Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.3171 Acer truncatum HOM05D000359 ORTHO05D000251 1.8e-126 456.1 250 100.0
Atru.chr2.3168 Acer truncatum HOM05D000359 ORTHO05D000251 2.6e-125 452.2 247 100.0
Prupe.4G201000 Prunus persica HOM05D000359 ORTHO05D000251 9.7e-40 167.9 183 49.7
MD11G1228300 Malus domestica HOM05D000359 ORTHO05D000251 1.0e-36 157.9 246 41.9
FvH4_3g21670 Fragaria vesca HOM05D000359 ORTHO05D000251 3.8e-36 156.0 180 47.8
RcHm_v2.0_Chr5g0037151 Rosa chinensis HOM05D000359 ORTHO05D000251 1.1e-35 154.5 242 39.3
QL08p013840 Quercus lobata HOM05D000359 ORTHO05D000251 2.5e-35 153.3 161 50.9
CiPaw.11G182700 Carya illinoinensis HOM05D000359 ORTHO05D000251 3.2e-35 152.9 253 43.1
Ciclev10010684m.g Citrus clementina HOM05D000359 ORTHO05D000251 1.2e-34 151.0 246 48.4
Thecc.07G055400 Theobroma cacao HOM05D000359 ORTHO05D000251 6.1e-34 148.7 165 49.1
FAN11G3509 Fragaria x ananassa HOM05D000359 ORTHO05D000251 1.0e-33 147.9 252 40.5
Haze_09590 Corylus avellana HOM05D000359 ORTHO05D000251 1.4e-33 147.5 253 41.1
FAN25G0314 Fragaria x ananassa HOM05D000359 ORTHO05D000251 3.0e-33 146.4 252 38.9
FAN16G2098 Fragaria x ananassa HOM05D000359 ORTHO05D000251 2.0e-32 143.7 256 39.5
FAN21G2111 Fragaria x ananassa HOM05D000359 ORTHO05D000251 3.3e-32 142.9 256 39.5
Duzib213G1041 Durio zibethinus HOM05D000359 ORTHO05D000251 9.7e-32 141.4 176 46.0
Potri.011G131700 Populus trichocarpa HOM05D000359 ORTHO05D000251 1.3e-31 141.0 167 47.9
Cfa020438 Carpinus fangiana HOM05D000359 ORTHO05D000251 3.7e-31 139.4 169 46.7
Duzib268G1303 Durio zibethinus HOM05D000359 ORTHO05D000251 4.1e-30 136.0 242 42.6
Manes.03G121900 Manihot esculenta HOM05D000359 ORTHO05D000251 4.1e-30 136.0 181 40.3
Potri.001G416100 Populus trichocarpa HOM05D000359 ORTHO05D000251 5.3e-30 135.6 165 47.3
Gorai.004G028300 Gossypium raimondii HOM05D000359 ORTHO05D000251 7.0e-30 135.2 183 44.8
Sabra11G0118700 Salix brachista HOM05D000359 ORTHO05D000251 7.0e-30 135.2 254 41.3
Sabra16G0282700 Salix brachista HOM05D000359 ORTHO05D000251 9.1e-30 134.8 133 51.1
Gohir.A08G020008 Gossypium hirsutum HOM05D000359 ORTHO05D000251 1.2e-29 134.4 183 45.9
Gohir.D08G030700 Gossypium hirsutum HOM05D000359 ORTHO05D000251 2.0e-29 133.7 183 44.3
COL.COLO4_09553 Corchorus olitorius HOM05D000359 ORTHO05D000251 3.5e-29 132.9 163 47.2
Manes.15G077600 Manihot esculenta HOM05D000359 ORTHO05D000251 1.0e-28 131.3 183 41.5
MD03G1213400 Malus domestica HOM05D000359 ORTHO05D000251 2.9e-28 129.8 243 39.1
Dinv03945 Davidia involucrata HOM05D000359 ORTHO05D000251 1.1e-27 127.9 252 38.1
TWI39G0270 Tripterygium wilfordii HOM05D000359 ORTHO05D000251 1.1e-27 127.9 252 35.7
TWI38G0242 Tripterygium wilfordii HOM05D000359 ORTHO05D000251 7.2e-27 125.2 171 41.5
Gohir.D05G364800 Gossypium hirsutum HOM05D000359 ORTHO05D000251 1.2e-26 124.4 177 43.5
TAR627G0843 Trochodendron aralioides HOM05D000359 ORTHO05D000251 4.4e-24 115.9 175 38.9
Dinv22316 Davidia involucrata HOM05D000359 ORTHO05D000251 2.8e-23 113.2 237 36.3
Gohir.D13G146600 Gossypium hirsutum HOM05D000359 ORTHO05D000251 3.7e-23 112.8 167 40.1
Gorai.013G164400 Gossypium raimondii HOM05D000359 ORTHO05D000251 3.7e-23 112.8 167 40.1
TAR629G0800 Trochodendron aralioides HOM05D000359 ORTHO05D000251 3.7e-23 112.8 250 36.0
Gohir.A13G141900 Gossypium hirsutum HOM05D000359 ORTHO05D000251 1.1e-22 111.3 167 40.1
Eucgr.F01000 Eucalyptus grandis HOM05D000359 ORTHO05D000251 4.1e-22 109.4 180 38.3
TAR624G0422 Trochodendron aralioides HOM05D000359 ORTHO05D000251 7.0e-22 108.6 178 38.2
Gohir.A04G022700 Gossypium hirsutum HOM05D000359 ORTHO05D000251 7.7e-21 105.1 143 43.4
CsaV3_3G022810 Cucumis sativus L. HOM05D000359 ORTHO05D000251 2.2e-20 103.6 172 36.6
CANSAT11G0182 Cannabis sativa HOM05D000359 ORTHO05D000251 5.0e-20 102.4 170 35.3
ClCG05G014870 Citrullus lanatus HOM05D000359 ORTHO05D000251 8.5e-20 101.7 176 35.8
Gorai.009G427600 Gossypium raimondii HOM05D000359 ORTHO05D000251 8.5e-20 101.7 143 42.7
MELO3C018134.2 Cucumis melo HOM05D000359 ORTHO05D000251 5.5e-19 99.0 181 34.8
Glyma.12G215400 Glycine max HOM05D000359 ORTHO05D000251 9.4e-19 98.2 166 38.0
Hma1.2p1_1054F.1_g252480 Hydrangea macrophylla HOM05D000359 ORTHO05D000251 1.2e-18 97.8 246 37.4
Glyma.13G286100 Glycine max HOM05D000359 ORTHO05D000251 3.0e-17 93.2 173 34.7
Lalb_Chr24g0400321 Lupinus albus HOM05D000359 ORTHO05D000251 5.2e-17 92.4 169 36.7
Phvul.005G090500 Phaseolus vulgaris HOM05D000359 ORTHO05D000251 6.8e-17 92.0 173 35.8
Medtr2g082190 Medicago truncatula HOM05D000359 ORTHO05D000251 8.8e-17 91.7 127 40.9
GSVIVG01030643001 Vitis vinifera HOM05D000359 ORTHO05D000251 2.0e-16 90.5 180 33.3
Sed0027510 Sechium edule HOM05D000359 ORTHO05D000251 7.5e-16 88.6 159 35.8
Lj3g0019152 Lotus japonicus HOM05D000359 ORTHO05D000251 2.8e-15 86.7 176 34.1
Actinidia09954 Actinidia chinensis HOM05D000359 ORTHO05D000251 6.3e-15 85.5 248 29.8
Nn1g03724 Nelumbo nucifera HOM05D000359 ORTHO05D000251 6.3e-15 85.5 239 33.9
Lj3g0022499 Lotus japonicus HOM05D000359 ORTHO05D000251 8.3e-15 85.1 146 39.0
MD17G1091400 Malus domestica HOM05D000359 ORTHO05D000251 1.1e-14 84.7 160 32.5
Lj8C165G16 Lonicera japonica HOM05D000359 ORTHO05D000251 1.8e-14 84.0 253 31.2
Oeu013861.1 Olea europaea HOM05D000359 ORTHO05D000251 2.4e-14 83.6 124 38.7
Oeu062623.1 Olea europaea HOM05D000359 ORTHO05D000251 3.1e-14 83.2 259 31.3
Sed0017315 Sechium edule HOM05D000359 ORTHO05D000251 5.4e-14 82.4 172 32.0
VMungo1080G0375 Vigna mungo HOM05D000359 ORTHO05D000251 7.0e-14 82.0 154 35.1
CSS0025934 Camellia sinensis var. sinensis HOM05D000359 ORTHO05D000251 1.2e-13 81.3 250 34.8
Phvul.011G141900 Phaseolus vulgaris HOM05D000359 ORTHO05D000251 1.2e-13 81.3 254 35.4
MD09G1103500 Malus domestica HOM05D000359 ORTHO05D000251 2.0e-13 80.5 166 32.5
Nn1g06946 Nelumbo nucifera HOM05D000359 ORTHO05D000251 3.5e-13 79.7 174 35.1
Lalb_Chr22g0357131 Lupinus albus HOM05D000359 ORTHO05D000251 4.5e-13 79.3 168 33.9
Prupe.3G222000 Prunus persica HOM05D000359 ORTHO05D000251 4.5e-13 79.3 176 32.4
PGR083G1534 Punica granatum HOM05D000359 ORTHO05D000251 7.7e-13 78.6 258 27.9
Nitab4.5_0000397g0130 Nicotiana tabacum HOM05D000359 ORTHO05D000251 1.3e-12 77.8 158 34.2
Psat5g289840 Pisum sativum HOM05D000359 ORTHO05D000251 1.3e-12 77.8 129 34.9
THA.LOC104799887 Tarenaya hassleriana HOM05D000359 ORTHO05D000251 1.7e-12 77.4 163 31.3
arahy.Tifrunner.gnm1.ann1.W0I3S7 Arachis hypogaea HOM05D000359 ORTHO05D000251 2.3e-12 77.0 155 34.8
QL08p034073 Quercus lobata HOM05D000359 ORTHO05D000251 3.8e-12 76.3 165 29.7
arahy.Tifrunner.gnm1.ann1.C1383N Arachis hypogaea HOM05D000359 ORTHO05D000251 6.5e-12 75.5 156 35.3
VMungo1127G1322 Vigna mungo HOM05D000359 ORTHO05D000251 6.5e-12 75.5 183 32.2
FAN14G2728 Fragaria x ananassa HOM05D000359 ORTHO05D000251 5.5e-11 72.4 180 33.3
FvH4_6g43690 Fragaria vesca HOM05D000359 ORTHO05D000251 9.5e-11 71.6 180 33.3
Psat7g136440 Pisum sativum HOM05D000359 ORTHO05D000251 1.6e-10 70.9 181 32.6
FAN05G5170 Fragaria x ananassa HOM05D000359 ORTHO05D000251 3.6e-10 69.7 180 31.7
FAN02G3377 Fragaria x ananassa HOM05D000359 ORTHO05D000251 1.0e-09 68.2 180 31.7
MBI18_g24146_MAGBIO Magnolia biondii HOM05D000359 ORTHO05D000251 1.0e-09 68.2 131 34.4
FAN09G3736 Fragaria x ananassa HOM05D000359 ORTHO05D000251 1.4e-09 67.8 180 32.8
Lalb_Chr03g0030171 Lupinus albus HOM05D000359 ORTHO05D000251 1.4e-09 67.8 186 33.3
vmacro11773 Vaccinium macrocarpon HOM05D000359 ORTHO05D000251 3.0e-09 66.6 170 32.9
Aqoxy4G02131 Aquilegia oxysepala HOM05D000359 ORTHO05D000251 4.0e-09 66.2 271 28.4
Oeu007615.3 Olea europaea HOM05D006170 ORTHO05D007794 4.0e-09 66.2 80 37.5
PGSC0003DMG400019229 Solanum tuberosum HOM05D000359 ORTHO05D000251 4.0e-09 66.2 125 33.6
Aqoxy1G03816 Aquilegia oxysepala HOM05D000359 ORTHO05D000251 5.2e-09 65.9 166 29.5
Migut.H01866 Erythranthe guttata HOM05D000359 ORTHO05D000251 8.8e-09 65.1 183 29.0
Sopen07g032150 Solanum pennellii HOM05D000359 ORTHO05D000251 8.8e-09 65.1 89 38.2
Cfa014453 Carpinus fangiana HOM05D000359 ORTHO05D000251 2.6e-08 63.5 211 29.9
RcHm_v2.0_Chr2g0160331 Rosa chinensis HOM05D000359 ORTHO05D000251 2.6e-08 63.5 218 30.3
SalBow7G1495 Salvia bowleyana HOM05D000359 ORTHO05D000251 2.6e-08 63.5 159 30.2
Solyc07g064010.3 Solanum lycopersicum HOM05D000359 ORTHO05D000251 2.6e-08 63.5 141 33.3
CSS0007145 Camellia sinensis var. sinensis HOM05D000359 ORTHO05D028371 3.4e-08 63.2 170 32.4
Hund23321 Selenicereus undatus HOM05D000359 ORTHO05D000251 3.4e-08 63.2 184 31.0
Sc07g0002620 Simmondsia chinensis HOM05D000359 ORTHO05D000251 3.4e-08 63.2 163 33.7
Aa31LG3G10580 Aethionema arabicum HOM05D000359 ORTHO05D000251 4.4e-08 62.8 162 28.4
EL10Ac4g07991 Beta vulgaris HOM05D000359 ORTHO05D000251 4.4e-08 62.8 241 27.0
MSTRG.15169 Avicennia marina HOM05D000359 ORTHO05D000251 9.8e-08 61.6 240 28.8
Nitab4.5_0002238g0040 Nicotiana tabacum HOM05D000359 ORTHO05D000251 9.8e-08 61.6 102 37.3
CAN.G1110.15 Capsicum annuum HOM05D000359 ORTHO05D000251 2.2e-07 60.5 125 31.2
Lj1C862G16 Lonicera japonica HOM05D000359 ORTHO05D000251 2.2e-07 60.5 132 31.8
Nitab4.5_0002342g0130 Nicotiana tabacum HOM05D000359 ORTHO05D000251 2.2e-07 60.5 132 31.8
Peaxi162Scf00257g00111 Petunia axillaris HOM05D000359 ORTHO05D000251 2.2e-07 60.5 199 29.1
Sc16g0006570 Simmondsia chinensis HOM05D000359 ORTHO05D000251 2.2e-07 60.5 170 27.6
Ah.04g165490 Amaranthus hybridus HOM05D000359 ORTHO05D000251 2.8e-07 60.1 204 27.0
AL8G30100 Arabidopsis lyrata HOM05D000359 ORTHO05D000251 2.8e-07 60.1 177 29.4
CiPaw.03G164000 Carya illinoinensis HOM05D000359 ORTHO05D000251 2.8e-07 60.1 205 27.8
Eucgr.A01735 Eucalyptus grandis HOM05D000359 ORTHO05D000251 4.9e-07 59.3 167 29.9
Thhalv10012631m.g Eutrema salsugineum HOM05D000359 ORTHO05D000251 6.3e-07 58.9 166 28.9
SalBow8G4500 Salvia bowleyana HOM05D000359 ORTHO05D000251 6.3e-07 58.9 159 29.6
CiPaw.04G118700 Carya illinoinensis HOM05D000359 ORTHO05D000251 8.3e-07 58.5 212 27.4
Lsat_1_v5_gn_5_4561 Lactuca sativa HOM05D000359 ORTHO05D000251 1.1e-06 58.2 182 25.8
Peaxi162Scf01086g00029 Petunia axillaris HOM05D000359 ORTHO05D000251 1.1e-06 58.2 118 33.1
Hund02145 Selenicereus undatus HOM05D000359 ORTHO05D000251 1.1e-06 58.2 113 31.0
Ah.06g183120 Amaranthus hybridus HOM05D000359 ORTHO05D000251 1.8e-06 57.4 176 26.1
SalBow1G4852 Salvia bowleyana HOM05D000359 ORTHO05D000251 1.8e-06 57.4 160 28.8
Lalb_Chr01g0006221 Lupinus albus HOM05D000359 ORTHO05D000251 3.1e-06 56.6 236 29.7
unitig_52.g17360 Utricularia gibba HOM05D000359 ORTHO05D000251 3.1e-06 56.6 170 27.6
MSTRG.12293 Avicennia marina HOM05D000359 ORTHO05D000251 4.1e-06 56.2 199 29.1
Nitab4.5_0002229g0120 Nicotiana tabacum HOM05D000359 ORTHO05D000251 4.1e-06 56.2 88 36.4


User provided reference genes

Program Settings