Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.336 Acer truncatum HOM05D011415 ORTHO05D010200 1.9e-113 412.5 209 100.0
QL03p015351 Quercus lobata HOM05D008582 ORTHO05D010200 6.2e-24 115.2 220 35.9
QL03p015386 Quercus lobata HOM05D008582 ORTHO05D010200 6.2e-24 115.2 221 37.1
Ciclev10003144m.g Citrus clementina HOM05D008582 ORTHO05D010200 1.4e-23 114.0 187 42.2
CiPaw.07G030600 Carya illinoinensis HOM05D008582 ORTHO05D010200 7.6e-22 108.2 192 38.5
QL03p015301 Quercus lobata HOM05D008582 ORTHO05D010200 7.1e-20 101.7 229 32.8
QL03p015220 Quercus lobata HOM05D008582 ORTHO05D010200 1.2e-19 100.9 199 33.7
Cfa006725 Carpinus fangiana HOM05D008582 ORTHO05D010200 1.6e-19 100.5 193 38.9
QL03p015096 Quercus lobata HOM05D008582 ORTHO05D010200 1.6e-19 100.5 171 38.6
QL03p015213 Quercus lobata HOM05D008582 ORTHO05D010200 2.1e-19 100.1 171 39.2
QL03p015030 Quercus lobata HOM05D008582 ORTHO05D010200 4.6e-19 99.0 186 33.9
QL03p014248 Quercus lobata HOM05D008582 ORTHO05D010200 6.7e-18 95.1 189 36.5
QL03p014613 Quercus lobata HOM05D008582 ORTHO05D010200 1.9e-17 93.6 187 32.6
COL.COLO4_12929 Corchorus olitorius HOM05D008582 ORTHO05D010200 3.3e-17 92.8 191 34.6
FAN14G3048 Fragaria x ananassa HOM05D008582 ORTHO05D010200 5.3e-15 85.5 190 36.3
FvH4_6g07633 Fragaria vesca HOM05D008582 ORTHO05D010200 1.2e-14 84.3 202 34.2
COL.COLO4_12937 Corchorus olitorius HOM05D008582 ORTHO05D010200 4.5e-14 82.4 191 33.5
FAN14G0417 Fragaria x ananassa HOM05D008582 ORTHO05D010200 4.5e-14 82.4 202 34.2
FAN14G5961 Fragaria x ananassa HOM05D008582 ORTHO05D010200 4.5e-14 82.4 208 35.6
Haze_04035 Corylus avellana HOM05D008582 ORTHO05D010200 5.8e-14 82.0 133 43.6
FvH4_6g07631 Fragaria vesca HOM05D008582 ORTHO05D010200 1.7e-13 80.5 210 35.7
Actinidia01501 Actinidia chinensis HOM05D008582 ORTHO05D010200 2.9e-13 79.7 193 32.6
CANSAT54G1821 Cannabis sativa HOM05D008582 ORTHO05D010200 3.2e-12 76.3 189 34.9
QL03p015309 Quercus lobata HOM05D008582 ORTHO05D010200 3.2e-12 76.3 151 34.4
Nn8g39916 Nelumbo nucifera HOM05D000886 ORTHO05D000525 5.5e-12 75.5 192 32.3
PGSC0003DMG400019127 Solanum tuberosum HOM05D011415 ORTHO05D010200 5.5e-12 75.5 193 30.6
FAN05G2556 Fragaria x ananassa HOM05D008582 ORTHO05D010200 1.2e-11 74.3 201 33.3
Lj5C326T9 Lonicera japonica HOM05D008582 ORTHO05D010200 2.1e-11 73.6 142 39.4
FvH4_6g07632 Fragaria vesca HOM05D009201 ORTHO05D005238 2.7e-11 73.2 192 32.3
Peaxi162Scf00429g00052 Petunia axillaris HOM05D011415 ORTHO05D010200 1.3e-10 70.9 200 32.5
Peaxi162Scf00469g00633 Petunia axillaris HOM05D011415 ORTHO05D010200 1.8e-10 70.5 194 31.4
CAN.G756.12 Capsicum annuum HOM05D011415 ORTHO05D010200 2.3e-10 70.1 199 29.1
Lj5C326G5 Lonicera japonica HOM05D008582 ORTHO05D010200 2.3e-10 70.1 141 40.4
Lj5C326G8 Lonicera japonica HOM05D008582 ORTHO05D010200 2.3e-10 70.1 140 38.6
Solyc01g088540.1 Solanum lycopersicum HOM05D011415 ORTHO05D010200 2.3e-10 70.1 199 29.1
Sopen01g035400 Solanum pennellii HOM05D011415 ORTHO05D010200 3.0e-10 69.7 199 29.1
Sopen10g028450 Solanum pennellii HOM05D011415 ORTHO05D010200 3.0e-10 69.7 193 28.0
PGSC0003DMG400039513 Solanum tuberosum HOM05D011415 ORTHO05D010200 3.0e-10 69.7 199 29.1
FvH4_5g11671 Fragaria vesca HOM05D008582 ORTHO05D010200 8.7e-10 68.2 163 36.8
Peaxi162Scf00170g00088 Petunia axillaris HOM05D011415 ORTHO05D010200 1.5e-09 67.4 173 33.5
FAN02G2559 Fragaria x ananassa HOM05D008582 ORTHO05D010200 1.9e-09 67.0 173 32.4
QL03p015391 Quercus lobata HOM05D008582 ORTHO05D010200 1.9e-09 67.0 135 34.8
QL03p015279 Quercus lobata HOM05D008582 ORTHO05D010200 3.3e-09 66.2 142 33.1
PGSC0003DMG400019128 Solanum tuberosum HOM05D011415 ORTHO05D010200 4.3e-09 65.9 193 29.5
Pp3c2_23990 Physcomitrium patens HOM05D000886 ORTHO05D000525 7.4e-09 65.1 130 36.2
Solyc10g076810.1 Solanum lycopersicum HOM05D011415 ORTHO05D010200 9.7e-09 64.7 195 30.3
Lj5P327T15 Lonicera japonica HOM05D008582 ORTHO05D010200 1.6e-08 63.9 204 33.3
Oeu053737.1 Olea europaea HOM05D000886 ORTHO05D000525 2.2e-08 63.5 192 28.6
Oeu038044.1 Olea europaea HOM05D000886 ORTHO05D000525 3.7e-08 62.8 194 28.4
arahy.Tifrunner.gnm1.ann1.DS7W66 Arachis hypogaea HOM05D000886 ORTHO05D000525 6.3e-08 62.0 194 29.4
Dinv24474 Davidia involucrata HOM05D008582 ORTHO05D010200 6.3e-08 62.0 75 41.3
SEGI_23564 Sequoiadendron giganteum HOM05D000886 ORTHO05D000525 1.1e-07 61.2 172 32.6
QL03p014337 Quercus lobata HOM05D008582 ORTHO05D010200 1.4e-07 60.8 67 47.8
QL03p015287 Quercus lobata HOM05D008582 ORTHO05D010200 2.4e-07 60.1 129 31.0
Actinidia17919 Actinidia chinensis HOM05D000886 ORTHO05D000525 3.1e-07 59.7 189 29.1
TAR365G0209 Trochodendron aralioides HOM05D000886 ORTHO05D000525 3.1e-07 59.7 191 29.8
Oeu038042.1 Olea europaea HOM05D000886 ORTHO05D000525 4.1e-07 59.3 194 27.8
PSO782G3268 Papaver somniferum HOM05D000886 ORTHO05D000525 5.3e-07 58.9 197 29.4
PGSC0003DMG400006389 Solanum tuberosum HOM05D000886 ORTHO05D000525 5.3e-07 58.9 191 29.3
PSO541G1163 Papaver somniferum HOM05D000886 ORTHO05D000525 9.0e-07 58.2 194 28.9
CSS0029635 Camellia sinensis var. sinensis HOM05D000886 ORTHO05D000525 1.2e-06 57.8 195 29.2
Cc00_g29270 Coffea canephora HOM05D000886 ORTHO05D000525 1.2e-06 57.8 196 28.6
EL10Ac4g09474 Beta vulgaris HOM05D000886 ORTHO05D000525 1.5e-06 57.4 193 29.5
COL.COLO4_23199 Corchorus olitorius HOM05D000886 ORTHO05D000525 1.5e-06 57.4 189 29.6
Cfa016274 Carpinus fangiana HOM05D000886 ORTHO05D000525 2.0e-06 57.0 195 28.2
PSO675G6200 Papaver somniferum HOM05D000886 ORTHO05D000525 2.0e-06 57.0 194 26.8
Solyc01g100680.1 Solanum lycopersicum HOM05D000886 ORTHO05D000525 2.0e-06 57.0 197 29.4
arahy.Tifrunner.gnm1.ann1.R5PY9S Arachis hypogaea HOM05D000886 ORTHO05D000525 3.4e-06 56.2 196 27.6
CiPaw.01G083200 Carya illinoinensis HOM05D000886 ORTHO05D000525 3.4e-06 56.2 195 29.7
CBR_g26360 Chara braunii HOM05D000886 ORTHO05D000525 3.4e-06 56.2 203 27.1
SalBow3G0713 Salvia bowleyana HOM05D000886 ORTHO05D000525 3.4e-06 56.2 194 30.9
TPR.G39393 Trifolium pratense HOM05D000886 ORTHO05D000525 3.4e-06 56.2 201 27.9
SHI02776 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-06 55.8 189 27.5
arahy.Tifrunner.gnm1.ann1.JZYH7X Arachis hypogaea HOM05D000886 ORTHO05D000525 5.9e-06 55.5 189 26.5
TPR.G38597 Trifolium pratense HOM05D000886 ORTHO05D000525 5.9e-06 55.5 135 34.1
TAR636G3206 Trochodendron aralioides HOM05D000886 ORTHO05D000525 5.9e-06 55.5 195 27.7
SMO230G0079 Selaginella moellendorffii HOM05D000886 ORTHO05D000525 7.7e-06 55.1 181 30.4


User provided reference genes

Program Settings