Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 6.0e-91 337.4 162 100.0
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 3.3e-49 198.7 190 56.3
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 2.8e-48 195.7 190 55.8
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.8e-48 195.7 189 56.1
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 2.8e-48 195.7 189 56.1
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 3.7e-48 195.3 189 55.6
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 3.7e-48 195.3 190 55.8
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 6.3e-48 194.5 190 56.3
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 6.3e-48 194.5 190 55.8
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 8.2e-48 194.1 189 55.6
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 8.2e-48 194.1 190 55.8
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.1e-47 193.7 189 55.6
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 1.4e-47 193.4 196 53.6
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 2.4e-47 192.6 192 53.6
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 2.4e-47 192.6 189 55.6
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 2.4e-47 192.6 189 56.1
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 2.4e-47 192.6 189 55.0
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 3.1e-47 192.2 190 55.8
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 5.3e-47 191.4 189 53.4
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 5.3e-47 191.4 190 55.3
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 6.9e-47 191.0 190 52.6
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 9.0e-47 190.7 190 55.3
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 9.0e-47 190.7 190 53.2
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 9.0e-47 190.7 190 54.7
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 1.2e-46 190.3 189 54.0
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 1.2e-46 190.3 189 54.0
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 1.2e-46 190.3 190 54.7
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 1.2e-46 190.3 190 54.7
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 1.2e-46 190.3 189 55.6
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.2e-46 190.3 190 54.2
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 1.5e-46 189.9 190 53.7
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 1.5e-46 189.9 190 53.7
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 1.5e-46 189.9 189 54.5
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 2.0e-46 189.5 190 54.2
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 2.6e-46 189.1 189 55.0
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 3.4e-46 188.7 189 55.0
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 4.5e-46 188.3 190 53.7
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 4.5e-46 188.3 190 54.2
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 4.5e-46 188.3 190 53.7
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 4.5e-46 188.3 190 54.2
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 5.9e-46 188.0 190 53.7
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 5.9e-46 188.0 190 54.7
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 5.9e-46 188.0 189 54.5
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 7.7e-46 187.6 190 54.2
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 7.7e-46 187.6 190 53.7
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 7.7e-46 187.6 189 55.0
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 1.0e-45 187.2 189 53.4
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 1.0e-45 187.2 190 53.7
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 1.0e-45 187.2 189 54.5
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 1.3e-45 186.8 189 54.5
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 1.3e-45 186.8 190 53.2
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 1.3e-45 186.8 190 53.7
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 1.3e-45 186.8 189 54.0
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 1.3e-45 186.8 190 53.2
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 1.7e-45 186.4 189 54.0
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 1.7e-45 186.4 189 54.0
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 1.7e-45 186.4 190 53.2
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 1.7e-45 186.4 190 54.2
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 2.2e-45 186.0 189 54.0
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 2.2e-45 186.0 190 52.6
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 2.2e-45 186.0 190 52.1
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 2.9e-45 185.7 190 53.7
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 2.9e-45 185.7 189 54.0
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 3.8e-45 185.3 190 51.6
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 3.8e-45 185.3 190 53.7
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 5.0e-45 184.9 190 53.2
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 6.5e-45 184.5 188 52.1
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 6.5e-45 184.5 201 51.7
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 8.5e-45 184.1 190 52.6
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 1.1e-44 183.7 190 53.2
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 1.1e-44 183.7 189 53.4
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 1.1e-44 183.7 190 51.6
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 1.1e-44 183.7 189 54.0
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 1.1e-44 183.7 189 54.0
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 1.4e-44 183.3 188 53.7
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 2.5e-44 182.6 190 53.2
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 7.2e-44 181.0 190 52.1
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 9.4e-44 180.6 190 52.1
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 9.4e-44 180.6 195 52.8
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 9.4e-44 180.6 198 52.0
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 1.2e-43 180.3 189 52.9
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 1.6e-43 179.9 190 53.2
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 2.1e-43 179.5 190 51.6
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 2.1e-43 179.5 190 51.6
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 2.7e-43 179.1 189 52.9
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 4.6e-43 178.3 190 52.1
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 4.6e-43 178.3 195 50.8
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 7.9e-43 177.6 190 51.6
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 1.4e-42 176.8 190 51.6
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 2.3e-42 176.0 190 51.6
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 5.1e-42 174.9 189 52.4
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 6.7e-42 174.5 189 49.7
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 8.8e-42 174.1 189 52.9
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 8.8e-42 174.1 195 50.3
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 2.0e-41 172.9 219 46.1
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 3.3e-41 172.2 190 51.6
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 3.3e-41 172.2 188 51.6
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 4.3e-41 171.8 189 49.2
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 4.3e-41 171.8 190 50.5
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 4.3e-41 171.8 193 50.3
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 5.7e-41 171.4 189 49.2
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 5.7e-41 171.4 189 49.2
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 9.7e-41 170.6 191 50.8
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 9.7e-41 170.6 188 49.5
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 2.8e-40 169.1 220 45.9
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 6.3e-40 167.9 216 46.3
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 1.1e-39 167.2 197 50.3
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 1.4e-39 166.8 190 50.5
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 5.3e-39 164.9 190 50.0
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 1.1e-33 147.1 168 51.8
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 4.5e-30 135.2 192 40.1
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 1.3e-29 133.7 191 42.9
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 6.5e-29 131.3 196 39.3
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 1.9e-28 129.8 196 38.3
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 9.4e-28 127.5 192 38.0
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 2.7e-27 125.9 168 45.2
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 1.4e-26 123.6 193 39.4
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 2.3e-26 122.9 169 42.0
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 3.3e-25 119.0 191 40.3
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 1.2e-22 110.5 189 39.2
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 1.7e-21 106.7 84 64.3
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 8.5e-21 104.4 84 63.1
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 3.2e-20 102.4 61 75.4
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 1.2e-19 100.5 162 40.7
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 4.7e-19 98.6 106 51.9
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 6.1e-19 98.2 84 58.3
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 6.1e-19 98.2 84 58.3
Actinidia31013 Actinidia chinensis HOM05D005603 ORTHO05D006944 8.0e-19 97.8 60 75.0
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 4.0e-18 95.5 56 78.6
RcHm_v2.0_Chr7g0231521 Rosa chinensis HOM05D005603 ORTHO05D006944 3.7e-08 62.4 39 74.4


User provided reference genes

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