Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.2829 Acer truncatum HOM05D008538 ORTHO05D010142 4.9e-73 277.7 142 100.0
Ciclev10010245m.g Citrus clementina HOM05D008538 ORTHO05D010142 9.4e-24 114.0 143 54.5
FvH4_3g20870 Fragaria vesca HOM05D008538 ORTHO05D010142 6.8e-22 107.8 136 48.5
FAN11G3526 Fragaria x ananassa HOM05D008538 ORTHO05D010142 6.8e-22 107.8 136 48.5
TWI39G0570 Tripterygium wilfordii HOM05D008538 ORTHO05D010142 1.2e-21 107.1 147 48.3
FAN21G1320 Fragaria x ananassa HOM05D008538 ORTHO05D010142 9.8e-21 104.0 136 47.1
FAN25G2351 Fragaria x ananassa HOM05D001272 ORTHO05D001843 9.8e-21 104.0 136 47.1
MD03G1219700 Malus domestica HOM05D008538 ORTHO05D010142 9.8e-21 104.0 132 50.8
Dinv08337 Davidia involucrata HOM05D008538 ORTHO05D010142 3.7e-20 102.1 132 46.2
Manes.03G116200 Manihot esculenta HOM05D008538 ORTHO05D010142 1.1e-19 100.5 141 48.2
Actinidia18751 Actinidia chinensis HOM05D008538 ORTHO05D010142 3.1e-19 99.0 139 46.0
Haze_09520 Corylus avellana HOM05D008538 ORTHO05D010142 3.1e-19 99.0 139 49.6
Prupe.4G189200 Prunus persica HOM05D008538 ORTHO05D010142 4.1e-19 98.6 138 44.2
Cfa020514 Carpinus fangiana HOM05D008538 ORTHO05D010142 2.0e-18 96.3 139 47.5
Manes.15G083500 Manihot esculenta HOM05D008538 ORTHO05D010142 5.9e-18 94.7 124 52.4
Cc05_g12630 Coffea canephora HOM05D008538 ORTHO05D010142 1.3e-17 93.6 135 44.4
Thecc.07G072500 Theobroma cacao HOM05D019219 ORTHO05D010142 5.0e-17 91.7 147 43.5
CSS0013852 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 6.5e-17 91.3 126 48.4
CSS0046110 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 6.5e-17 91.3 126 48.4
QL08p018693 Quercus lobata HOM05D008538 ORTHO05D010142 6.5e-17 91.3 142 45.1
Hma1.2p1_1003F.1_g246760 Hydrangea macrophylla HOM05D008538 ORTHO05D010142 8.6e-17 90.9 138 44.9
Cpa.g.sc80.108 Carica papaya HOM05D008538 ORTHO05D010142 1.9e-16 89.7 115 52.2
QL93p2023_0080 Quercus lobata HOM05D008538 ORTHO05D010142 2.8e-15 85.9 141 44.0
Duzib268G1845 Durio zibethinus HOM05D019219 ORTHO05D010142 1.4e-14 83.6 138 40.6
TPR.G33280 Trifolium pratense HOM05D011644 ORTHO05D010142 3.0e-14 82.4 129 44.2
Nitab4.5_0000207g0250 Nicotiana tabacum HOM05D008538 ORTHO05D010142 9.8e-13 77.4 142 43.0
PGSC0003DMG400025004 Solanum tuberosum HOM05D008538 ORTHO05D010142 9.8e-13 77.4 135 40.7
Lsat_1_v5_gn_5_6940 Lactuca sativa HOM05D008538 ORTHO05D010142 4.9e-12 75.1 132 38.6
Gohir.A11G283900 Gossypium hirsutum HOM05D019219 ORTHO05D010142 7.0e-11 71.2 122 36.9
ClCG10G006550 Citrullus lanatus HOM05D008538 ORTHO05D010142 2.0e-10 69.7 124 39.5
Psat4g132160 Pisum sativum HOM05D011644 ORTHO05D010142 2.0e-10 69.7 128 39.8
Ciclev10010289m.g Citrus clementina HOM05D019219 ORTHO05D010142 2.7e-10 69.3 81 53.1
MELO3C016550.2 Cucumis melo HOM05D008538 ORTHO05D010142 2.7e-10 69.3 128 39.8
Nitab4.5_0000662g0010 Nicotiana tabacum HOM05D008538 ORTHO05D010142 7.8e-10 67.8 143 36.4
Nitab4.5_0005141g0010 Nicotiana tabacum HOM05D008538 ORTHO05D010142 7.8e-10 67.8 143 36.4
ECA246G3043 Erigeron canadensis HOM05D008538 ORTHO05D010142 1.0e-09 67.4 135 37.8
VMungo1127G1310 Vigna mungo HOM05D011644 ORTHO05D010142 1.0e-09 67.4 146 37.0
COL.COLO4_09473 Corchorus olitorius HOM05D019219 ORTHO05D010142 1.3e-09 67.0 123 39.8
CAN.G1320.13 Capsicum annuum HOM05D008538 ORTHO05D010142 1.7e-09 66.6 133 37.6
CsaV3_3G006000 Cucumis sativus L. HOM05D008538 ORTHO05D010142 1.7e-09 66.6 136 40.4
Gohir.D11G294900 Gossypium hirsutum HOM05D019219 ORTHO05D010142 3.8e-09 65.5 121 37.2
Gorai.007G318300 Gossypium raimondii HOM05D019219 ORTHO05D010142 3.8e-09 65.5 121 37.2
MSTRG.6852 Avicennia marina HOM05D008538 ORTHO05D010142 5.0e-09 65.1 118 44.1
Glyma.06G253800 Glycine max HOM05D011644 ORTHO05D010142 6.6e-09 64.7 124 39.5
Sopen12g006890 Solanum pennellii HOM05D008538 ORTHO05D010142 6.6e-09 64.7 133 36.8
Glyma.12G147600 Glycine max HOM05D011644 ORTHO05D010142 1.5e-08 63.5 124 41.1
PGSC0003DMG403008565 Solanum tuberosum HOM05D008538 ORTHO05D010142 1.5e-08 63.5 133 36.1
Phvul.011G154700 Phaseolus vulgaris HOM05D011644 ORTHO05D010142 1.9e-08 63.2 146 34.9
Solyc12g013540.2 Solanum lycopersicum HOM05D008538 ORTHO05D010142 1.9e-08 63.2 133 36.8
CANSAT11G0909 Cannabis sativa HOM05D008538 ORTHO05D010142 9.5e-08 60.8 168 36.9
Medtr8g469260 Medicago truncatula HOM05D011644 ORTHO05D010142 9.5e-08 60.8 128 39.1
Peaxi162Scf00000g00508 Petunia axillaris HOM05D008538 ORTHO05D010142 1.2e-07 60.5 117 40.2
Sed0026392 Sechium edule HOM05D008538 ORTHO05D010142 1.2e-07 60.5 124 40.3
Hund28861 Selenicereus undatus HOM05D024071 ORTHO05D023383 2.1e-07 59.7 139 40.3
Hund28864 Selenicereus undatus HOM05D024071 ORTHO05D023383 2.1e-07 59.7 139 40.3
Lalb_Chr19g0134471 Lupinus albus HOM05D011644 ORTHO05D010142 2.8e-07 59.3 133 34.6
Lj3g0010461 Lotus japonicus HOM05D011644 ORTHO05D010142 6.1e-07 58.2 126 40.5
vmacro09554 Vaccinium macrocarpon HOM05D008538 ORTHO05D010142 2.3e-06 56.2 99 43.4
Eucgr.D01016 Eucalyptus grandis HOM05D008538 ORTHO05D010142 8.9e-06 54.3 131 35.9


User provided reference genes

Program Settings