Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.3657 Acer truncatum HOM05D000913 ORTHO05D000687 1.3e-35 152.5 75 100.0
Dinv03822 Davidia involucrata HOM05D000913 ORTHO05D000687 4.5e-09 64.3 46 71.7
CiPaw.11G201200 Carya illinoinensis HOM05D000913 ORTHO05D000687 5.9e-09 63.9 45 64.4
GSVIVG01014802001 Vitis vinifera HOM05D000913 ORTHO05D000687 5.9e-09 63.9 61 60.7
Nn1g07601 Nelumbo nucifera HOM05D000913 ORTHO05D000687 1.0e-08 63.2 46 67.4
GSVIVG01014795001 Vitis vinifera HOM05D000913 ORTHO05D000687 1.3e-08 62.8 61 60.7
Dinv03824 Davidia involucrata HOM05D000913 ORTHO05D000687 1.7e-08 62.4 46 69.6
Dinv10316 Davidia involucrata HOM05D000913 ORTHO05D000687 2.2e-08 62.0 46 71.7
Prupe.4G234800 Prunus persica HOM05D000913 ORTHO05D000687 2.2e-08 62.0 46 60.9
Haze_09888 Corylus avellana HOM05D000913 ORTHO05D000687 6.5e-08 60.5 46 65.2
TAR627G0478 Trochodendron aralioides HOM05D002322 ORTHO05D002536 6.5e-08 60.5 44 61.4
GSVIVG01014798001 Vitis vinifera HOM05D000913 ORTHO05D000687 6.5e-08 60.5 61 57.4
Hma1.2p1_0193F.1_g084060 Hydrangea macrophylla HOM05D000913 ORTHO05D000687 8.5e-08 60.1 44 70.5
Prupe.2G123900 Prunus persica HOM05D000913 ORTHO05D000687 8.5e-08 60.1 46 56.5
DCAR_016629 Daucus carota HOM05D000913 ORTHO05D000687 1.5e-07 59.3 43 69.8
Atru.chr6.3444 Acer truncatum HOM05D000913 ORTHO05D000687 1.9e-07 58.9 46 58.7
Thecc.07G006200 Theobroma cacao HOM05D000913 ORTHO05D000687 2.5e-07 58.5 44 70.5
DCAR_008754 Daucus carota HOM05D000913 ORTHO05D000687 3.2e-07 58.2 46 56.5
Dinv16085 Davidia involucrata HOM05D000913 ORTHO05D000687 3.2e-07 58.2 46 63.0
QL08p001958 Quercus lobata HOM05D000913 ORTHO05D000687 3.2e-07 58.2 46 67.4
MBI12_g45219_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 4.2e-07 57.8 46 60.9
MBI12_g26217_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 5.5e-07 57.4 46 58.7
TAR629G0096 Trochodendron aralioides HOM05D000913 ORTHO05D000687 5.5e-07 57.4 46 60.9
Cpa.g.sc12.95 Carica papaya HOM05D000913 ORTHO05D000687 7.2e-07 57.0 46 63.0
QL05p066526 Quercus lobata HOM05D000913 ORTHO05D000687 7.2e-07 57.0 44 61.4
QL08p002232 Quercus lobata HOM05D000913 ORTHO05D000687 7.2e-07 57.0 62 58.1
MBI14_g42478_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 9.4e-07 56.6 45 60.0
QL08p001984 Quercus lobata HOM05D000913 ORTHO05D000687 9.4e-07 56.6 46 65.2
QL08p002253 Quercus lobata HOM05D000913 ORTHO05D000687 9.4e-07 56.6 62 56.5
Thecc.07G019800 Theobroma cacao HOM05D000913 ORTHO05D000687 9.4e-07 56.6 45 62.2
COL.COLO4_09796 Corchorus olitorius HOM05D000913 ORTHO05D000687 1.2e-06 56.2 46 58.7
Haze_09886 Corylus avellana HOM05D001067 ORTHO05D000876 1.2e-06 56.2 46 63.0
FvH4_3g24100 Fragaria vesca HOM05D000913 ORTHO05D000687 1.2e-06 56.2 46 58.7
FAN11G2899 Fragaria x ananassa HOM05D009841 ORTHO05D012869 1.2e-06 56.2 46 58.7
FAN25G1205 Fragaria x ananassa HOM05D000913 ORTHO05D000687 1.2e-06 56.2 46 58.7
FAN25G3293 Fragaria x ananassa HOM05D000913 ORTHO05D000687 1.2e-06 56.2 46 58.7
MBI14_g17952_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 1.2e-06 56.2 46 56.5
QL08p005455 Quercus lobata HOM05D000913 ORTHO05D000687 1.2e-06 56.2 46 60.9
Haze_09880 Corylus avellana HOM05D000913 ORTHO05D000687 1.6e-06 55.8 46 60.9
Manes.03G137300 Manihot esculenta HOM05D000913 ORTHO05D000687 1.6e-06 55.8 44 65.9
Manes.11G055424 Manihot esculenta HOM05D000913 ORTHO05D000687 1.6e-06 55.8 44 65.9
Manes.11G060024 Manihot esculenta HOM05D000913 ORTHO05D000687 1.6e-06 55.8 44 65.9
Manes.11G060239 Manihot esculenta HOM05D000913 ORTHO05D000687 1.6e-06 55.8 44 65.9
QL08p002030 Quercus lobata HOM05D000913 ORTHO05D000687 1.6e-06 55.8 46 65.2
QL08p002331 Quercus lobata HOM05D000913 ORTHO05D000687 1.6e-06 55.8 46 67.4
Ah.12g065180 Amaranthus hybridus HOM05D000913 ORTHO05D000687 2.1e-06 55.5 45 60.0
arahy.Tifrunner.gnm1.ann1.IGM1GX Arachis hypogaea HOM05D000913 ORTHO05D000687 2.1e-06 55.5 45 55.6
MD11G1204400 Malus domestica HOM05D000913 ORTHO05D000687 2.1e-06 55.5 42 61.9
Thecc.07G019700 Theobroma cacao HOM05D000913 ORTHO05D000687 2.1e-06 55.5 46 56.5
TAR629G2544 Trochodendron aralioides HOM05D000913 ORTHO05D000687 2.1e-06 55.5 46 60.9
Glyma.09G016400 Glycine max HOM05D000913 ORTHO05D000687 2.7e-06 55.1 44 59.1
Gohir.D05G386200 Gossypium hirsutum HOM05D000913 ORTHO05D000687 2.7e-06 55.1 45 55.6
MBI15_g37255_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 2.7e-06 55.1 46 56.5
MBI14_g44232_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 3.6e-06 54.7 45 57.8
QL05p066534 Quercus lobata HOM05D000913 ORTHO05D000687 3.6e-06 54.7 44 59.1
QL08p002202 Quercus lobata HOM05D000913 ORTHO05D000687 3.6e-06 54.7 44 61.4
Sopen12g007560 Solanum pennellii HOM05D000913 ORTHO05D000687 3.6e-06 54.7 44 63.6
PGSC0003DMG401029798 Solanum tuberosum HOM05D000913 ORTHO05D000687 3.6e-06 54.7 44 63.6
CiPaw.11G208300 Carya illinoinensis HOM05D000913 ORTHO05D000687 4.7e-06 54.3 44 61.4
Prupe.4G234700 Prunus persica HOM05D000913 ORTHO05D000687 4.7e-06 54.3 45 62.2
Sabra16G0317700 Salix brachista HOM05D000913 ORTHO05D000687 4.7e-06 54.3 46 56.5
Thecc.09G251800 Theobroma cacao HOM05D000913 ORTHO05D000687 4.7e-06 54.3 43 58.1
arahy.Tifrunner.gnm1.ann1.RGK4QC Arachis hypogaea HOM05D000913 ORTHO05D000687 6.1e-06 53.9 45 55.6
CSS0028038 Camellia sinensis var. sinensis HOM05D000913 ORTHO05D000687 6.1e-06 53.9 44 56.8
Gohir.D05G378500 Gossypium hirsutum HOM05D000913 ORTHO05D000687 6.1e-06 53.9 45 57.8
Gorai.009G446400 Gossypium raimondii HOM05D000913 ORTHO05D000687 6.1e-06 53.9 45 57.8
Medtr0635s0010 Medicago truncatula HOM05D000913 ORTHO05D000687 6.1e-06 53.9 43 58.1
Medtr2g027600 Medicago truncatula HOM05D000913 ORTHO05D000687 6.1e-06 53.9 43 58.1
QL08p002290 Quercus lobata HOM05D000913 ORTHO05D000687 6.1e-06 53.9 62 56.5
Duzib268G1294 Durio zibethinus HOM05D000913 ORTHO05D000687 8.0e-06 53.5 46 56.5
MBI14_g17948_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 8.0e-06 53.5 46 54.3
Nitab4.5_0002517g0020 Nicotiana tabacum HOM05D000913 ORTHO05D000687 8.0e-06 53.5 44 59.1
Prupe.6G030200 Prunus persica HOM05D000913 ORTHO05D000687 8.0e-06 53.5 58 56.9
QL05p066539 Quercus lobata HOM05D000913 ORTHO05D000687 8.0e-06 53.5 44 56.8


User provided reference genes

Program Settings