Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.826 Acer truncatum HOM05D004252 ORTHO05D005101 8.3e-76 287.0 145 100.0
Ciclev10000014m.g Citrus clementina HOM05D004252 ORTHO05D005101 1.9e-56 222.6 123 92.7
Gohir.D08G232300 Gossypium hirsutum HOM05D004252 ORTHO05D005101 2.1e-55 219.2 123 90.2
Gorai.004G246800 Gossypium raimondii HOM05D004252 ORTHO05D005101 2.1e-55 219.2 123 90.2
COL.COLO4_15351 Corchorus olitorius HOM05D004252 ORTHO05D005101 3.6e-55 218.4 144 77.8
Gohir.A08G215700 Gossypium hirsutum HOM05D004252 ORTHO05D005101 6.2e-55 217.6 123 90.2
Duzib128G1785 Durio zibethinus HOM05D004252 ORTHO05D005101 1.1e-54 216.9 123 89.4
Thecc.05G283200 Theobroma cacao HOM05D004252 ORTHO05D005101 1.4e-54 216.5 123 89.4
Hund06974 Selenicereus undatus HOM05D004252 ORTHO05D005101 1.8e-54 216.1 144 77.8
Duzib177G1152 Durio zibethinus HOM05D004252 ORTHO05D005101 1.2e-53 213.4 123 87.8
Dinv20302 Davidia involucrata HOM05D004252 ORTHO05D005101 1.5e-53 213.0 144 75.7
Eucgr.B02119 Eucalyptus grandis HOM05D004252 ORTHO05D005101 3.4e-53 211.8 122 87.7
Nn3g19509 Nelumbo nucifera HOM05D004252 ORTHO05D005101 3.4e-53 211.8 123 87.8
CANSAT54G1217 Cannabis sativa HOM05D004252 ORTHO05D005101 4.4e-53 211.5 143 74.8
TWI12G0933 Tripterygium wilfordii HOM05D004252 ORTHO05D005101 9.9e-53 210.3 123 87.8
TAR362G1238 Trochodendron aralioides HOM05D004252 ORTHO05D005101 2.2e-52 209.1 123 85.4
EL10Ac4g09148 Beta vulgaris HOM05D004252 ORTHO05D005101 2.9e-52 208.8 144 75.7
CAN.G134.97 Capsicum annuum HOM05D004252 ORTHO05D005101 2.9e-52 208.8 144 74.3
Cc02_g30700 Coffea canephora HOM05D004252 ORTHO05D005101 3.8e-52 208.4 144 72.9
Actinidia32806 Actinidia chinensis HOM05D004252 ORTHO05D005101 1.1e-51 206.8 138 77.5
CSS0026350 Camellia sinensis var. sinensis HOM05D004252 ORTHO05D005101 1.1e-51 206.8 123 84.6
Nitab4.5_0008996g0010 Nicotiana tabacum HOM05D004252 ORTHO05D005101 1.4e-51 206.5 144 72.9
GSVIVG01021781001 Vitis vinifera HOM05D004252 ORTHO05D005101 1.4e-51 206.5 123 85.4
TAR633G0655 Trochodendron aralioides HOM05D004252 ORTHO05D005101 1.9e-51 206.1 123 84.6
Lj1A1079G39 Lonicera japonica HOM05D004252 ORTHO05D005101 3.2e-51 205.3 123 83.7
Sc20g0000330 Simmondsia chinensis HOM05D004252 ORTHO05D005101 3.2e-51 205.3 144 74.3
Solyc01g097320.3 Solanum lycopersicum HOM05D004252 ORTHO05D005101 4.1e-51 204.9 144 73.6
THA.LOC104818630 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 4.1e-51 204.9 123 84.6
PGR142G2894 Punica granatum HOM05D004252 ORTHO05D005101 7.1e-51 204.1 122 86.1
Manes.09G152800 Manihot esculenta HOM05D004252 ORTHO05D005101 9.2e-51 203.8 123 82.9
HanXRQChr03g0080781 Helianthus annuus HOM05D004252 ORTHO05D005101 1.2e-50 203.4 123 82.1
Sabra13G0038000 Salix brachista HOM05D004252 ORTHO05D005101 1.2e-50 203.4 123 84.6
Cfa006427 Carpinus fangiana HOM05D004252 ORTHO05D005101 1.6e-50 203.0 145 74.5
ECA240G2739 Erigeron canadensis HOM05D004252 ORTHO05D005101 1.6e-50 203.0 123 82.1
Thhalv10019885m.g Eutrema salsugineum HOM05D004252 ORTHO05D005101 2.1e-50 202.6 123 82.1
Peaxi162Scf00282g00418 Petunia axillaris HOM05D004252 ORTHO05D005101 2.1e-50 202.6 145 73.1
CDE02G2007 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 2.7e-50 202.2 123 80.5
Aa31LG5G15140 Aethionema arabicum HOM05D004252 ORTHO05D005101 3.5e-50 201.8 123 80.5
Haze_04358 Corylus avellana HOM05D004252 ORTHO05D005101 3.5e-50 201.8 145 73.8
Potri.013G041201 Populus trichocarpa HOM05D004252 ORTHO05D005101 3.5e-50 201.8 123 83.7
Aqoxy5G01125 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 4.6e-50 201.4 123 83.7
ClCG02G016630 Citrullus lanatus HOM05D004252 ORTHO05D005101 4.6e-50 201.4 122 82.0
Lsat_1_v5_gn_5_53600 Lactuca sativa HOM05D004252 ORTHO05D005101 4.6e-50 201.4 123 82.9
Potri.005G053700 Populus trichocarpa HOM05D004252 ORTHO05D005101 6.0e-50 201.1 123 82.9
THA.LOC104821672 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 6.0e-50 201.1 123 83.7
CDE06G0814 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 7.8e-50 200.7 123 79.7
HanXRQChr13g0411361 Helianthus annuus HOM05D004252 ORTHO05D005101 7.8e-50 200.7 123 81.3
Ah.06g192380 Amaranthus hybridus HOM05D004252 ORTHO05D005101 2.3e-49 199.1 144 71.5
MD12G1241600 Malus domestica HOM05D004252 ORTHO05D005101 2.3e-49 199.1 144 71.5
CiPaw.08G123300 Carya illinoinensis HOM05D004252 ORTHO05D005101 3.0e-49 198.7 148 71.6
Dinv08153 Davidia involucrata HOM05D004252 ORTHO05D005101 3.0e-49 198.7 136 79.4
MD04G1224900 Malus domestica HOM05D004252 ORTHO05D005101 3.0e-49 198.7 144 71.5
Sabra05G0047100 Salix brachista HOM05D004252 ORTHO05D005101 3.0e-49 198.7 123 82.1
SalBow3G2512 Salvia bowleyana HOM05D004252 ORTHO05D005101 3.0e-49 198.7 145 71.7
Migut.B01091 Erythranthe guttata HOM05D004252 ORTHO05D005101 3.9e-49 198.4 145 71.7
Aqoxy6G01279 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 8.7e-49 197.2 123 81.3
CsaV3_2G004140 Cucumis sativus L. HOM05D004252 ORTHO05D005101 8.7e-49 197.2 122 79.5
AT3G04740 Arabidopsis thaliana HOM05D004252 ORTHO05D005101 1.9e-48 196.1 123 79.7
Sp3g03590 Schrenkiella parvula HOM05D004252 ORTHO05D005101 1.9e-48 196.1 123 78.9
Prupe.6G343600 Prunus persica HOM05D004252 ORTHO05D005101 2.5e-48 195.7 123 81.3
AL3G14870 Arabidopsis lyrata HOM05D004252 ORTHO05D005101 3.3e-48 195.3 123 79.7
FAN02G2888 Fragaria x ananassa HOM05D004252 ORTHO05D005101 3.3e-48 195.3 124 81.5
PSO832G2970 Papaver somniferum HOM05D004252 ORTHO05D005101 4.3e-48 194.9 123 78.0
vmacro20358 Vaccinium macrocarpon HOM05D004252 ORTHO05D005101 5.6e-48 194.5 124 81.5
FvH4_6g02880 Fragaria vesca HOM05D004252 ORTHO05D005101 9.6e-48 193.7 124 80.6
FAN14G3887 Fragaria x ananassa HOM05D004252 ORTHO05D005101 9.6e-48 193.7 124 80.6
PSO210G6431 Papaver somniferum HOM05D004252 ORTHO05D005101 9.6e-48 193.7 123 78.0
QL03p026982 Quercus lobata HOM05D004252 ORTHO05D005101 1.2e-47 193.4 158 68.4
RcHm_v2.0_Chr3g0451091 Rosa chinensis HOM05D004252 ORTHO05D005101 1.2e-47 193.4 124 80.6
A05p42820 Brassica napus HOM05D004252 ORTHO05D005101 1.6e-47 193.0 123 80.5
C05p62540 Brassica napus HOM05D004252 ORTHO05D005101 1.6e-47 193.0 123 80.5
BolC5t34909H Brassica oleracea HOM05D004252 ORTHO05D005101 1.6e-47 193.0 123 80.5
FAN05G2119 Fragaria x ananassa HOM05D004252 ORTHO05D005101 1.6e-47 193.0 124 79.8
FAN09G2874 Fragaria x ananassa HOM05D004252 ORTHO05D005101 2.1e-47 192.6 124 79.8
DCAR_014751 Daucus carota HOM05D004252 ORTHO05D005101 2.8e-47 192.2 123 81.3
Carub.0003s0391 Capsella rubella HOM05D004252 ORTHO05D005101 3.6e-47 191.8 123 78.9
arahy.Tifrunner.gnm1.ann1.9CBY7M Arachis hypogaea HOM05D004252 ORTHO05D005101 2.4e-46 189.1 122 75.4
AUR62004951 Chenopodium quinoa HOM05D004252 ORTHO05D005101 3.1e-46 188.7 144 71.5
Glyma.03G247300 Glycine max HOM05D004252 ORTHO05D005101 4.0e-46 188.3 122 74.6
arahy.Tifrunner.gnm1.ann1.39XKQR Arachis hypogaea HOM05D004252 ORTHO05D005101 5.2e-46 188.0 122 74.6
Lj1g0020341 Lotus japonicus HOM05D004252 ORTHO05D005101 5.2e-46 188.0 122 73.8
Phvul.006G101900 Phaseolus vulgaris HOM05D004252 ORTHO05D005101 1.2e-45 186.8 122 73.8
DCAR_023243 Daucus carota HOM05D004252 ORTHO05D005101 1.5e-45 186.4 123 74.8
Rhsim04G0066800 Rhododendron simsii HOM05D004252 ORTHO05D005101 1.5e-45 186.4 124 78.2
TPR.G6924 Trifolium pratense HOM05D004252 ORTHO05D005101 1.5e-45 186.4 122 73.8
Medtr7g115190 Medicago truncatula HOM05D004252 ORTHO05D005101 2.0e-45 186.0 122 73.0
ATR0665G632 Amborella trichopoda HOM05D004252 ORTHO05D005101 2.6e-45 185.7 121 78.5
VMungo0540G0159 Vigna mungo HOM05D004252 ORTHO05D005101 2.6e-45 185.7 122 73.0
Psat3g007080 Pisum sativum HOM05D004252 ORTHO05D005101 4.4e-45 184.9 123 72.4
Glyma.19G245100 Glycine max HOM05D004252 ORTHO05D005101 7.6e-45 184.1 122 73.0
HPP92_026425 Vanilla planifolia HOM05D004252 ORTHO05D005101 9.9e-45 183.7 138 68.8
BcaB04g19300 Brassica carinata HOM05D004252 ORTHO05D005101 1.3e-44 183.3 123 74.0
Sed0020402 Sechium edule HOM05D004252 ORTHO05D005101 1.3e-44 183.3 122 76.2
Os08g0332800 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 1.7e-44 183.0 126 76.2
Lalb_Chr04g0262241 Lupinus albus HOM05D004252 ORTHO05D005101 2.2e-44 182.6 122 72.1
unitig_699.g19676 Utricularia gibba HOM05D004252 ORTHO05D005101 2.9e-44 182.2 131 71.8
arahy.Tifrunner.gnm1.ann1.QZ0BKE Arachis hypogaea HOM05D004252 ORTHO05D005101 4.9e-44 181.4 122 73.8
BraA05t22970Z Brassica rapa HOM05D004252 ORTHO05D005101 8.4e-44 180.6 144 68.8
Os09g0281900 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 2.4e-43 179.1 132 69.7
arahy.Tifrunner.gnm1.ann1.YD0KDM Arachis hypogaea HOM05D004252 ORTHO05D005101 4.2e-43 178.3 122 72.1
Sed0025221 Sechium edule HOM05D004252 ORTHO05D005101 9.3e-43 177.2 122 74.6
Ca_09423_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 1.2e-42 176.8 133 66.9
Ca_29790_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 1.2e-42 176.8 133 66.9
Medtr1g087060 Medicago truncatula HOM05D004252 ORTHO05D005101 3.5e-42 175.3 123 69.9
CiPaw.07G067400 Carya illinoinensis HOM05D004252 ORTHO05D005101 4.6e-42 174.9 133 71.4
arahy.Tifrunner.gnm1.ann1.795G7S Arachis hypogaea HOM05D004252 ORTHO05D005101 1.0e-41 173.7 126 69.8
Zm00001eb097360 Zea mays HOM05D004252 ORTHO05D005101 2.3e-41 172.6 135 68.1
MELO3C004380.2 Cucumis melo HOM05D004252 ORTHO05D005101 3.0e-41 172.2 179 54.7
Mapoly0110s0011 Marchantia polymorpha HOM05D004252 ORTHO05D005101 4.2e-35 151.8 134 57.5
SHI18417 Sapria himalayana HOM05D004252 ORTHO05D005101 3.0e-33 145.6 184 47.8
SMO118G0536 Selaginella moellendorffii HOM05D004252 ORTHO05D005101 3.0e-33 145.6 118 60.2
Pp3c9_4280 Physcomitrium patens HOM05D004252 ORTHO05D005101 6.7e-33 144.4 116 63.8
Pp3c9_5080 Physcomitrium patens HOM05D004252 ORTHO05D005101 1.5e-32 143.3 131 56.5
AagrBONN_evm.TU.Sc2ySwM_368.2529 Anthoceros agrestis HOM05D004252 ORTHO05D005101 1.6e-31 139.8 119 57.1
Cpa.g.sc1346.1 Carica papaya HOM05D004252 ORTHO05D005101 2.1e-23 112.8 70 85.7
Nitab4.5_0001592g0060 Nicotiana tabacum HOM05D004252 ORTHO05D005101 5.3e-22 108.2 74 70.3
Cpa.g.c42029 Carica papaya HOM05D004252 ORTHO05D005101 1.5e-21 106.7 53 96.2
Oeu027472.1 Olea europaea HOM05D004252 ORTHO05D005101 1.5e-21 106.7 54 92.6
Sopen00g013550 Solanum pennellii HOM05D004252 ORTHO05D005101 4.5e-21 105.1 71 77.5
AUR62001006 Chenopodium quinoa HOM05D004252 ORTHO05D005101 6.5e-20 101.3 144 47.2
CAN.G1116.5 Capsicum annuum HOM05D004252 ORTHO05D005101 5.5e-19 98.2 70 71.4
SEGI_02854 Sequoiadendron giganteum HOM05D004252 ORTHO05D005101 1.4e-14 83.6 70 61.4
MCO11G870 Micromonas commoda HOM05D004252 ORTHO05D005101 6.3e-07 58.2 118 30.5


User provided reference genes

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