Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.648 Acer truncatum HOM05D009433 ORTHO05D010667 3.9e-191 671.4 364 100.0
Ciclev10001604m.g Citrus clementina HOM05D009433 ORTHO05D010667 2.4e-55 220.3 324 50.3
Thecc.05G291900 Theobroma cacao HOM05D009433 ORTHO05D010667 5.0e-45 186.0 344 41.9
Potri.013G032900 Populus trichocarpa HOM05D009433 ORTHO05D010667 7.2e-44 182.2 320 40.6
Actinidia30913 Actinidia chinensis HOM05D014961 ORTHO05D010667 2.3e-42 177.2 321 43.0
GSVIVG01021903001 Vitis vinifera HOM05D009433 ORTHO05D010667 2.2e-40 170.6 320 38.4
Actinidia05752 Actinidia chinensis HOM05D014961 ORTHO05D010667 4.9e-40 169.5 352 37.2
Dinv17748 Davidia involucrata HOM05D014961 ORTHO05D010667 2.3e-37 160.6 284 42.6
Cpa.g.sc117.35 Carica papaya HOM05D009433 ORTHO05D010667 4.2e-36 156.4 371 35.3
Hma1.2p1_0083F.1_g042640 Hydrangea macrophylla HOM05D014961 ORTHO05D010667 1.0e-34 151.8 331 36.3
QL03p000754 Quercus lobata HOM05D009433 ORTHO05D010667 1.0e-34 151.8 418 33.7
TAR362G0181 Trochodendron aralioides HOM05D009433 ORTHO05D010667 2.3e-34 150.6 315 36.8
CiPaw.08G177600 Carya illinoinensis HOM05D009433 ORTHO05D010667 2.0e-33 147.5 369 36.9
Manes.08G126300 Manihot esculenta HOM05D009433 ORTHO05D010667 4.1e-31 139.8 338 34.9
CiPaw.07G009700 Carya illinoinensis HOM05D009433 ORTHO05D010667 1.6e-30 137.9 310 36.1
Aqoxy5G00608 Aquilegia oxysepala HOM05D009433 ORTHO05D010667 1.5e-28 131.3 339 32.7
Sabra13G0032700 Salix brachista HOM05D009433 ORTHO05D010667 2.5e-28 130.6 311 34.7
COL.COLO4_13630 Corchorus olitorius HOM05D009433 ORTHO05D010667 4.3e-28 129.8 390 35.9
Prupe.6G336600 Prunus persica HOM05D014796 ORTHO05D010667 5.6e-28 129.4 306 38.9
Gohir.D13G176900 Gossypium hirsutum HOM05D009433 ORTHO05D010667 1.8e-26 124.4 368 33.4
Potri.005G047000 Populus trichocarpa HOM05D009433 ORTHO05D010667 1.8e-26 124.4 306 34.6
Dinv03360 Davidia involucrata HOM05D002010 ORTHO05D001602 5.2e-26 122.9 332 35.2
Gorai.013G202300 Gossypium raimondii HOM05D009433 ORTHO05D010667 1.2e-25 121.7 368 33.4
Haze_04298 Corylus avellana HOM05D009433 ORTHO05D010667 2.6e-25 120.6 453 30.7
Cfa006491 Carpinus fangiana HOM05D009433 ORTHO05D010667 1.3e-24 118.2 192 41.7
CiPaw.07G009500 Carya illinoinensis HOM05D009433 ORTHO05D010667 7.0e-23 112.5 316 32.9
Gohir.A13G171500 Gossypium hirsutum HOM05D009433 ORTHO05D010667 1.5e-20 104.8 380 31.3
CSS0022263 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 4.7e-19 99.8 316 31.6
Duzib128G0350 Durio zibethinus HOM05D009433 ORTHO05D010667 1.1e-18 98.6 148 43.9
CSS0038751 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 3.1e-18 97.1 314 32.5
Sabra05G0042800 Salix brachista HOM05D009433 ORTHO05D010667 6.8e-18 95.9 312 30.4
Nn4g26003 Nelumbo nucifera HOM05D009433 ORTHO05D010667 2.0e-17 94.4 286 30.4
CSS0040293 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 1.7e-16 91.3 339 31.0
Rhsim10G0110300 Rhododendron simsii HOM05D000105 ORTHO05D010667 3.7e-16 90.1 179 35.8
Cc02_g31110 Coffea canephora HOM05D014961 ORTHO05D010667 2.4e-15 87.4 315 27.6
Prupe.6G336700 Prunus persica HOM05D014796 ORTHO05D010667 1.6e-14 84.7 159 39.6
MD12G1233400 Malus domestica HOM05D014796 ORTHO05D010667 6.0e-14 82.8 182 35.7
Rhsim10G0109900 Rhododendron simsii HOM05D014961 ORTHO05D010667 1.3e-13 81.6 401 28.9
FAN05G2376 Fragaria x ananassa HOM05D014796 ORTHO05D010667 2.8e-11 73.9 281 28.1
QL03p001016 Quercus lobata HOM05D009433 ORTHO05D010667 2.6e-09 67.4 191 31.9
PGR004G0763 Punica granatum HOM05D047824 ORTHO05D050612 4.1e-07 60.1 328 27.4
QL03p001021 Quercus lobata HOM05D009433 ORTHO05D010667 4.1e-07 60.1 73 42.5
Haze_20392 Corylus avellana HOM05D009433 ORTHO05D010667 6.0e-06 56.2 81 46.9


User provided reference genes

Program Settings