Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 1.3e-129 466.5 242 100.0
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 5.6e-93 344.7 248 72.6
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 7.3e-93 344.4 252 71.0
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 7.3e-93 344.4 247 74.1
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 1.8e-91 339.7 252 71.0
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 3.1e-91 339.0 244 70.9
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 5.2e-91 338.2 246 72.8
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 6.8e-91 337.8 255 72.9
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 1.2e-90 337.0 248 72.6
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 2.6e-90 335.9 251 69.3
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 3.4e-90 335.5 250 70.8
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 5.8e-90 334.7 250 71.2
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 1.3e-89 333.6 253 71.9
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 2.2e-89 332.8 248 70.2
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 2.9e-89 332.4 255 70.2
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 4.9e-89 331.6 248 70.2
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 8.4e-89 330.9 252 69.4
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 2.4e-88 329.3 254 69.7
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 7.1e-88 327.8 253 71.9
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 9.3e-88 327.4 254 70.1
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 2.1e-87 326.2 247 68.4
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 3.5e-87 325.5 251 70.9
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 6.0e-87 324.7 246 69.5
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 6.0e-87 324.7 252 68.3
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 7.8e-87 324.3 247 68.0
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.7e-86 323.2 245 68.2
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 1.7e-86 323.2 245 68.2
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 3.0e-86 322.4 247 67.6
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 6.6e-86 321.2 250 69.2
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 2.5e-85 319.3 253 66.4
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 2.5e-85 319.3 251 69.3
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 4.3e-85 318.5 259 65.3
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 7.3e-85 317.8 249 70.3
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 9.6e-85 317.4 245 68.2
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 9.6e-85 317.4 217 75.6
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 2.1e-84 316.2 262 63.4
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 6.2e-84 314.7 240 68.8
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 1.1e-83 313.9 249 67.1
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 1.1e-83 313.9 253 66.0
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.1e-83 313.9 268 64.9
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 1.8e-83 313.2 251 66.5
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 5.3e-83 311.6 244 66.0
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 1.2e-82 310.5 252 64.3
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 2.0e-82 309.7 254 65.7
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 1.7e-81 306.6 251 65.3
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 2.9e-81 305.8 244 65.2
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 4.9e-81 305.1 240 67.1
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 6.4e-81 304.7 245 64.5
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 6.4e-81 304.7 293 59.7
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 1.1e-80 303.9 251 64.9
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 2.4e-80 302.8 252 63.9
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 2.4e-80 302.8 237 67.1
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 4.2e-80 302.0 244 64.3
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 4.2e-80 302.0 244 65.6
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 5.4e-80 301.6 262 62.2
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 9.3e-80 300.8 245 64.5
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 1.6e-79 300.1 256 64.5
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 3.5e-79 298.9 253 61.7
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 1.7e-78 296.6 238 66.0
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 2.3e-78 296.2 239 65.3
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 5.1e-78 295.0 239 64.9
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 8.7e-78 294.3 252 64.3
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 1.5e-77 293.5 260 62.7
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 1.5e-77 293.5 243 63.0
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 7.3e-77 291.2 187 74.9
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 9.6e-77 290.8 261 63.2
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 9.6e-77 290.8 271 58.3
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 1.3e-76 290.4 242 62.4
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 2.1e-76 289.7 252 61.9
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 2.8e-76 289.3 263 62.0
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 2.8e-76 289.3 263 62.0
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 4.8e-76 288.5 183 74.9
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 8.1e-76 287.7 209 68.9
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 1.1e-75 287.3 251 61.0
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 1.8e-75 286.6 251 60.2
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 3.1e-75 285.8 249 61.8
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 4.0e-75 285.4 214 66.4
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 2.0e-74 283.1 248 62.1
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 3.4e-74 282.3 244 61.1
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 7.6e-74 281.2 244 65.2
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 7.6e-74 281.2 251 59.4
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 2.2e-73 279.6 255 57.6
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 2.2e-73 279.6 162 80.9
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 1.1e-72 277.3 244 61.9
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 1.4e-72 276.9 246 58.5
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 4.2e-72 275.4 214 65.9
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 4.2e-72 275.4 245 58.4
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 1.2e-71 273.9 256 55.9
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 7.9e-71 271.2 178 74.7
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 1.8e-70 270.0 214 62.6
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 2.3e-70 269.6 245 58.8
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 1.9e-69 266.5 200 67.5
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 6.2e-68 261.5 279 56.6
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 1.1e-67 260.8 244 58.6
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 2.0e-66 256.5 215 57.7
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 2.6e-66 256.1 259 52.1
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 3.4e-66 255.8 239 60.7
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 5.8e-66 255.0 243 57.2
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 5.5e-64 248.4 144 82.6
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 2.7e-63 246.1 144 84.0
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 1.8e-62 243.4 213 58.7
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 4.3e-61 238.8 194 60.8
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 1.9e-56 223.4 204 59.8
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.9e-49 199.5 240 51.7
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 6.5e-49 198.4 177 63.8
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 3.6e-47 192.6 134 68.7
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 9.7e-45 184.5 168 52.4
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 9.7e-45 184.5 161 56.5
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 1.4e-43 180.6 158 63.9
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 2.6e-42 176.4 166 50.0
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 2.5e-40 169.9 177 47.5
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 9.4e-40 167.9 95 83.2
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 2.1e-39 166.8 167 49.1
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 9.1e-35 151.4 146 58.9
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.6e-34 149.8 138 62.3
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 4.2e-32 142.5 158 52.5
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 1.2e-26 124.4 96 63.5
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 1.6e-23 114.0 68 76.5
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 6.5e-17 92.0 132 39.4
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 5.2e-14 82.4 186 29.0
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 2.3e-09 67.0 190 29.5
PRCOL_00002748 Prasinoderma coloniale HOM05D006710 ORTHO05D008353 1.9e-08 63.9 139 31.7
HPP92_013649 Vanilla planifolia HOM05D006710 ORTHO05D008353 6.8e-06 55.5 35 71.4


User provided reference genes

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