Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.3312 Acer truncatum HOM05D016018 ORTHO05D017146 0.0e+00 1365.1 688 100.0
Atru.chr2.3284 Acer truncatum HOM05D016018 ORTHO05D017146 2.4e-181 639.8 416 83.2
Atru.chr2.3570 Acer truncatum HOM05D016018 ORTHO05D017146 2.2e-49 201.4 294 38.1
Atru.chr5.3235 Acer truncatum HOM05D016018 ORTHO05D017146 2.3e-43 181.4 227 40.1
Atru.chr8.2073 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-42 178.3 623 28.7
Atru.chr3.2350 Acer truncatum HOM05D016018 ORTHO05D017146 5.9e-39 166.8 323 32.5
Atru.chr1.2921 Acer truncatum HOM05D016018 ORTHO05D017146 8.9e-35 152.9 209 39.2
Atru.chr2.740 Acer truncatum HOM05D000092 ORTHO05D000042 7.5e-34 149.8 394 27.7
Atru.chr3.2964 Acer truncatum HOM05D000003 ORTHO05D000006 5.2e-19 100.5 318 33.0
Lalb_Chr23g0273581 Lupinus albus HOM05D002777 ORTHO05D001516 1.3e-14 85.9 221 27.1
Atru.chr5.2819 Acer truncatum HOM05D000493 ORTHO05D017146 3.3e-13 81.3 132 29.5
COL.COLO4_25415 Corchorus olitorius HOM05D009258 ORTHO05D009583 4.7e-12 77.4 185 28.1
Phvul.002G142300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.4e-11 75.9 167 31.1
COL.COLO4_27331 Corchorus olitorius HOM05D009258 ORTHO05D009583 2.4e-11 75.1 162 28.4
Lsat_1_v5_gn_2_49501 Lactuca sativa HOM05D003915 ORTHO05D005386 6.8e-11 73.6 163 31.3
Phvul.001G161800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.2e-10 72.8 185 29.2
Phvul.007G107000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.4e-10 71.2 244 27.9
Phvul.010G066000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.4e-10 71.2 185 30.3
Phvul.L001950 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.4e-10 71.2 180 28.9
LjContig00141g0005868 Lotus japonicus HOM05D008220 ORTHO05D010358 4.4e-10 70.9 162 30.9
Rhsim10G0135400 Rhododendron simsii HOM05D001175 ORTHO05D003291 4.4e-10 70.9 273 24.9
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 5.8e-10 70.5 175 30.3
Phvul.005G131700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.8e-10 70.5 217 29.5
Phvul.010G077150 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.6e-10 70.1 133 30.8
Phvul.002G156300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.2e-09 68.6 207 30.0
Atru.chr4.2674 Acer truncatum HOM05D036312 ORTHO05D000669 2.9e-09 68.2 163 28.2
Medtr2g060030 Medicago truncatula HOM05D008558 ORTHO05D011658 2.9e-09 68.2 157 28.7
Phvul.001G154000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.9e-09 68.2 170 28.8
Phvul.010G016100 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.8e-09 67.8 166 29.5
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.8e-09 67.8 201 23.4
Atru.chr4.3020 Acer truncatum HOM05D016018 ORTHO05D017146 6.4e-09 67.0 240 30.4
Phvul.008G101400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.4e-09 67.0 170 28.8
vmacro14260 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 8.4e-09 66.6 118 30.5
TPR.G19363 Trifolium pratense HOM05D002777 ORTHO05D001516 1.1e-08 66.2 168 22.0
Glyma.05G115300 Glycine max HOM05D002777 ORTHO05D001516 1.4e-08 65.9 159 22.0
Medtr8g045280 Medicago truncatula HOM05D008558 ORTHO05D001516 1.4e-08 65.9 256 23.8
Phvul.002G096200 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.4e-08 65.1 235 27.7
Phvul.011G176000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.4e-08 65.1 204 25.0
Phvul.001G088300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.2e-08 64.7 173 27.7
Phvul.007G156800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.2e-08 64.7 148 30.4
COL.COLO4_15431 Corchorus olitorius HOM05D008263 ORTHO05D009583 4.2e-08 64.3 292 23.3
Atru.chr1.2519 Acer truncatum HOM05D000003 ORTHO05D002259 5.4e-08 63.9 173 31.8
Glyma.20G003900 Glycine max HOM05D002777 ORTHO05D001516 5.4e-08 63.9 150 24.0
Medtr0073s0040 Medicago truncatula HOM05D008558 ORTHO05D001516 7.1e-08 63.5 136 27.9
Medtr6g054900 Medicago truncatula HOM05D008558 ORTHO05D001516 1.2e-07 62.8 169 27.8
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.6e-07 62.4 131 29.0
Lj6g0003824 Lotus japonicus HOM05D002777 ORTHO05D001516 2.1e-07 62.0 128 27.3
Phvul.008G164400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.1e-07 62.0 174 25.3
Phvul.010G135050 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.1e-07 62.0 141 27.7
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.1e-07 62.0 132 26.5
Phvul.004G125000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.7e-07 61.6 158 24.1
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.7e-07 61.6 132 25.8
Thecc.05G216900 Theobroma cacao HOM05D009258 ORTHO05D009583 2.7e-07 61.6 196 24.5
HanXRQChr16g0525111 Helianthus annuus HOM05D003915 ORTHO05D005386 3.5e-07 61.2 156 23.1
Medtr2g103400 Medicago truncatula HOM05D002777 ORTHO05D001516 3.5e-07 61.2 127 27.6
Medtr1g033680 Medicago truncatula HOM05D002777 ORTHO05D001516 4.6e-07 60.8 176 25.0
SEGI_07611 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 4.6e-07 60.8 101 33.7
Dinv12055 Davidia involucrata HOM05D008877 ORTHO05D006370 6.0e-07 60.5 124 24.2
Lj2g0007640 Lotus japonicus HOM05D002777 ORTHO05D001516 6.0e-07 60.5 130 30.8
Lsat_1_v5_gn_9_62980 Lactuca sativa HOM05D003915 ORTHO05D005386 7.8e-07 60.1 177 23.7
Lj2g0021049 Lotus japonicus HOM05D002777 ORTHO05D001516 7.8e-07 60.1 206 22.8
Medtr1g024800 Medicago truncatula HOM05D002777 ORTHO05D001516 7.8e-07 60.1 85 29.4
SEGI_12889 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.0e-06 59.7 222 28.8
SGA_v2.0_scaffold53G19395 Striga asiatica HOM05D000024 ORTHO05D000007 1.0e-06 59.7 141 27.0
HanXRQChr03g0092381 Helianthus annuus HOM05D003915 ORTHO05D001516 1.3e-06 59.3 208 22.6
Phvul.005G121500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.3e-06 59.3 181 27.1
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-06 59.3 262 19.5
SEGI_20317 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.3e-06 59.3 103 33.0
Glyma.02G165100 Glycine max HOM05D002777 ORTHO05D001516 1.7e-06 58.9 211 21.8
HanXRQChr13g0391411 Helianthus annuus HOM05D000003 ORTHO05D000004 1.7e-06 58.9 200 26.5
Medtr5g065250 Medicago truncatula HOM05D002777 ORTHO05D001516 1.7e-06 58.9 149 26.8
Phvul.006G023800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.7e-06 58.9 216 25.9
Phvul.008G144313 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.7e-06 58.9 170 25.9
Phvul.010G072600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.7e-06 58.9 206 23.8
SEGI_22475 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.7e-06 58.9 100 32.0
SEGI_36681 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.7e-06 58.9 104 33.7
Lj5g0002610 Lotus japonicus HOM05D008220 ORTHO05D010358 2.3e-06 58.5 178 23.0
LjContig00357g0008125 Lotus japonicus HOM05D008220 ORTHO05D010358 2.3e-06 58.5 160 28.1
PSO455G0124 Papaver somniferum HOM05D000003 ORTHO05D000007 2.3e-06 58.5 159 23.9
Phvul.003G099400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.3e-06 58.5 184 25.5
TPR.G25363 Trifolium pratense HOM05D007807 ORTHO05D001516 2.3e-06 58.5 221 22.6
Atru.chr1.3840 Acer truncatum HOM05D030068 ORTHO05D017146 3.0e-06 58.2 476 22.5
Phvul.002G198900 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.0e-06 58.2 132 28.0
COL.COLO4_04627 Corchorus olitorius HOM05D008263 ORTHO05D009583 3.9e-06 57.8 162 25.3
Phvul.001G053800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.9e-06 57.8 120 31.7
Phvul.L005801 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.9e-06 57.8 250 24.0
Lj5g0007242 Lotus japonicus HOM05D002777 ORTHO05D001516 5.1e-06 57.4 96 30.2
Phvul.006G002800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.1e-06 57.4 207 23.7
Glyma.16G096100 Glycine max HOM05D002777 ORTHO05D001516 6.6e-06 57.0 133 24.1
Lsat_1_v5_gn_2_124920 Lactuca sativa HOM05D003915 ORTHO05D005386 6.6e-06 57.0 123 26.0
Lj1g0001129 Lotus japonicus HOM05D008220 ORTHO05D010358 6.6e-06 57.0 166 25.3
Medtr8g103960 Medicago truncatula HOM05D008558 ORTHO05D001516 6.6e-06 57.0 74 33.8
Phvul.007G108700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.6e-06 57.0 183 25.1
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 6.6e-06 57.0 94 26.6
SEGI_36971 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 6.6e-06 57.0 80 37.5
vmacro08911 Vaccinium macrocarpon HOM05D000003 ORTHO05D000006 6.6e-06 57.0 124 25.0
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 8.7e-06 56.6 135 25.2
Glyma.13G027700 Glycine max HOM05D002777 ORTHO05D001516 8.7e-06 56.6 161 23.6
Lj6g0028179 Lotus japonicus HOM05D002777 ORTHO05D001516 8.7e-06 56.6 417 22.8
Medtr7g108760 Medicago truncatula HOM05D008558 ORTHO05D000006 8.7e-06 56.6 93 29.0
Medtr8g058470 Medicago truncatula HOM05D008558 ORTHO05D000006 8.7e-06 56.6 93 29.0
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 8.7e-06 56.6 118 24.6
Phvul.008G195328 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.7e-06 56.6 156 26.9
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.7e-06 56.6 260 22.3


User provided reference genes

Program Settings