Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.429 Acer truncatum HOM05D006048 ORTHO05D007642 1.4e-128 463.0 235 100.0
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 1.7e-62 243.4 222 60.8
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 6.5e-54 214.9 227 54.6
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 1.0e-51 207.6 226 51.3
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 2.3e-51 206.5 226 52.7
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 7.4e-50 201.4 232 48.3
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 2.2e-49 199.9 227 49.8
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 4.5e-47 192.2 226 50.9
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 1.3e-46 190.7 225 51.1
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 1.3e-46 190.7 225 51.1
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 1.7e-46 190.3 200 52.0
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 3.8e-46 189.1 232 47.4
CiPaw.07G016800 Carya illinoinensis HOM05D006048 ORTHO05D007642 6.5e-46 188.3 212 49.5
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 1.5e-45 187.2 224 48.2
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 3.2e-45 186.0 225 50.2
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 1.1e-42 177.6 227 46.3
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 5.7e-42 175.3 224 46.0
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 1.7e-41 173.7 224 46.0
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 2.8e-41 172.9 226 46.5
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 8.2e-41 171.4 226 46.5
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 1.1e-40 171.0 211 47.9
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 3.1e-40 169.5 224 45.1
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 7.0e-40 168.3 221 48.0
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 1.6e-39 167.2 225 43.6
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 1.7e-38 163.7 226 41.6
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 6.5e-38 161.8 224 43.3
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 4.2e-37 159.1 229 41.5
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.1e-36 156.8 218 47.2
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.7e-36 156.4 218 47.2
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 3.6e-36 156.0 218 46.8
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 6.1e-36 155.2 218 46.8
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 8.0e-36 154.8 218 46.8
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 3.0e-35 152.9 281 36.7
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 4.0e-35 152.5 221 44.3
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.5e-34 150.6 218 47.7
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 2.0e-34 150.2 272 38.2
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 2.0e-34 150.2 224 42.9
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 5.7e-34 148.7 227 40.5
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 5.7e-34 148.7 221 41.2
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 5.7e-34 148.7 222 41.4
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 7.5e-34 148.3 220 45.9
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 2.2e-33 146.7 193 44.0
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 3.7e-33 146.0 188 44.1
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 1.1e-32 144.4 194 43.3
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 1.8e-32 143.7 227 38.3
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 3.1e-32 142.9 190 43.7
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 5.4e-32 142.1 221 42.1
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 7.0e-32 141.7 230 38.3
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 7.0e-32 141.7 279 36.6
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 3.5e-31 139.4 274 36.5
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 1.3e-30 137.5 223 39.5
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 1.7e-30 137.1 275 36.0
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 8.5e-30 134.8 224 36.6
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 1.5e-29 134.0 222 38.3
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 1.5e-29 134.0 197 40.6
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 1.5e-29 134.0 188 42.6
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 3.2e-29 132.9 222 38.7
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 1.2e-28 131.0 225 36.4
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 1.4e-27 127.5 225 36.0
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 1.8e-27 127.1 219 35.6
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 5.2e-27 125.6 224 39.7
Manes.08G121600 Manihot esculenta HOM05D006048 ORTHO05D007642 6.8e-27 125.2 136 50.7
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 6.8e-27 125.2 220 38.6
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 7.5e-26 121.7 163 46.0
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 7.5e-26 121.7 201 38.3
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 2.2e-25 120.2 235 33.2
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 2.8e-25 119.8 228 35.1
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 6.3e-25 118.6 200 39.5
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 8.3e-25 118.2 201 39.3
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 7.0e-24 115.2 227 36.6
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 7.0e-24 115.2 203 36.0
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 2.9e-22 109.8 257 32.3
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 3.8e-22 109.4 234 35.0
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 1.1e-21 107.8 233 32.2
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 1.5e-21 107.5 201 38.3
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 1.9e-21 107.1 138 45.7
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 1.9e-21 107.1 200 34.0
Actinidia01443 Actinidia chinensis HOM05D006048 ORTHO05D007642 1.6e-20 104.0 127 46.5
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 2.8e-20 103.2 228 32.0
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 5.2e-19 99.0 265 33.2
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 5.2e-19 99.0 232 32.8
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 8.9e-19 98.2 205 33.7
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 2.0e-18 97.1 278 31.3
Lj9A29T9 Lonicera japonica HOM05D006048 ORTHO05D007642 2.0e-18 97.1 141 44.7
Lj9A18T10 Lonicera japonica HOM05D006048 ORTHO05D007642 5.7e-18 95.5 158 41.8
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 5.7e-18 95.5 204 32.4
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 7.5e-18 95.1 267 30.0
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 1.7e-17 94.0 231 34.2
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 1.1e-16 91.3 285 30.2
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 1.4e-16 90.9 295 30.5
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 7.0e-16 88.6 275 31.3
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 9.2e-16 88.2 266 31.6
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 1.2e-15 87.8 266 32.0
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 1.2e-15 87.8 187 37.4
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 2.0e-15 87.0 264 29.9
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 1.7e-14 84.0 187 27.8
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 2.3e-14 83.6 253 28.9
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 2.3e-14 83.6 186 32.8
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 5.0e-14 82.4 186 28.0
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 5.6e-13 79.0 269 26.0
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 2.8e-12 76.6 276 30.1
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 6.8e-11 72.0 197 28.9
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 5.8e-10 68.9 97 40.2
MBI12_g31451_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 1.7e-09 67.4 99 39.4


User provided reference genes

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