Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.3400 Acer truncatum HOM05D003074 ORTHO05D002434 2.7e-71 271.9 144 100.0
Atru.chr2.3399 Acer truncatum HOM05D003074 ORTHO05D002434 6.8e-46 187.6 145 75.2
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 3.9e-25 118.6 148 50.7
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 1.1e-24 117.1 151 49.0
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.1e-24 117.1 147 53.1
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 1.5e-24 116.7 150 48.0
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 5.6e-24 114.8 149 49.7
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 8.1e-23 110.9 152 50.7
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 1.1e-22 110.5 146 50.0
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 1.4e-22 110.2 150 51.3
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 1.4e-22 110.2 148 46.6
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 1.8e-22 109.8 142 50.7
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.8e-22 109.8 145 50.3
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 1.8e-22 109.8 145 50.3
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 3.1e-22 109.0 151 49.0
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 6.9e-22 107.8 145 49.7
CiPaw.11G189000 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.5e-21 106.7 152 48.0
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 1.5e-21 106.7 149 48.3
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.5e-21 106.7 144 50.7
Dinv22264 Davidia involucrata HOM05D003074 ORTHO05D002434 2.0e-21 106.3 132 56.8
FAN16G0504 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.7e-20 103.2 157 46.5
FAN25G2410 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.7e-20 103.2 157 46.5
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 2.9e-20 102.4 143 44.8
FvH4_3g22640 Fragaria vesca HOM05D003074 ORTHO05D002434 4.9e-20 101.7 157 45.9
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 4.9e-20 101.7 141 45.4
FAN11G2929 Fragaria x ananassa HOM05D003074 ORTHO05D002434 8.4e-20 100.9 157 45.9
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 1.4e-19 100.1 144 45.8
FAN21G2959 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.9e-19 99.8 158 45.6
Gohir.A01G079300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.7e-18 95.9 141 43.3
Hma1.2p1_1091F.1_g255850 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 3.5e-18 95.5 128 47.7
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 3.5e-18 95.5 144 48.6
MD11G1218800 Malus domestica HOM05D003074 ORTHO05D002434 4.6e-18 95.1 131 45.0
PGSC0003DMG400001089 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.3e-17 93.6 143 42.7
Hma1.2p1_1162F.1_g262580 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.7e-17 93.2 128 47.7
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 2.3e-17 92.8 151 43.7
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 3.9e-17 92.0 128 44.5
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 6.6e-17 91.3 149 40.3
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 8.7e-17 90.9 147 44.2
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 3.3e-16 89.0 146 42.5
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 4.3e-16 88.6 142 45.1
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 4.3e-16 88.6 144 43.1
Gohir.D01G066350 Gossypium hirsutum HOM05D003074 ORTHO05D002434 7.3e-16 87.8 122 45.1
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 9.6e-16 87.4 148 43.9
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 9.6e-16 87.4 148 43.9
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 1.6e-15 86.7 142 40.1
Actinidia35342 Actinidia chinensis HOM05D003074 ORTHO05D002434 2.1e-15 86.3 128 41.4
Eucgr.F03465 Eucalyptus grandis HOM05D003074 ORTHO05D002434 2.1e-15 86.3 147 40.1
RcHm_v2.0_Chr5g0039411 Rosa chinensis HOM05D003074 ORTHO05D002434 2.8e-15 85.9 150 41.3
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 4.8e-15 85.1 141 41.8
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 6.2e-15 84.7 145 40.7
Oeu007582.1 Olea europaea HOM05D003074 ORTHO05D002434 1.1e-14 84.0 141 41.8
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 3.1e-14 82.4 141 41.8
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 3.1e-14 82.4 153 43.8
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 5.3e-14 81.6 144 37.5
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 5.3e-14 81.6 141 39.0
Lsat_1_v5_gn_9_93960 Lactuca sativa HOM05D003074 ORTHO05D002434 5.3e-14 81.6 71 60.6
TAR624G0488 Trochodendron aralioides HOM05D003074 ORTHO05D002434 5.3e-14 81.6 124 47.6
Medtr3g051510 Medicago truncatula HOM05D003074 ORTHO05D002434 2.0e-13 79.7 56 71.4
Medtr3g051530 Medicago truncatula HOM05D003074 ORTHO05D002434 2.0e-13 79.7 56 71.4
Aqoxy1G02178 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 3.4e-13 79.0 145 40.7
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 3.4e-13 79.0 156 38.5
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 3.4e-13 79.0 147 37.4
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 4.5e-13 78.6 141 37.6
Ca_01715_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 4.5e-13 78.6 56 71.4
Ca_30684_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 4.5e-13 78.6 56 71.4
Cc09_g09730 Coffea canephora HOM05D003074 ORTHO05D002434 5.8e-13 78.2 155 40.6
Medtr3g051570 Medicago truncatula HOM05D003074 ORTHO05D002434 5.8e-13 78.2 56 69.6
Medtr3g051610 Medicago truncatula HOM05D003074 ORTHO05D002434 5.8e-13 78.2 85 54.1
Sabra11G0125300 Salix brachista HOM05D003074 ORTHO05D002434 5.8e-13 78.2 72 72.2
PGSC0003DMG400032292 Solanum tuberosum HOM05D003074 ORTHO05D002434 5.8e-13 78.2 56 71.4
PGSC0003DMG400029820 Solanum tuberosum HOM05D003074 ORTHO05D002434 9.9e-13 77.4 56 69.6
TPR.G16595 Trifolium pratense HOM05D003074 ORTHO05D002434 9.9e-13 77.4 86 51.2
Lsat_1_v5_gn_5_6000 Lactuca sativa HOM05D003074 ORTHO05D002434 1.3e-12 77.0 145 38.6
PGSC0003DMG400031876 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.3e-12 77.0 56 71.4
ECA240G4169 Erigeron canadensis HOM05D003074 ORTHO05D002434 1.7e-12 76.6 53 71.7
Peaxi162Scf01097g00039 Petunia axillaris HOM05D003074 ORTHO05D002434 1.7e-12 76.6 142 38.7
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 4.9e-12 75.1 57 64.9
Sabra11G0125400 Salix brachista HOM05D003074 ORTHO05D002434 6.4e-12 74.7 56 71.4
ClCG05G014310 Citrullus lanatus HOM05D003074 ORTHO05D002434 8.4e-12 74.3 57 64.9
Glyma.08G316000 Glycine max HOM05D003074 ORTHO05D002434 1.9e-11 73.2 79 51.9
Potri.011G139400 Populus trichocarpa HOM05D003074 ORTHO05D002434 1.9e-11 73.2 76 67.1
unitig_85.g27325 Utricularia gibba HOM05D003074 ORTHO05D002434 1.9e-11 73.2 141 34.8
Glyma.15G107300 Glycine max HOM05D008677 ORTHO05D002434 2.4e-11 72.8 152 39.5
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 2.4e-11 72.8 149 38.9
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 2.4e-11 72.8 144 37.5
TPR.G34803 Trifolium pratense HOM05D003074 ORTHO05D002434 2.4e-11 72.8 53 67.9
TAR627G0593 Trochodendron aralioides HOM05D003074 ORTHO05D002434 2.4e-11 72.8 54 68.5
Lalb_Chr15g0081141 Lupinus albus HOM05D003074 ORTHO05D002434 3.2e-11 72.4 56 64.3
MBI18_g22612_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 5.4e-11 71.6 142 37.3
Dinv13888 Davidia involucrata HOM05D003074 ORTHO05D002434 1.6e-10 70.1 54 66.7
Glyma.18G096700 Glycine max HOM05D003074 ORTHO05D002434 1.6e-10 70.1 57 64.9
CDE05G1751 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 2.1e-10 69.7 144 31.2
Cc09_g01730 Coffea canephora HOM05D003074 ORTHO05D002434 2.1e-10 69.7 149 36.9
ECA246G0494 Erigeron canadensis HOM05D003074 ORTHO05D002434 2.7e-10 69.3 142 38.7
Atru.chr10.2213 Acer truncatum HOM05D003074 ORTHO05D002434 3.5e-10 68.9 64 57.8
PGR004G0474 Punica granatum HOM05D003074 ORTHO05D002434 3.5e-10 68.9 146 40.4
Phvul.006G043100 Phaseolus vulgaris HOM05D003074 ORTHO05D002434 4.6e-10 68.6 82 47.6
Phvul.006G150100 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 6.0e-10 68.2 147 38.1
MBI02_g07158_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 1.0e-09 67.4 56 60.7
Rhsim13G0146000 Rhododendron simsii HOM05D002761 ORTHO05D003351 1.0e-09 67.4 78 48.7
RhsimUnG0109700 Rhododendron simsii HOM05D003074 ORTHO05D002434 1.0e-09 67.4 78 48.7
Lj6g0015217 Lotus japonicus HOM05D003074 ORTHO05D002434 1.3e-09 67.0 145 36.6
LjContig00272g0022666 Lotus japonicus HOM05D003074 ORTHO05D002434 1.3e-09 67.0 54 61.1
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 1.3e-09 67.0 142 33.8
EL10Ac4g07811 Beta vulgaris HOM05D003074 ORTHO05D002434 2.3e-09 66.2 143 35.7
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 2.3e-09 66.2 146 35.6
Sabra04G0008200 Salix brachista HOM05D003074 ORTHO05D002434 2.3e-09 66.2 147 34.0
TWI38G1232 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 2.3e-09 66.2 154 39.0
CDE05G3459 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 3.0e-09 65.9 144 32.6
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 3.9e-09 65.5 146 35.6
Sabra16G0289700 Salix brachista HOM05D003074 ORTHO05D002434 3.9e-09 65.5 145 37.2
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 3.9e-09 65.5 55 60.0
AUR62012700 Chenopodium quinoa HOM05D003074 ORTHO05D002434 5.1e-09 65.1 152 37.5
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 5.1e-09 65.1 145 33.8
Lalb_Chr04g0248431 Lupinus albus HOM05D003074 ORTHO05D002434 5.1e-09 65.1 58 58.6
Nitab4.5_0009995g0010 Nicotiana tabacum HOM05D003074 ORTHO05D002434 5.1e-09 65.1 61 54.1
Nitab4.5_0009995g0020 Nicotiana tabacum HOM05D003074 ORTHO05D002434 5.1e-09 65.1 119 36.1
Ca_00651_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 6.7e-09 64.7 155 36.8
MELO3C025367.2 Cucumis melo HOM05D003074 ORTHO05D002434 8.7e-09 64.3 57 54.4
AUR62015772 Chenopodium quinoa HOM05D003074 ORTHO05D002434 1.1e-08 63.9 150 34.0
Phvul.008G267000 Phaseolus vulgaris HOM05D003074 ORTHO05D002434 1.1e-08 63.9 53 62.3
Psat1g181240 Pisum sativum HOM05D008677 ORTHO05D002434 1.1e-08 63.9 159 36.5
Rhsim06G0216700 Rhododendron simsii HOM05D003074 ORTHO05D002434 1.1e-08 63.9 128 39.8
Migut.H01829 Erythranthe guttata HOM05D003074 ORTHO05D002434 1.9e-08 63.2 150 37.3
Medtr2g023010 Medicago truncatula HOM05D008677 ORTHO05D002434 1.9e-08 63.2 152 35.5
Aqoxy1G02175 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 2.5e-08 62.8 146 37.0
CiPaw.10G070500 Carya illinoinensis HOM05D003074 ORTHO05D002434 2.5e-08 62.8 161 36.6
Aqoxy1G02176 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 3.3e-08 62.4 144 36.8
CDE02G3016 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 3.3e-08 62.4 58 55.2
AUR62020442 Chenopodium quinoa HOM05D003074 ORTHO05D002434 3.3e-08 62.4 150 33.3
Eucgr.D01318 Eucalyptus grandis HOM05D003074 ORTHO05D002434 3.3e-08 62.4 150 33.3
Lalb_Chr15g0087561 Lupinus albus HOM05D008677 ORTHO05D002434 4.3e-08 62.0 150 35.3
Sc03g0008600 Simmondsia chinensis HOM05D003074 ORTHO05D002434 4.3e-08 62.0 145 30.3
Manes.17G038600 Manihot esculenta HOM05D003074 ORTHO05D002434 5.6e-08 61.6 154 33.8
Nitab4.5_0000653g0010 Nicotiana tabacum HOM05D003074 ORTHO05D002434 5.6e-08 61.6 119 36.1
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 5.6e-08 61.6 145 31.7
CANSAT56G1803 Cannabis sativa HOM05D003074 ORTHO05D002434 7.4e-08 61.2 168 36.9
DCAR_004216 Daucus carota HOM05D003074 ORTHO05D002434 7.4e-08 61.2 68 51.5
Glyma.02G290900 Glycine max HOM05D003074 ORTHO05D002434 7.4e-08 61.2 53 62.3
Potri.004G015900 Populus trichocarpa HOM05D003074 ORTHO05D002434 7.4e-08 61.2 59 50.8
ATR0752G060 Amborella trichopoda HOM05D003074 ORTHO05D002434 1.3e-07 60.5 141 34.0
ClCG03G004770 Citrullus lanatus HOM05D003074 ORTHO05D002434 1.3e-07 60.5 144 33.3
TPR.G9935 Trifolium pratense HOM05D008677 ORTHO05D002434 1.3e-07 60.5 152 34.9
MELO3C002460.2 Cucumis melo HOM05D003074 ORTHO05D002434 1.6e-07 60.1 146 34.2
Potri.001G435400 Populus trichocarpa HOM05D003074 ORTHO05D002434 1.6e-07 60.1 97 57.7
CARHR095990 Cardamine hirsuta HOM05D003074 ORTHO05D002434 2.1e-07 59.7 147 30.6
MBI02_g40709_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 2.1e-07 59.7 144 34.0
Sed0005061 Sechium edule HOM05D003074 ORTHO05D002434 2.8e-07 59.3 58 50.0
Ah.04g165880 Amaranthus hybridus HOM05D003074 ORTHO05D002434 3.7e-07 58.9 56 55.4
DCAR_008152 Daucus carota HOM05D003074 ORTHO05D002434 3.7e-07 58.9 71 47.9
THA.LOC104812967 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 3.7e-07 58.9 144 33.3
Medtr5g092710 Medicago truncatula HOM05D003074 ORTHO05D002434 4.8e-07 58.5 80 38.8
Solyc12g005000.1 Solanum lycopersicum HOM05D003074 ORTHO05D002434 4.8e-07 58.5 142 33.8
AUR62020443 Chenopodium quinoa HOM05D003074 ORTHO05D002434 6.2e-07 58.2 72 45.8
Lalb_Chr07g0177261 Lupinus albus HOM05D008677 ORTHO05D002434 6.2e-07 58.2 162 32.7
ClCG10G005340 Citrullus lanatus HOM05D003074 ORTHO05D002434 8.1e-07 57.8 54 48.1
Lj4g0005888 Lotus japonicus HOM05D008677 ORTHO05D002434 8.1e-07 57.8 168 31.0
Potri.011G003100 Populus trichocarpa HOM05D003074 ORTHO05D002434 8.1e-07 57.8 151 33.8
MSTRG.12971 Avicennia marina HOM05D003074 ORTHO05D002434 1.1e-06 57.4 53 56.6
CsaV3_1G010810 Cucumis sativus L. HOM05D003074 ORTHO05D002434 1.1e-06 57.4 136 31.6
VMungo0540G1774 Vigna mungo HOM05D008677 ORTHO05D002434 1.1e-06 57.4 157 33.8
AUR62015773 Chenopodium quinoa HOM05D003074 ORTHO05D002434 1.4e-06 57.0 72 44.4
Cc05_g13710 Coffea canephora HOM05D003074 ORTHO05D002434 1.4e-06 57.0 155 34.8
RcHm_v2.0_Chr5g0003291 Rosa chinensis HOM05D003074 ORTHO05D002434 1.8e-06 56.6 61 52.5
AUR62015774 Chenopodium quinoa HOM05D003074 ORTHO05D002434 2.4e-06 56.2 143 32.2
Gohir.D10G012900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.4e-06 56.2 147 32.7
Gorai.011G014600 Gossypium raimondii HOM05D003074 ORTHO05D002434 2.4e-06 56.2 147 32.7
AUR62020444 Chenopodium quinoa HOM05D003074 ORTHO05D002434 3.1e-06 55.8 143 33.6
AUR62021958 Chenopodium quinoa HOM05D003074 ORTHO05D002434 3.1e-06 55.8 151 33.1
Duzib192G0001 Durio zibethinus HOM05D003074 ORTHO05D002434 3.1e-06 55.8 146 31.5
Gohir.A10G013000 Gossypium hirsutum HOM05D003074 ORTHO05D002434 3.1e-06 55.8 147 32.7
arahy.Tifrunner.gnm1.ann1.8P9XRD Arachis hypogaea HOM05D008677 ORTHO05D002434 4.0e-06 55.5 153 34.0
Duzib160G0150 Durio zibethinus HOM05D003074 ORTHO05D002434 5.3e-06 55.1 144 30.6
Eucgr.E04061 Eucalyptus grandis HOM05D003074 ORTHO05D002434 5.3e-06 55.1 149 35.6
Sopen12g001010 Solanum pennellii HOM05D003074 ORTHO05D002434 5.3e-06 55.1 126 34.1
PGSC0003DMG400019879 Solanum tuberosum HOM05D003074 ORTHO05D002434 5.3e-06 55.1 68 44.1
MELO3C025368.2 Cucumis melo HOM05D003074 ORTHO05D002434 6.9e-06 54.7 60 48.3
PGR042G1468 Punica granatum HOM05D003074 ORTHO05D002434 6.9e-06 54.7 148 39.2
Oeu063916.1 Olea europaea HOM05D003074 ORTHO05D002434 9.0e-06 54.3 59 49.2


User provided reference genes

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