Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.3172 Acer truncatum HOM05D006170 ORTHO05D007794 2.2e-63 245.4 114 100.0
Atru.chr2.3169 Acer truncatum HOM05D006170 ORTHO05D007794 8.6e-60 233.4 108 99.1
Atru.chr2.3179 Acer truncatum HOM05D006170 ORTHO05D007794 2.6e-56 221.9 109 94.5
Atru.chr2.3180 Acer truncatum HOM05D006170 ORTHO05D007794 2.6e-56 221.9 112 92.0
Atru.chr2.3188 Acer truncatum HOM05D006170 ORTHO05D007794 2.6e-56 221.9 109 94.5
Ciclev10009527m.g Citrus clementina HOM05D006170 ORTHO05D007794 9.5e-43 176.8 110 73.6
COL.COLO4_09554 Corchorus olitorius HOM05D006170 ORTHO05D007794 1.4e-41 172.9 111 71.2
Glyma.12G215300 Glycine max HOM05D006170 ORTHO05D007794 5.2e-41 171.0 109 73.4
Lalb_Chr14g0366041 Lupinus albus HOM05D006170 ORTHO05D007794 5.2e-41 171.0 109 74.3
Glyma.13G286300 Glycine max HOM05D006170 ORTHO05D007794 8.9e-41 170.2 109 73.4
VMungo1080G0982 Vigna mungo HOM05D006170 ORTHO05D007794 8.9e-41 170.2 109 72.5
Lj3g0005940 Lotus japonicus HOM05D006170 ORTHO05D007794 3.4e-40 168.3 109 73.4
arahy.Tifrunner.gnm1.ann1.I4GK8M Arachis hypogaea HOM05D006170 ORTHO05D007794 4.4e-40 167.9 109 70.6
arahy.Tifrunner.gnm1.ann1.IBV8H8 Arachis hypogaea HOM05D006170 ORTHO05D007794 4.4e-40 167.9 109 70.6
Cpa.g.sc97.82 Carica papaya HOM05D006170 ORTHO05D007794 4.4e-40 167.9 109 69.7
QL08p013814 Quercus lobata HOM05D006170 ORTHO05D007794 4.4e-40 167.9 107 72.0
Phvul.005G090600 Phaseolus vulgaris HOM05D006170 ORTHO05D007794 1.3e-39 166.4 109 70.6
Duzib268G1633 Durio zibethinus HOM05D006170 ORTHO05D007794 2.2e-39 165.6 109 72.5
Duzib213G0548 Durio zibethinus HOM05D006170 ORTHO05D007794 2.9e-39 165.2 109 70.6
Manes.03G122000 Manihot esculenta HOM05D006170 ORTHO05D007794 2.9e-39 165.2 97 76.3
Thecc.07G055300 Theobroma cacao HOM05D006170 ORTHO05D007794 3.7e-39 164.9 109 70.6
FvH4_3g21680 Fragaria vesca HOM05D006170 ORTHO05D007794 4.9e-39 164.5 108 71.3
Lalb_Chr22g0357121 Lupinus albus HOM05D006170 ORTHO05D007794 4.9e-39 164.5 109 67.9
FAN25G0963 Fragaria x ananassa HOM05D006170 ORTHO05D007794 6.4e-39 164.1 108 71.3
GSVIVG01014582001 Vitis vinifera HOM05D006170 ORTHO05D007794 6.4e-39 164.1 107 71.0
CiPaw.11G182800 Carya illinoinensis HOM05D006170 ORTHO05D007794 8.3e-39 163.7 107 72.0
Sabra16G0282800 Salix brachista HOM05D006170 ORTHO05D007794 1.4e-38 162.9 97 71.1
Cfa020437 Carpinus fangiana HOM05D006170 ORTHO05D007794 1.9e-38 162.5 90 76.7
Haze_09591 Corylus avellana HOM05D006170 ORTHO05D007794 3.2e-38 161.8 107 66.4
FAN21G2913 Fragaria x ananassa HOM05D006170 ORTHO05D007794 3.2e-38 161.8 108 69.4
Gohir.A13G141800 Gossypium hirsutum HOM05D006170 ORTHO05D007794 3.2e-38 161.8 109 69.7
TPR.G36813 Trifolium pratense HOM05D006170 ORTHO05D007794 4.1e-38 161.4 109 66.1
TWI39G0874 Tripterygium wilfordii HOM05D006170 ORTHO05D007794 4.1e-38 161.4 94 76.6
RcHm_v2.0_Chr5g0037161 Rosa chinensis HOM05D006170 ORTHO05D007794 5.4e-38 161.0 108 68.5
Gohir.D13G146500 Gossypium hirsutum HOM05D006170 ORTHO05D007794 9.2e-38 160.2 109 68.8
Gorai.013G164300 Gossypium raimondii HOM05D006170 ORTHO05D007794 9.2e-38 160.2 109 68.8
Potri.001G416200 Populus trichocarpa HOM05D006170 ORTHO05D007794 9.2e-38 160.2 97 72.2
FAN16G2181 Fragaria x ananassa HOM05D006170 ORTHO05D007794 1.2e-37 159.8 108 69.4
TAR627G0053 Trochodendron aralioides HOM05D006170 ORTHO05D007794 2.1e-37 159.1 105 70.5
TAR627G0202 Trochodendron aralioides HOM05D006170 ORTHO05D007794 2.7e-37 158.7 105 70.5
CiPaw.12G125700 Carya illinoinensis HOM05D006170 ORTHO05D007794 6.0e-37 157.5 107 67.3
MD03G1213300 Malus domestica HOM05D006170 ORTHO05D007794 6.0e-37 157.5 111 66.7
Medtr2g082180 Medicago truncatula HOM05D006170 ORTHO05D007794 7.8e-37 157.1 109 65.1
Atru.chr2.3190 Acer truncatum HOM05D006170 ORTHO05D007794 2.3e-36 155.6 78 92.3
Manes.15G077500 Manihot esculenta HOM05D006170 ORTHO05D007794 3.9e-36 154.8 95 73.7
Potri.011G131800 Populus trichocarpa HOM05D006170 ORTHO05D007794 6.6e-36 154.1 96 70.8
MD11G1228200 Malus domestica HOM05D006170 ORTHO05D007794 8.6e-36 153.7 111 65.8
Sabra11G0118800 Salix brachista HOM05D006170 ORTHO05D007794 1.1e-35 153.3 96 69.8
Ca_01769_v3 Cicer arietinum L. HOM05D006170 ORTHO05D007794 1.9e-35 152.5 109 63.3
Lj8A165T103 Lonicera japonica HOM05D006170 ORTHO05D007794 9.5e-35 150.2 95 71.6
Dinv22315 Davidia involucrata HOM05D006170 ORTHO05D007794 1.6e-34 149.4 95 74.7
ClCG10G005700 Citrullus lanatus HOM05D006170 ORTHO05D007794 3.6e-34 148.3 105 64.8
Gohir.A01G073600 Gossypium hirsutum HOM05D006170 ORTHO05D007794 6.2e-34 147.5 111 65.8
Gorai.002G081600 Gossypium raimondii HOM05D006170 ORTHO05D007794 8.1e-34 147.1 111 65.8
Psat5g249640 Pisum sativum HOM05D006170 ORTHO05D007794 8.1e-34 147.1 111 61.3
Sed0018130 Sechium edule HOM05D006170 ORTHO05D007794 8.1e-34 147.1 106 62.3
CsaV3_3G005420 Cucumis sativus L. HOM05D006170 ORTHO05D007794 1.8e-33 146.0 103 63.1
MELO3C025424.2 Cucumis melo HOM05D006170 ORTHO05D007794 4.0e-33 144.8 101 61.4
Gohir.D01G060200 Gossypium hirsutum HOM05D006170 ORTHO05D007794 4.0e-33 144.8 111 64.9
TAR629G2130 Trochodendron aralioides HOM05D000141 ORTHO05D001968 4.0e-33 144.8 103 67.0
CSS0048908 Camellia sinensis var. sinensis HOM05D006170 ORTHO05D007794 8.9e-33 143.7 107 62.6
PGR083G1948 Punica granatum HOM05D006170 ORTHO05D007794 8.9e-33 143.7 94 70.2
Carub.0008s1492 Capsella rubella HOM05D006170 ORTHO05D007794 1.2e-32 143.3 106 61.3
RhsimUnG0253700 Rhododendron simsii HOM05D006170 ORTHO05D007794 1.2e-32 143.3 109 66.1
Eucgr.F00998 Eucalyptus grandis HOM05D006170 ORTHO05D007794 1.5e-32 142.9 100 65.0
CSS0004985 Camellia sinensis var. sinensis HOM05D006170 ORTHO05D007794 2.6e-32 142.1 107 61.7
Thhalv10014749m.g Eutrema salsugineum HOM05D006170 ORTHO05D007794 2.6e-32 142.1 106 62.3
Actinidia09955 Actinidia chinensis HOM05D006170 ORTHO05D007794 3.4e-32 141.7 107 61.7
Aa31LG3G10590 Aethionema arabicum HOM05D006170 ORTHO05D007794 3.4e-32 141.7 111 58.6
THA.LOC104799886 Tarenaya hassleriana HOM05D006170 ORTHO05D007794 3.4e-32 141.7 110 62.7
Aqoxy1G03815 Aquilegia oxysepala HOM05D006170 ORTHO05D007794 4.4e-32 141.4 92 66.3
AT5G54660 Arabidopsis thaliana HOM05D006170 ORTHO05D007794 4.4e-32 141.4 106 60.4
vmacro09751 Vaccinium macrocarpon HOM05D006170 ORTHO05D007794 9.9e-32 140.2 96 69.8
CARHR267970 Cardamine hirsuta HOM05D006170 ORTHO05D007794 1.3e-31 139.8 107 59.8
AUR62015633 Chenopodium quinoa HOM05D006170 ORTHO05D007794 1.7e-31 139.4 109 58.7
AUR62029239 Chenopodium quinoa HOM05D006170 ORTHO05D007794 2.9e-31 138.7 109 57.8
BcaB05g22153 Brassica carinata HOM05D006170 ORTHO05D007794 4.9e-31 137.9 106 58.5
VMungo1127G1132 Vigna mungo HOM05D006170 ORTHO05D007794 6.4e-31 137.5 105 62.9
MBI18_g24149_MAGBIO Magnolia biondii HOM05D006170 ORTHO05D007794 8.4e-31 137.1 105 61.0
EL10Ac4g07990 Beta vulgaris HOM05D006170 ORTHO05D007794 1.1e-30 136.7 94 62.8
CANSAT11G1152 Cannabis sativa HOM05D006170 ORTHO05D007794 1.1e-30 136.7 117 58.1
PSO832G2973 Papaver somniferum HOM05D006170 ORTHO05D007794 1.1e-30 136.7 94 63.8
Hund23320 Selenicereus undatus HOM05D006170 ORTHO05D007794 1.1e-30 136.7 94 60.6
BcaC03g14298 Brassica carinata HOM05D006170 ORTHO05D007794 1.4e-30 136.3 105 59.0
C02p16810 Brassica napus HOM05D006170 ORTHO05D007794 1.4e-30 136.3 105 59.0
BolC2t07784H Brassica oleracea HOM05D006170 ORTHO05D007794 1.4e-30 136.3 105 59.0
Sp6g16620 Schrenkiella parvula HOM05D006170 ORTHO05D007794 1.4e-30 136.3 106 59.4
Nn1g06950 Nelumbo nucifera HOM05D006170 ORTHO05D007794 1.9e-30 136.0 91 67.0
Peaxi162Scf01086g00027 Petunia axillaris HOM05D006170 ORTHO05D007794 2.4e-30 135.6 94 61.7
Sc03g0009170 Simmondsia chinensis HOM05D006170 ORTHO05D007794 2.4e-30 135.6 106 59.4
A02p10120 Brassica napus HOM05D006170 ORTHO05D007794 3.2e-30 135.2 105 58.1
BraA02t06083Z Brassica rapa HOM05D006170 ORTHO05D007794 3.2e-30 135.2 105 58.1
PSO210G3318 Papaver somniferum HOM05D006170 ORTHO05D007794 3.2e-30 135.2 94 61.7
Cc05_g13150 Coffea canephora HOM05D006170 ORTHO05D007794 4.1e-30 134.8 108 60.2
BcaB08g35828 Brassica carinata HOM05D006170 ORTHO05D007794 2.1e-29 132.5 106 58.5
AL8G30110 Arabidopsis lyrata HOM05D006170 ORTHO05D007794 2.7e-29 132.1 107 57.9
CAN.G337.156 Capsicum annuum HOM05D006170 ORTHO05D007794 2.7e-29 132.1 96 63.5
C09p45040 Brassica napus HOM05D006170 ORTHO05D007794 1.0e-28 130.2 106 56.6
PGSC0003DMG400019265 Solanum tuberosum HOM05D006170 ORTHO05D007794 1.0e-28 130.2 96 61.5
Solyc07g064020.4 Solanum lycopersicum HOM05D006170 ORTHO05D007794 3.0e-28 128.6 109 56.0
BcaC04g20316 Brassica carinata HOM05D006170 ORTHO05D007794 6.6e-28 127.5 106 55.7
BolC9t57379H Brassica oleracea HOM05D006170 ORTHO05D007794 6.6e-28 127.5 106 55.7
CDE05G2462 Ceratophyllum demersum HOM05D006170 ORTHO05D007794 6.6e-28 127.5 107 57.9
Lsat_1_v5_gn_7_108120 Lactuca sativa HOM05D006170 ORTHO05D007794 1.9e-27 125.9 103 58.3
A10p11950 Brassica napus HOM05D006170 ORTHO05D007794 2.5e-27 125.6 107 55.1
Oeu007615.3 Olea europaea HOM05D006170 ORTHO05D007794 9.6e-27 123.6 95 62.1
BraA10t43291Z Brassica rapa HOM05D006170 ORTHO05D007794 1.2e-26 123.2 106 54.7
Oeu013861.1 Olea europaea HOM05D000359 ORTHO05D000251 3.6e-26 121.7 92 65.2
ECA236G0468 Erigeron canadensis HOM05D006170 ORTHO05D007794 4.7e-26 121.3 103 57.3
HPP92_000867 Vanilla planifolia HOM05D006170 ORTHO05D007794 2.4e-25 119.0 91 58.2
Nitab4.5_0000397g0160 Nicotiana tabacum HOM05D006170 ORTHO05D007794 1.5e-24 116.3 113 51.3
unitig_37.g12585 Utricularia gibba HOM05D006170 ORTHO05D007794 2.0e-24 115.9 107 54.2
HanXRQChr11g0332711 Helianthus annuus HOM05D006170 ORTHO05D007794 2.6e-24 115.5 106 54.7
Migut.M01817 Erythranthe guttata HOM05D006170 ORTHO05D007794 3.8e-23 111.7 113 54.0
SGA_v2.0_scaffold34G13954 Striga asiatica HOM05D000141 ORTHO05D001968 3.8e-23 111.7 108 50.0
CDE05G1194 Ceratophyllum demersum HOM05D006170 ORTHO05D007794 5.4e-22 107.8 107 53.3
Os05g0500500 Oryza sativa ssp. japonica HOM05D006170 ORTHO05D007794 2.1e-21 105.9 108 47.2
Ah.04g165500 Amaranthus hybridus HOM05D006170 ORTHO05D007794 1.1e-19 100.1 90 52.2
Sopen07g032160 Solanum pennellii HOM05D006170 ORTHO05D007794 4.3e-19 98.2 74 59.5
Zm00001eb291920 Zea mays HOM05D006170 ORTHO05D007794 7.3e-19 97.4 90 51.1
Zm00001eb352720 Zea mays HOM05D006170 ORTHO05D007794 2.8e-18 95.5 88 53.4
SalBow7G2464 Salvia bowleyana HOM05D006170 ORTHO05D007794 4.8e-18 94.7 109 45.9
ATR1088G045 Amborella trichopoda HOM05D006170 ORTHO05D007794 1.6e-10 69.7 56 57.1
SEGI_04384 Sequoiadendron giganteum HOM05D006170 ORTHO05D000001 4.8e-10 68.2 79 39.2
Nitab4.5_0000104g0260 Nicotiana tabacum HOM05D006170 ORTHO05D007794 1.1e-09 67.0 39 71.8
SEGI_21038 Sequoiadendron giganteum HOM05D000136 ORTHO05D007794 2.9e-07 58.9 82 35.4
Prupe.4G201100 Prunus persica HOM05D006170 ORTHO05D007794 7.1e-06 54.3 35 74.3


User provided reference genes

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