Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 5.0e-46 187.6 105 100.0
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 6.3e-25 117.5 105 70.5
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 1.2e-23 113.2 64 93.8
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 8.5e-22 107.1 98 64.3
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 8.5e-22 107.1 98 64.3
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 1.1e-21 106.7 100 61.0
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 1.1e-21 106.7 100 61.0
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 1.5e-21 106.3 98 63.3
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 1.5e-21 106.3 99 66.7
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 1.5e-21 106.3 100 62.0
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 2.5e-21 105.5 98 63.3
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 2.5e-21 105.5 100 62.0
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 2.5e-21 105.5 97 64.9
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 3.2e-21 105.1 101 64.4
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 4.2e-21 104.8 99 62.6
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 4.2e-21 104.8 99 62.6
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 4.2e-21 104.8 99 62.6
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 4.2e-21 104.8 99 62.6
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 4.2e-21 104.8 99 62.6
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 4.2e-21 104.8 100 62.0
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 4.2e-21 104.8 101 63.4
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 5.5e-21 104.4 98 63.3
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 5.5e-21 104.4 97 62.9
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 7.2e-21 104.0 100 60.0
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 7.2e-21 104.0 98 62.2
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 7.2e-21 104.0 99 61.6
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 7.2e-21 104.0 98 61.2
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 9.4e-21 103.6 101 62.4
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 9.4e-21 103.6 98 61.2
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 1.2e-20 103.2 98 62.2
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 1.2e-20 103.2 100 60.0
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 1.2e-20 103.2 100 60.0
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 1.2e-20 103.2 101 62.4
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 1.6e-20 102.8 99 60.6
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 2.1e-20 102.4 97 62.9
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 2.1e-20 102.4 97 60.8
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 2.1e-20 102.4 98 62.2
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 2.7e-20 102.1 101 62.4
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 2.7e-20 102.1 97 61.9
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 2.7e-20 102.1 97 61.9
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 2.7e-20 102.1 100 60.0
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 3.6e-20 101.7 102 57.8
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 4.7e-20 101.3 99 59.6
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 4.7e-20 101.3 99 59.6
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 4.7e-20 101.3 99 59.6
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 4.7e-20 101.3 99 59.6
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 4.7e-20 101.3 97 60.8
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 4.7e-20 101.3 101 60.4
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 6.1e-20 100.9 98 61.2
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 8.0e-20 100.5 100 62.0
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 8.0e-20 100.5 99 62.6
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 8.0e-20 100.5 98 61.2
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 8.0e-20 100.5 100 62.0
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 1.0e-19 100.1 100 62.0
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 1.0e-19 100.1 100 63.0
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 1.0e-19 100.1 97 59.8
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 1.0e-19 100.1 97 59.8
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 1.4e-19 99.8 97 60.8
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 1.8e-19 99.4 100 61.0
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 1.8e-19 99.4 98 59.2
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 1.8e-19 99.4 97 59.8
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.3e-19 99.0 98 59.2
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 3.0e-19 98.6 101 63.4
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 4.0e-19 98.2 98 58.2
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 4.0e-19 98.2 98 57.1
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 4.0e-19 98.2 97 57.7
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 4.0e-19 98.2 100 57.0
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 6.8e-19 97.4 109 54.1
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 6.8e-19 97.4 115 54.8
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 6.8e-19 97.4 101 59.4
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 6.8e-19 97.4 101 59.4
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 8.8e-19 97.1 98 57.1
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 8.8e-19 97.1 98 58.2
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 8.8e-19 97.1 98 57.1
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 8.8e-19 97.1 101 62.4
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 8.8e-19 97.1 98 59.2
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 1.2e-18 96.7 98 56.1
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 2.0e-18 95.9 97 59.8
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 2.0e-18 95.9 104 60.6
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 2.6e-18 95.5 100 59.0
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 2.6e-18 95.5 100 57.0
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 3.4e-18 95.1 100 55.0
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 4.4e-18 94.7 98 54.1
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 5.7e-18 94.4 100 63.0
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 5.7e-18 94.4 104 55.8
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 7.5e-18 94.0 96 59.4
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 9.8e-18 93.6 116 50.9
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 9.8e-18 93.6 100 56.0
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 1.7e-17 92.8 94 59.6
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 2.2e-17 92.4 100 54.0
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 2.2e-17 92.4 97 56.7
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 2.2e-17 92.4 99 56.6
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 4.8e-17 91.3 98 58.2
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 4.8e-17 91.3 97 52.6
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 8.3e-17 90.5 97 54.6
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 8.3e-17 90.5 95 57.9
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 1.1e-16 90.1 100 58.0
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 2.4e-16 89.0 113 51.3
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 4.1e-16 88.2 98 56.1
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 5.4e-16 87.8 99 52.5
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 5.4e-16 87.8 98 52.0
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 7.0e-16 87.4 97 54.6
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 1.6e-15 86.3 105 51.4
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 1.3e-14 83.2 96 50.0
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 1.7e-14 82.8 98 49.0
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 2.9e-14 82.0 97 50.5
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 2.9e-14 82.0 134 43.3
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 1.1e-13 80.1 75 61.3
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 1.5e-13 79.7 97 49.5
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 5.5e-13 77.8 98 52.0
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.2e-12 76.6 69 63.8
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 1.2e-12 76.6 98 49.0
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 1.6e-12 76.3 94 53.2
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 2.1e-12 75.9 111 43.2
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 4.7e-12 74.7 104 49.0
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 1.0e-11 73.6 104 48.1
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 5.2e-11 71.2 98 43.9
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 1.5e-10 69.7 114 41.2
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 5.7e-10 67.8 115 40.9
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 9.8e-10 67.0 44 81.8
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 1.3e-09 66.6 115 39.1
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 2.8e-09 65.5 40 77.5
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 2.8e-09 65.5 100 43.0
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 4.9e-09 64.7 115 40.0
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 5.4e-08 61.2 40 72.5
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 5.9e-07 57.8 80 45.0
C07p55210 Brassica napus HOM05D005878 ORTHO05D033170 7.7e-07 57.4 45 73.3
BolC7t45992H Brassica oleracea HOM05D005878 ORTHO05D033170 8.6e-06 53.9 45 71.1


User provided reference genes

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