Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 5.0e-168 594.3 299 100.0
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 6.0e-113 411.4 298 74.5
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 2.1e-105 386.3 304 66.1
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 1.8e-88 330.1 301 59.8
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 3.2e-82 309.3 306 56.9
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 5.5e-82 308.5 310 54.8
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 6.7e-80 301.6 310 55.5
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 1.1e-79 300.8 364 48.4
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 5.7e-79 298.5 306 55.6
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 1.3e-78 297.4 294 55.1
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 3.7e-78 295.8 305 54.1
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 6.3e-78 295.0 364 48.1
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 6.3e-78 295.0 306 52.9
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 1.4e-77 293.9 303 54.1
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 5.9e-76 288.5 303 53.8
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 2.2e-75 286.6 347 50.4
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 2.7e-73 279.6 325 50.5
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 3.6e-73 279.3 394 45.2
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 8.0e-73 278.1 325 50.2
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 2.6e-71 273.1 306 53.9
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 6.3e-70 268.5 303 51.2
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 2.4e-69 266.5 310 50.0
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 4.5e-68 262.3 309 48.9
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 1.3e-67 260.8 304 50.0
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 2.9e-67 259.6 297 52.9
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 6.5e-67 258.5 313 48.9
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 2.1e-65 253.4 337 47.5
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 1.2e-63 247.7 359 44.8
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 2.6e-63 246.5 396 41.2
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 2.2e-62 243.4 304 51.0
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 4.8e-62 242.3 361 43.8
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 1.8e-61 240.4 301 47.5
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 1.8e-61 240.4 303 46.9
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 3.1e-61 239.6 349 43.6
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 7.0e-61 238.4 402 39.8
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 1.6e-60 237.3 297 46.5
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 3.5e-60 236.1 301 47.2
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 4.5e-60 235.7 294 46.6
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 2.2e-59 233.4 402 39.6
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 2.9e-59 233.0 389 42.7
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 2.9e-59 233.0 389 42.4
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 3.8e-59 232.6 340 44.1
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 6.5e-59 231.9 363 44.4
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 2.5e-58 229.9 308 45.1
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 7.2e-58 228.4 351 41.3
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 9.4e-58 228.0 310 46.8
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 1.6e-57 227.3 361 41.8
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 2.7e-57 226.5 313 45.7
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 4.7e-57 225.7 320 44.1
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 8.0e-57 224.9 325 44.6
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 3.0e-56 223.0 312 45.8
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 3.0e-56 223.0 283 47.0
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 6.8e-56 221.9 355 41.1
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 8.8e-56 221.5 286 45.1
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 2.0e-55 220.3 358 40.5
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 3.4e-55 219.5 348 40.8
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 9.8e-55 218.0 359 40.7
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 1.3e-54 217.6 323 43.0
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 1.3e-54 217.6 311 46.0
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 1.7e-54 217.2 307 46.3
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 2.2e-54 216.9 298 46.3
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 6.3e-54 215.3 318 42.8
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 6.3e-54 215.3 311 44.7
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 1.1e-53 214.5 361 41.0
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 1.4e-53 214.2 312 45.5
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 1.4e-53 214.2 311 43.4
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 1.8e-53 213.8 321 42.1
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 7.0e-53 211.8 273 48.0
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 1.2e-52 211.1 353 40.8
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 2.0e-52 210.3 355 42.3
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 1.0e-51 208.0 303 44.9
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 3.8e-51 206.1 248 48.4
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 6.6e-51 205.3 317 44.2
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.1e-50 204.5 312 43.3
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 3.3e-50 203.0 233 48.9
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 4.2e-50 202.6 292 43.5
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 7.2e-50 201.8 296 43.2
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 1.2e-49 201.1 259 45.9
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 1.6e-49 200.7 377 37.7
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 2.1e-49 200.3 342 39.2
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 4.7e-49 199.1 289 41.9
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 8.0e-49 198.4 185 56.2
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 1.4e-48 197.6 308 40.6
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 1.8e-48 197.2 340 39.7
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 2.3e-48 196.8 233 48.1
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 3.0e-48 196.4 318 42.5
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 5.7e-47 192.2 349 39.8
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 5.7e-47 192.2 327 39.8
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 4.9e-46 189.1 354 35.9
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 6.3e-46 188.7 323 40.9
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 6.3e-46 188.7 404 35.4
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 1.4e-45 187.6 334 38.9
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 1.8e-45 187.2 310 39.0
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 9.2e-45 184.9 335 39.7
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 9.2e-45 184.9 335 39.7
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 3.5e-44 183.0 338 39.1
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 8.6e-43 178.3 268 42.5
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 1.1e-42 177.9 324 35.8
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.5e-42 177.6 349 38.1
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 1.2e-41 174.5 270 42.6
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 2.1e-41 173.7 271 42.8
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 3.4e-39 166.4 313 40.9
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 4.3e-34 149.4 185 47.6
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 4.3e-34 149.4 278 38.8
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 9.5e-34 148.3 313 32.6
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 1.6e-33 147.5 300 36.3
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 4.7e-33 146.0 239 39.7
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 5.2e-32 142.5 172 47.7
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 5.8e-31 139.0 284 37.0
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 3.0e-27 126.7 201 41.3
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 3.3e-26 123.2 264 34.8
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 4.0e-24 116.3 243 35.0
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 5.4e-21 105.9 210 38.6
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.6e-17 94.4 120 44.2
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 1.9e-13 80.9 108 49.1
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 6.0e-12 75.9 94 46.8
AagrBONN_evm.TU.Sc2ySwM_228.1621 Anthoceros agrestis HOM05D006489 ORTHO05D007556 5.3e-08 62.8 151 30.5


User provided reference genes

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