 2.7e-30 135.2 93 66.7
Sopen01g040830 Solanum pennellii HOM05D005123 ORTHO05D006532 2.7e-30 135.2 78 74.4
FAN07G0296 Fragaria x ananassa HOM05D005123 ORTHO05D006532 3.5e-30 134.8 93 66.7
Solyc01g097160.3 Solanum lycopersicum HOM05D005123 ORTHO05D006532 3.5e-30 134.8 78 73.1
THA.LOC104802845 Tarenaya hassleriana HOM05D005123 ORTHO05D006532 3.5e-30 134.8 93 64.5
Lsat_1_v5_gn_0_36021 Lactuca sativa HOM05D005123 ORTHO05D006532 4.6e-30 134.4 94 64.9
MD04G1226700 Malus domestica HOM05D005123 ORTHO05D006532 7.9e-30 133.7 95 64.2
Nitab4.5_0010168g0020 Nicotiana tabacum HOM05D005123 ORTHO05D006532 7.9e-30 133.7 93 66.7
SalBow4G0099 Salvia bowleyana HOM05D005123 ORTHO05D006532 7.9e-30 133.7 93 66.7
Hma1.2p1_0817F.1_g223190 Hydrangea macrophylla HOM05D005123 ORTHO05D006532 1.0e-29 133.3 93 68.8
arahy.Tifrunner.gnm1.ann1.01P7ER Arachis hypogaea HOM05D005123 ORTHO05D006532 1.3e-29 132.9 93 65.6
arahy.Tifrunner.gnm1.ann1.9VED02 Arachis hypogaea HOM05D005123 ORTHO05D006532 1.3e-29 132.9 93 65.6
Cpa.g.sc736.2 Carica papaya HOM05D005123 ORTHO05D006532 1.3e-29 132.9 94 66.0
HanXRQChr09g0259781 Helianthus annuus HOM05D005123 ORTHO05D006532 1.3e-29 132.9 94 63.8
CsaV3_2G003960 Cucumis sativus L. HOM05D005123 ORTHO05D006532 2.3e-29 132.1 93 65.6
Duzib177G0775 Durio zibethinus HOM05D005123 ORTHO05D006532 2.3e-29 132.1 75 74.7
PGSC0003DMG400027514 Solanum tuberosum HOM05D005123 ORTHO05D006532 3.0e-29 131.7 78 71.8
Lj1g0023983 Lotus japonicus HOM05D005123 ORTHO05D006532 3.9e-29 131.3 93 64.5
MELO3C004395.2 Cucumis melo HOM05D005123 ORTHO05D006532 5.1e-29 131.0 78 71.8
Medtr7g115310 Medicago truncatula HOM05D005123 ORTHO05D006532 5.1e-29 131.0 93 64.5
Peaxi162Scf00282g00718 Petunia axillaris HOM05D005123 ORTHO05D006532 5.1e-29 131.0 93 65.6
CANSAT54G2420 Cannabis sativa HOM05D005123 ORTHO05D006532 6.7e-29 130.6 78 71.8
Cc02_g30910 Coffea canephora HOM05D005123 ORTHO05D006532 6.7e-29 130.6 97 61.9
SalBow4G1942 Salvia bowleyana HOM05D005123 ORTHO05D006532 6.7e-29 130.6 93 65.6
EL10Ac4g09082 Beta vulgaris HOM05D005123 ORTHO05D006532 8.7e-29 130.2 93 63.4
CAN.G134.75 Capsicum annuum HOM05D005123 ORTHO05D006532 8.7e-29 130.2 78 70.5
ECA232G3987 Erigeron canadensis HOM05D005123 ORTHO05D006532 1.9e-28 129.0 94 64.9
PSO170G0405 Papaver somniferum HOM05D005123 ORTHO05D006532 1.9e-28 129.0 78 70.5
Aa31LG5G15060 Aethionema arabicum HOM05D005123 ORTHO05D006532 2.5e-28 128.6 93 63.4
Aqoxy5G00319 Aquilegia oxysepala HOM05D005123 ORTHO05D006532 2.5e-28 128.6 79 69.6
Ah.04g162190 Amaranthus hybridus HOM05D005123 ORTHO05D006532 3.3e-28 128.3 93 64.5
Ca_09430_v3 Cicer arietinum L. HOM05D005123 ORTHO05D006532 3.3e-28 128.3 93 62.4
PSO063G6470 Papaver somniferum HOM05D005123 ORTHO05D006532 3.3e-28 128.3 78 70.5
Oeu038460.1 Olea europaea HOM05D005123 ORTHO05D006532 4.3e-28 127.9 94 64.9
CiPaw.08G122000 Carya illinoinensis HOM05D005123 ORTHO05D006532 5.6e-28 127.5 79 72.2
TPR.G6919 Trifolium pratense HOM05D005123 ORTHO05D006532 5.6e-28 127.5 93 61.3
unitig_0.g2303 Utricularia gibba HOM05D005123 ORTHO05D006532 5.6e-28 127.5 90 63.3
AUR62001056 Chenopodium quinoa HOM05D005123 ORTHO05D006532 2.1e-27 125.6 78 67.9
AUR62004896 Chenopodium quinoa HOM05D005123 ORTHO05D006532 2.1e-27 125.6 78 67.9
ClCG02G016790 Citrullus lanatus HOM05D005123 ORTHO05D006532 2.1e-27 125.6 93 63.4
Migut.N01919 Erythranthe guttata HOM05D005123 ORTHO05D006532 2.8e-27 125.2 93 66.7
Sp3g03490 Schrenkiella parvula HOM05D005123 ORTHO05D006532 3.7e-27 124.8 95 63.2
MSTRG.5089 Avicennia marina HOM05D005123 ORTHO05D006532 4.8e-27 124.4 93 63.4
Glyma.19G245900 Glycine max HOM05D005123 ORTHO05D006532 4.8e-27 124.4 93 61.3
Gorai.004G247500 Gossypium raimondii HOM05D005123 ORTHO05D006532 4.8e-27 124.4 91 63.7
SGA_v2.0_scaffold80G25897 Striga asiatica HOM05D005123 ORTHO05D006532 4.8e-27 124.4 83 66.3
Lalb_Chr18g0043951 Lupinus albus HOM05D005123 ORTHO05D006532 6.2e-27 124.0 78 65.4
Phvul.006G102800 Phaseolus vulgaris HOM05D005123 ORTHO05D006532 6.2e-27 124.0 93 62.4
Thhalv10020605m.g Eutrema salsugineum HOM05D005123 ORTHO05D006532 8.1e-27 123.6 95 62.1
Psat0s169g0040 Pisum sativum HOM05D005123 ORTHO05D006532 8.1e-27 123.6 93 62.4
BcaB04g19310 Brassica carinata HOM05D005123 ORTHO05D006532 1.1e-26 123.2 95 62.1
VMungo0540G0367 Vigna mungo HOM05D005123 ORTHO05D006532 2.4e-26 122.1 93 62.4
AT3G04650 Arabidopsis thaliana HOM05D005123 ORTHO05D006532 3.1e-26 121.7 94 61.7
BcaC01g04358 Brassica carinata HOM05D005123 ORTHO05D006532 4.0e-26 121.3 94 61.7
C03p41060 Brassica napus HOM05D005123 ORTHO05D006532 4.0e-26 121.3 94 61.7
BolC3t16395H Brassica oleracea HOM05D005123 ORTHO05D006532 4.0e-26 121.3 94 61.7
AL3G14690 Arabidopsis lyrata HOM05D005123 ORTHO05D006532 5.3e-26 120.9 94 61.7
A03p33760 Brassica napus HOM05D005123 ORTHO05D006532 5.3e-26 120.9 94 60.6
BraA03t12549Z Brassica rapa HOM05D005123 ORTHO05D006532 5.3e-26 120.9 94 60.6
Carub.0003s0381 Capsella rubella HOM05D005123 ORTHO05D006532 5.3e-26 120.9 95 60.0
PGR004G1863 Punica granatum HOM05D005123 ORTHO05D006532 9.0e-26 120.2 94 66.0
Hund06950 Selenicereus undatus HOM05D005123 ORTHO05D006532 9.0e-26 120.2 93 61.3
Zm00001eb030960 Zea mays HOM05D005123 ORTHO05D006532 4.5e-25 117.9 94 56.4
CARHR078850 Cardamine hirsuta HOM05D005123 ORTHO05D006532 5.8e-25 117.5 95 57.9
ATR0665G099 Amborella trichopoda HOM05D005123 ORTHO05D006532 7.6e-25 117.1 79 63.3
Os12g0597400 Oryza sativa ssp. japonica HOM05D005123 ORTHO05D006532 9.9e-25 116.7 95 56.8
HPP92_026486 Vanilla planifolia HOM05D005123 ORTHO05D006532 3.2e-23 111.7 96 56.2
HPP92_014225 Vanilla planifolia HOM05D005123 ORTHO05D006532 4.2e-23 111.3 96 56.2
Rhsim07G0074600 Rhododendron simsii HOM05D005123 ORTHO05D006532 5.5e-23 110.9 93 61.3
Lj9C664G10 Lonicera japonica HOM05D005123 ORTHO05D006532 5.6e-20 100.9 59 74.6
Pp3c3_15330 Physcomitrium patens HOM05D005123 ORTHO05D006532 6.9e-18 94.0 79 45.6
AUR62044106 Chenopodium quinoa HOM05D005123 ORTHO05D006532 4.5e-17 91.3 53 71.7
Nn1g02615 Nelumbo nucifera HOM05D005123 ORTHO05D006532 2.2e-16 89.0 60 70.0
Mapoly0079s0067 Marchantia polymorpha HOM05D005123 ORTHO05D006532 4.9e-16 87.8 78 50.0
AagrBONN_evm.TU.Sc2ySwM_228.1429 Anthoceros agrestis HOM05D005123 ORTHO05D006532 5.5e-15 84.3 77 50.6
Nitab4.5_0002247g0050 Nicotiana tabacum HOM05D005123 ORTHO05D006532 2.7e-14 82.0 47 74.5
Gohir.D08G233000 Gossypium hirsutum HOM05D005123 ORTHO05D006532 3.5e-14 81.6 67 59.7
CBR_g26324 Chara braunii HOM05D005123 ORTHO05D006532 1.5e-12 76.3 81 42.0
SMO367G1262 Selaginella moellendorffii HOM05D005123 ORTHO05D006532 2.2e-11 72.4 71 43.7
SEGI_30682 Sequoiadendron giganteum HOM05D005123 ORTHO05D006532 1.1e-10 70.1 40 67.5
Cre03.g207150 Chlamydomonas reinhardtii HOM05D005123 ORTHO05D006532 3.4e-09 65.1 83 42.2
Ciclev10030138m.g Citrus clementina HOM05D005123 ORTHO05D006532 5.9e-09 64.3 37 75.7
MCO15G267 Micromonas commoda HOM05D005123 ORTHO05D006532 3.8e-08 61.6 78 41.0
Gohir.A07G068900 Gossypium hirsutum HOM05D005123 ORTHO05D006532 3.2e-07 58.5 37 62.2


User provided reference genes

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