Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.68 Acer truncatum HOM05D002599 ORTHO05D001895 1.5e-74 282.7 135 100.0
Atru.chr2.63 Acer truncatum HOM05D002599 ORTHO05D001895 4.4e-39 164.9 90 86.7
Atru.chr2.65 Acer truncatum HOM05D002599 ORTHO05D001895 4.7e-33 144.8 115 60.9
Atru.chr2.67 Acer truncatum HOM05D002599 ORTHO05D001895 3.5e-28 128.6 127 52.0
Atru.chr2.66 Acer truncatum HOM05D002599 ORTHO05D001895 3.0e-27 125.6 126 48.4
Atru.chr3.612 Acer truncatum HOM05D002599 ORTHO05D001895 2.4e-16 89.4 131 43.5
Atru.chr3.613 Acer truncatum HOM05D002599 ORTHO05D001895 7.6e-15 84.3 121 43.8
Atru.chr6.1076 Acer truncatum HOM05D008886 ORTHO05D001895 3.2e-13 79.0 123 41.5
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.9e-11 72.0 120 35.0
Atru.chr6.323 Acer truncatum HOM05D002599 ORTHO05D001895 1.5e-10 70.1 100 39.0
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.5e-10 70.1 120 35.0
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 1.9e-10 69.7 119 36.1
Thecc.02G023500 Theobroma cacao HOM05D002599 ORTHO05D001895 3.3e-10 68.9 109 38.5
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.6e-10 68.2 120 38.3
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.3e-09 67.0 120 38.3
Gorai.005G241300 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.3e-09 67.0 87 40.2
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.6e-09 66.6 120 38.3
Thecc.02G018800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-09 66.6 106 34.0
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-09 66.6 88 44.3
Gohir.A03G192400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.1e-09 66.2 87 40.2
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.1e-09 66.2 109 32.1
Gorai.005G241200 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.8e-09 65.9 87 39.1
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.8e-09 65.9 125 32.0
COL.COLO4_17753 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.7e-09 65.5 81 44.4
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.7e-09 65.5 84 36.9
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.7e-09 65.5 84 36.9
Thecc.02G024800 Theobroma cacao HOM05D002599 ORTHO05D001895 3.7e-09 65.5 86 37.2
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 4.8e-09 65.1 120 34.2
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 4.8e-09 65.1 106 33.0
Gohir.A03G214900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.2e-09 64.7 106 34.9
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 6.2e-09 64.7 122 34.4
Thecc.02G091200 Theobroma cacao HOM05D002599 ORTHO05D001895 6.2e-09 64.7 88 43.2
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.2e-09 64.3 92 37.0
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 8.2e-09 64.3 119 34.5
AUR62019765 Chenopodium quinoa HOM05D002599 ORTHO05D001895 1.1e-08 63.9 82 41.5
Potri.015G016100 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-08 63.5 109 31.2
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.8e-08 63.2 109 35.8
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 1.8e-08 63.2 113 33.6
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 1.8e-08 63.2 124 32.3
Potri.003G010700 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.4e-08 62.8 90 35.6
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.4e-08 62.8 107 33.6
Sabra15G0013000 Salix brachista HOM05D002599 ORTHO05D001895 2.4e-08 62.8 106 32.1
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 2.4e-08 62.8 100 33.0
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.1e-08 62.4 106 34.0
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-08 62.4 84 40.5
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 3.1e-08 62.4 100 34.0
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.0e-08 62.0 107 34.6
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.3e-08 61.6 112 33.9
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 5.3e-08 61.6 94 31.9
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 5.3e-08 61.6 113 31.0
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 5.3e-08 61.6 119 32.8
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 5.3e-08 61.6 120 33.3
Gohir.A03G192100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.9e-08 61.2 106 38.7
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.9e-08 61.2 90 35.6
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.0e-08 60.8 108 34.3
Ciclev10003967m.g Citrus clementina HOM05D022543 ORTHO05D001895 1.5e-07 60.1 107 32.7
COL.COLO4_17742 Corchorus olitorius HOM05D002599 ORTHO05D012670 1.5e-07 60.1 108 30.6
Sabra12G0018100 Salix brachista HOM05D002599 ORTHO05D001895 1.5e-07 60.1 85 37.6
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.0e-07 59.7 106 33.0
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 2.0e-07 59.7 111 34.2
Thecc.07G108300 Theobroma cacao HOM05D009888 ORTHO05D001895 2.0e-07 59.7 87 35.6
Potri.015G016000 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.6e-07 59.3 110 31.8
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.5e-07 58.5 108 37.0
Thecc.07G108700 Theobroma cacao HOM05D002599 ORTHO05D001895 4.5e-07 58.5 106 33.0
Gohir.D01G042900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.8e-07 58.2 93 32.3
Gorai.002G061900 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.8e-07 58.2 93 32.3
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 5.8e-07 58.2 109 33.9
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 5.8e-07 58.2 81 37.0
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 7.6e-07 57.8 119 31.1
Gohir.D03G021100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.6e-07 57.8 85 38.8
Gorai.003G022700 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.6e-07 57.8 85 38.8
Potri.014G067900 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.6e-07 57.8 110 35.5
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.6e-07 57.8 107 32.7
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.0e-06 57.4 106 31.1
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 1.0e-06 57.4 106 35.8
Thecc.02G022300 Theobroma cacao HOM05D002599 ORTHO05D012670 1.0e-06 57.4 105 32.4
Thecc.02G022600 Theobroma cacao HOM05D002599 ORTHO05D012670 1.0e-06 57.4 105 32.4
Ciclev10024116m.g Citrus clementina HOM05D002599 ORTHO05D001895 1.3e-06 57.0 83 36.1
Gohir.A02G159400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-06 57.0 85 36.5
Thecc.02G023200 Theobroma cacao HOM05D002599 ORTHO05D012670 1.3e-06 57.0 103 32.0
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 1.3e-06 57.0 119 31.9
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.7e-06 56.6 106 31.1
Potri.007G099100 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.7e-06 56.6 110 34.5
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.7e-06 56.6 86 36.0
Thecc.02G022700 Theobroma cacao HOM05D002599 ORTHO05D012670 1.7e-06 56.6 105 31.4
Gohir.D02G213400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.2e-06 56.2 66 40.9
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.2e-06 56.2 107 30.8
Thecc.07G108400 Theobroma cacao HOM05D002599 ORTHO05D001895 2.2e-06 56.2 83 34.9
Atru.chr13.1023 Acer truncatum HOM05D008353 ORTHO05D001895 2.9e-06 55.8 120 31.7
COL.COLO4_29044 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.9e-06 55.8 83 34.9
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 2.9e-06 55.8 91 31.9
Thecc.02G024100 Theobroma cacao HOM05D002599 ORTHO05D012670 2.9e-06 55.8 105 31.4
Gohir.D02G213300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.9e-06 55.1 66 39.4
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.9e-06 55.1 89 33.7
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 4.9e-06 55.1 104 33.7
Gohir.A01G056400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.5e-06 54.7 93 31.2
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 6.5e-06 54.7 106 34.0
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 8.4e-06 54.3 111 30.6


User provided reference genes

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