Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.3179 Acer truncatum HOM05D006170 ORTHO05D007794 3.1e-68 261.5 121 100.0
Atru.chr2.3188 Acer truncatum HOM05D006170 ORTHO05D007794 3.1e-68 261.5 121 100.0
Atru.chr2.3172 Acer truncatum HOM05D006170 ORTHO05D007794 3.6e-56 221.5 109 94.5
Atru.chr2.3180 Acer truncatum HOM05D006170 ORTHO05D007794 1.2e-54 216.5 109 92.7
Atru.chr2.3169 Acer truncatum HOM05D006170 ORTHO05D007794 1.4e-52 209.5 103 93.2
Ciclev10009527m.g Citrus clementina HOM05D006170 ORTHO05D007794 1.1e-41 173.3 107 74.8
Lalb_Chr14g0366041 Lupinus albus HOM05D006170 ORTHO05D007794 6.1e-40 167.5 114 70.2
COL.COLO4_09554 Corchorus olitorius HOM05D006170 ORTHO05D007794 8.0e-40 167.2 106 71.7
Glyma.12G215300 Glycine max HOM05D006170 ORTHO05D007794 1.0e-39 166.8 109 72.5
Cpa.g.sc97.82 Carica papaya HOM05D006170 ORTHO05D007794 1.4e-39 166.4 119 63.9
Glyma.13G286300 Glycine max HOM05D006170 ORTHO05D007794 1.8e-39 166.0 109 72.5
VMungo1080G0982 Vigna mungo HOM05D006170 ORTHO05D007794 1.8e-39 166.0 109 71.6
QL08p013814 Quercus lobata HOM05D006170 ORTHO05D007794 3.0e-39 165.2 112 67.9
FvH4_3g21680 Fragaria vesca HOM05D006170 ORTHO05D007794 4.0e-39 164.9 118 66.1
FAN25G0963 Fragaria x ananassa HOM05D006170 ORTHO05D007794 5.2e-39 164.5 118 66.1
Lj3g0005940 Lotus japonicus HOM05D006170 ORTHO05D007794 6.8e-39 164.1 109 72.5
Manes.03G122000 Manihot esculenta HOM05D006170 ORTHO05D007794 6.8e-39 164.1 107 70.1
arahy.Tifrunner.gnm1.ann1.I4GK8M Arachis hypogaea HOM05D006170 ORTHO05D007794 8.8e-39 163.7 114 66.7
arahy.Tifrunner.gnm1.ann1.IBV8H8 Arachis hypogaea HOM05D006170 ORTHO05D007794 8.8e-39 163.7 114 66.7
GSVIVG01014582001 Vitis vinifera HOM05D006170 ORTHO05D007794 2.0e-38 162.5 117 65.0
FAN21G2913 Fragaria x ananassa HOM05D006170 ORTHO05D007794 2.6e-38 162.2 118 64.4
Phvul.005G090600 Phaseolus vulgaris HOM05D006170 ORTHO05D007794 2.6e-38 162.2 109 69.7
RcHm_v2.0_Chr5g0037161 Rosa chinensis HOM05D006170 ORTHO05D007794 4.4e-38 161.4 118 63.6
CiPaw.11G182800 Carya illinoinensis HOM05D006170 ORTHO05D007794 5.7e-38 161.0 112 67.9
Potri.001G416200 Populus trichocarpa HOM05D006170 ORTHO05D007794 5.7e-38 161.0 107 66.4
Duzib268G1633 Durio zibethinus HOM05D006170 ORTHO05D007794 9.8e-38 160.2 107 72.0
FAN16G2181 Fragaria x ananassa HOM05D006170 ORTHO05D007794 9.8e-38 160.2 118 64.4
Cfa020437 Carpinus fangiana HOM05D006170 ORTHO05D007794 1.3e-37 159.8 95 71.6
Duzib213G0548 Durio zibethinus HOM05D006170 ORTHO05D007794 1.3e-37 159.8 107 70.1
Lalb_Chr22g0357121 Lupinus albus HOM05D006170 ORTHO05D007794 1.3e-37 159.8 109 67.0
Thecc.07G055300 Theobroma cacao HOM05D006170 ORTHO05D007794 1.7e-37 159.5 107 70.1
Haze_09591 Corylus avellana HOM05D006170 ORTHO05D007794 2.2e-37 159.1 112 62.5
Sabra16G0282800 Salix brachista HOM05D006170 ORTHO05D007794 3.7e-37 158.3 107 63.6
TWI39G0874 Tripterygium wilfordii HOM05D006170 ORTHO05D007794 6.3e-37 157.5 94 75.5
MD03G1213300 Malus domestica HOM05D006170 ORTHO05D007794 8.3e-37 157.1 121 62.0
TPR.G36813 Trifolium pratense HOM05D006170 ORTHO05D007794 1.1e-36 156.8 109 65.1
Gohir.A13G141800 Gossypium hirsutum HOM05D006170 ORTHO05D007794 1.4e-36 156.4 107 69.2
TAR627G0053 Trochodendron aralioides HOM05D006170 ORTHO05D007794 1.4e-36 156.4 113 67.3
TAR627G0202 Trochodendron aralioides HOM05D006170 ORTHO05D007794 1.8e-36 156.0 113 67.3
MD11G1228200 Malus domestica HOM05D006170 ORTHO05D007794 3.1e-36 155.2 111 66.7
Gohir.D13G146500 Gossypium hirsutum HOM05D006170 ORTHO05D007794 4.1e-36 154.8 107 68.2
Gorai.013G164300 Gossypium raimondii HOM05D006170 ORTHO05D007794 4.1e-36 154.8 107 68.2
CiPaw.12G125700 Carya illinoinensis HOM05D006170 ORTHO05D007794 5.4e-36 154.5 112 63.4
Sabra11G0118800 Salix brachista HOM05D006170 ORTHO05D007794 1.2e-35 153.3 105 65.7
Medtr2g082180 Medicago truncatula HOM05D006170 ORTHO05D007794 1.6e-35 152.9 109 64.2
Potri.011G131800 Populus trichocarpa HOM05D006170 ORTHO05D007794 1.6e-35 152.9 105 65.7
Manes.15G077500 Manihot esculenta HOM05D006170 ORTHO05D007794 5.9e-35 151.0 94 73.4
Atru.chr2.3190 Acer truncatum HOM05D006170 ORTHO05D007794 1.0e-34 150.2 75 93.3
Ca_01769_v3 Cicer arietinum L. HOM05D006170 ORTHO05D007794 3.8e-34 148.3 109 62.4
ClCG10G005700 Citrullus lanatus HOM05D006170 ORTHO05D007794 1.5e-33 146.4 105 64.8
Lj8A165T103 Lonicera japonica HOM05D006170 ORTHO05D007794 1.5e-33 146.4 94 71.3
Carub.0008s1492 Capsella rubella HOM05D006170 ORTHO05D007794 3.3e-33 145.2 109 61.5
Sed0018130 Sechium edule HOM05D006170 ORTHO05D007794 3.3e-33 145.2 106 62.3
Dinv22315 Davidia involucrata HOM05D006170 ORTHO05D007794 4.3e-33 144.8 91 75.8
CsaV3_3G005420 Cucumis sativus L. HOM05D006170 ORTHO05D007794 7.3e-33 144.1 103 63.1
Thhalv10014749m.g Eutrema salsugineum HOM05D006170 ORTHO05D007794 7.3e-33 144.1 109 62.4
AT5G54660 Arabidopsis thaliana HOM05D006170 ORTHO05D007794 1.2e-32 143.3 109 60.6
MELO3C025424.2 Cucumis melo HOM05D006170 ORTHO05D007794 1.6e-32 142.9 101 61.4
Psat5g249640 Pisum sativum HOM05D006170 ORTHO05D007794 1.6e-32 142.9 111 60.4
Gohir.A01G073600 Gossypium hirsutum HOM05D006170 ORTHO05D007794 2.8e-32 142.1 109 65.1
Gorai.002G081600 Gossypium raimondii HOM05D006170 ORTHO05D007794 3.6e-32 141.7 109 65.1
Eucgr.F00998 Eucalyptus grandis HOM05D006170 ORTHO05D007794 8.0e-32 140.6 91 68.1
TAR629G2130 Trochodendron aralioides HOM05D000141 ORTHO05D001968 8.0e-32 140.6 102 66.7
Actinidia09955 Actinidia chinensis HOM05D006170 ORTHO05D007794 1.4e-31 139.8 107 61.7
BcaB05g22153 Brassica carinata HOM05D006170 ORTHO05D007794 1.4e-31 139.8 109 58.7
RhsimUnG0253700 Rhododendron simsii HOM05D006170 ORTHO05D007794 1.4e-31 139.8 116 62.1
Gohir.D01G060200 Gossypium hirsutum HOM05D006170 ORTHO05D007794 1.8e-31 139.4 109 64.2
PGR083G1948 Punica granatum HOM05D006170 ORTHO05D007794 1.8e-31 139.4 93 69.9
CSS0048908 Camellia sinensis var. sinensis HOM05D006170 ORTHO05D007794 2.3e-31 139.0 104 62.5
Cc05_g13150 Coffea canephora HOM05D006170 ORTHO05D007794 3.0e-31 138.7 108 61.1
Sp6g16620 Schrenkiella parvula HOM05D006170 ORTHO05D007794 4.0e-31 138.3 109 59.6
BcaC03g14298 Brassica carinata HOM05D006170 ORTHO05D007794 5.2e-31 137.9 108 59.3
C02p16810 Brassica napus HOM05D006170 ORTHO05D007794 5.2e-31 137.9 108 59.3
BolC2t07784H Brassica oleracea HOM05D006170 ORTHO05D007794 5.2e-31 137.9 108 59.3
THA.LOC104799886 Tarenaya hassleriana HOM05D006170 ORTHO05D007794 5.2e-31 137.9 109 62.4
Aa31LG3G10590 Aethionema arabicum HOM05D006170 ORTHO05D007794 6.8e-31 137.5 105 60.0
CSS0004985 Camellia sinensis var. sinensis HOM05D006170 ORTHO05D007794 6.8e-31 137.5 104 61.5
Aqoxy1G03815 Aquilegia oxysepala HOM05D006170 ORTHO05D007794 8.9e-31 137.1 91 65.9
VMungo1127G1132 Vigna mungo HOM05D006170 ORTHO05D007794 8.9e-31 137.1 104 63.5
A02p10120 Brassica napus HOM05D006170 ORTHO05D007794 1.2e-30 136.7 108 58.3
BraA02t06083Z Brassica rapa HOM05D006170 ORTHO05D007794 1.2e-30 136.7 108 58.3
CARHR267970 Cardamine hirsuta HOM05D006170 ORTHO05D007794 2.0e-30 136.0 106 59.4
vmacro09751 Vaccinium macrocarpon HOM05D006170 ORTHO05D007794 2.0e-30 136.0 96 68.8
AUR62015633 Chenopodium quinoa HOM05D006170 ORTHO05D007794 3.4e-30 135.2 109 57.8
EL10Ac4g07990 Beta vulgaris HOM05D006170 ORTHO05D007794 5.7e-30 134.4 99 58.6
BcaB08g35828 Brassica carinata HOM05D006170 ORTHO05D007794 5.7e-30 134.4 109 58.7
AUR62029239 Chenopodium quinoa HOM05D006170 ORTHO05D007794 5.7e-30 134.4 109 56.9
AL8G30110 Arabidopsis lyrata HOM05D006170 ORTHO05D007794 7.5e-30 134.0 110 58.2
PSO832G2973 Papaver somniferum HOM05D006170 ORTHO05D007794 7.5e-30 134.0 94 62.8
Hund23320 Selenicereus undatus HOM05D006170 ORTHO05D007794 1.3e-29 133.3 96 58.3
MBI18_g24149_MAGBIO Magnolia biondii HOM05D006170 ORTHO05D007794 1.7e-29 132.9 104 60.6
Nn1g06950 Nelumbo nucifera HOM05D006170 ORTHO05D007794 2.2e-29 132.5 97 63.9
PSO210G3318 Papaver somniferum HOM05D006170 ORTHO05D007794 2.2e-29 132.5 94 60.6
C09p45040 Brassica napus HOM05D006170 ORTHO05D007794 2.9e-29 132.1 109 56.9
CANSAT11G1152 Cannabis sativa HOM05D006170 ORTHO05D007794 2.9e-29 132.1 114 57.9
Peaxi162Scf01086g00027 Petunia axillaris HOM05D006170 ORTHO05D007794 3.7e-29 131.7 94 60.6
Sc03g0009170 Simmondsia chinensis HOM05D006170 ORTHO05D007794 3.7e-29 131.7 108 57.4
BcaC04g20316 Brassica carinata HOM05D006170 ORTHO05D007794 1.8e-28 129.4 109 56.0
BolC9t57379H Brassica oleracea HOM05D006170 ORTHO05D007794 1.8e-28 129.4 109 56.0
CAN.G337.156 Capsicum annuum HOM05D006170 ORTHO05D007794 4.1e-28 128.3 96 62.5
PGSC0003DMG400019265 Solanum tuberosum HOM05D006170 ORTHO05D007794 7.0e-28 127.5 96 61.5
Oeu013861.1 Olea europaea HOM05D000359 ORTHO05D000251 2.0e-27 125.9 99 62.6
Solyc07g064020.4 Solanum lycopersicum HOM05D006170 ORTHO05D007794 2.7e-27 125.6 109 56.0
BraA10t43291Z Brassica rapa HOM05D006170 ORTHO05D007794 3.5e-27 125.2 109 55.0
Lsat_1_v5_gn_7_108120 Lactuca sativa HOM05D006170 ORTHO05D007794 4.6e-27 124.8 103 58.3
CDE05G2462 Ceratophyllum demersum HOM05D006170 ORTHO05D007794 1.0e-26 123.6 106 57.5
A10p11950 Brassica napus HOM05D006170 ORTHO05D007794 1.7e-26 122.9 118 50.8
ECA236G0468 Erigeron canadensis HOM05D006170 ORTHO05D007794 8.6e-26 120.6 103 57.3
Oeu007615.3 Olea europaea HOM05D006170 ORTHO05D007794 8.6e-26 120.6 95 62.1
HPP92_000867 Vanilla planifolia HOM05D006170 ORTHO05D007794 1.5e-25 119.8 92 58.7
HanXRQChr11g0332711 Helianthus annuus HOM05D006170 ORTHO05D007794 4.7e-24 114.8 106 54.7
unitig_37.g12585 Utricularia gibba HOM05D006170 ORTHO05D007794 4.7e-24 114.8 104 54.8
Nitab4.5_0000397g0160 Nicotiana tabacum HOM05D006170 ORTHO05D007794 1.0e-23 113.6 92 58.7
SGA_v2.0_scaffold34G13954 Striga asiatica HOM05D000141 ORTHO05D001968 2.0e-22 109.4 106 50.0
Migut.M01817 Erythranthe guttata HOM05D006170 ORTHO05D007794 2.6e-22 109.0 112 54.5
CDE05G1194 Ceratophyllum demersum HOM05D006170 ORTHO05D007794 8.3e-21 104.0 106 52.8
Ah.04g165500 Amaranthus hybridus HOM05D006170 ORTHO05D007794 5.4e-20 101.3 90 53.3
Os05g0500500 Oryza sativa ssp. japonica HOM05D006170 ORTHO05D007794 1.6e-19 99.8 106 46.2
Sopen07g032160 Solanum pennellii HOM05D006170 ORTHO05D007794 3.9e-18 95.1 74 59.5
SalBow7G2464 Salvia bowleyana HOM05D006170 ORTHO05D007794 2.5e-17 92.4 102 48.0
Zm00001eb291920 Zea mays HOM05D006170 ORTHO05D007794 9.5e-17 90.5 88 48.9
Zm00001eb352720 Zea mays HOM05D006170 ORTHO05D007794 2.1e-16 89.4 86 52.3
Nitab4.5_0000104g0260 Nicotiana tabacum HOM05D006170 ORTHO05D007794 2.3e-10 69.3 39 74.4
SEGI_04384 Sequoiadendron giganteum HOM05D006170 ORTHO05D000001 6.6e-10 67.8 78 39.7
ATR1088G045 Amborella trichopoda HOM05D006170 ORTHO05D007794 3.3e-09 65.5 55 56.4
SEGI_21038 Sequoiadendron giganteum HOM05D000136 ORTHO05D007794 6.8e-07 57.8 85 35.3


User provided reference genes

Program Settings