Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.2728 Acer truncatum HOM05D005439 ORTHO05D006793 2.2e-73 278.9 141 100.0
Atru.chr2.2729 Acer truncatum HOM05D005439 ORTHO05D006793 2.2e-73 278.9 141 100.0
Gohir.A11G282786 Gossypium hirsutum HOM05D005439 ORTHO05D006793 6.9e-35 151.0 145 57.9
Gohir.D13G039100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.0e-34 149.4 128 62.5
Gohir.D11G296600 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.6e-34 147.5 128 61.7
Gorai.007G319700 Gossypium raimondii HOM05D005439 ORTHO05D006793 7.6e-34 147.5 128 61.7
Gohir.D11G168400 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.0e-33 147.1 128 61.7
Gohir.A08G188900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.3e-33 146.7 128 61.7
Gohir.D08G040300 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.3e-33 146.7 128 61.7
Gohir.D10G173200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.3e-33 146.7 128 61.7
Thecc.07G077600 Theobroma cacao HOM05D005439 ORTHO05D006793 2.9e-33 145.6 147 57.1
Gohir.A05G386100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 3.8e-33 145.2 128 60.9
Duzib170G0676 Durio zibethinus HOM05D005439 ORTHO05D006793 5.0e-33 144.8 147 55.8
Gohir.A08G058200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.1e-32 143.7 128 60.9
CSS0022813 Camellia sinensis var. sinensis HOM05D005439 ORTHO05D006793 2.5e-32 142.5 132 56.8
Actinidia01110 Actinidia chinensis HOM05D005439 ORTHO05D006793 3.2e-32 142.1 138 56.5
TWI15G0142 Tripterygium wilfordii HOM05D005439 ORTHO05D006793 3.2e-32 142.1 123 59.3
CAN.G162.72 Capsicum annuum HOM05D005439 ORTHO05D006793 4.2e-32 141.7 125 56.8
Manes.15G085800 Manihot esculenta HOM05D005439 ORTHO05D006793 9.3e-32 140.6 134 58.2
Peaxi162Scf00998g00023 Petunia axillaris HOM05D005439 ORTHO05D006793 9.3e-32 140.6 129 55.8
TAR626G0706 Trochodendron aralioides HOM05D005439 ORTHO05D006793 9.3e-32 140.6 122 59.0
Gohir.A11G204100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.6e-31 139.8 135 58.5
CiPaw.12G120500 Carya illinoinensis HOM05D005439 ORTHO05D006793 2.1e-31 139.4 137 55.5
PGSC0003DMG400001562 Solanum tuberosum HOM05D005439 ORTHO05D006793 2.1e-31 139.4 126 56.3
Gorai.010G125600 Gossypium raimondii HOM05D005439 ORTHO05D006793 2.7e-31 139.0 128 60.2
Rhsim04G0164900 Rhododendron simsii HOM05D005439 ORTHO05D006793 2.7e-31 139.0 144 54.2
Sopen07g031460 Solanum pennellii HOM05D005439 ORTHO05D006793 2.7e-31 139.0 138 53.6
Nitab4.5_0003769g0120 Nicotiana tabacum HOM05D005439 ORTHO05D006793 4.6e-31 138.3 128 54.7
CiPaw.08G146000 Carya illinoinensis HOM05D005439 ORTHO05D006793 7.9e-31 137.5 137 54.7
Gorai.013G039600 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.3e-30 136.7 128 59.4
Gorai.013G217100 Gossypium raimondii HOM05D005439 ORTHO05D006793 2.3e-30 136.0 128 59.4
PGSC0003DMG400012454 Solanum tuberosum HOM05D005439 ORTHO05D006793 2.3e-30 136.0 138 52.2
Dinv04318 Davidia involucrata HOM05D005439 ORTHO05D006793 5.1e-30 134.8 136 55.9
Cpa.g.sc53.123 Carica papaya HOM05D005439 ORTHO05D006793 6.7e-30 134.4 124 60.5
vmacro08610 Vaccinium macrocarpon HOM05D005439 ORTHO05D006793 8.7e-30 134.0 146 52.7
COL.COLO4_09427 Corchorus olitorius HOM05D005439 ORTHO05D006793 1.1e-29 133.7 123 60.2
TAR624G0176 Trochodendron aralioides HOM05D005439 ORTHO05D006793 1.5e-29 133.3 111 60.4
Gorai.012G015600 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.9e-29 132.9 128 57.8
GSVIVG01014379001 Vitis vinifera HOM05D005439 ORTHO05D006793 4.3e-29 131.7 135 53.3
Aqoxy1G02538 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 1.3e-28 130.2 124 56.5
RcHm_v2.0_Chr5g0034441 Rosa chinensis HOM05D005439 ORTHO05D006793 1.3e-28 130.2 128 53.1
Cc04_g05330 Coffea canephora HOM05D005439 ORTHO05D006793 2.2e-28 129.4 137 51.1
Oeu037221.1 Olea europaea HOM05D005439 ORTHO05D006793 2.8e-28 129.0 134 55.2
Prupe.4G185100 Prunus persica HOM05D005439 ORTHO05D006793 2.8e-28 129.0 139 51.1
Sabra11G0107800 Salix brachista HOM05D005439 ORTHO05D006793 2.8e-28 129.0 142 52.8
Solyc07g063290.3 Solanum lycopersicum HOM05D005439 ORTHO05D006793 4.8e-28 128.3 138 52.2
Gohir.A03G006900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 8.2e-28 127.5 111 61.3
PSO675G4650 Papaver somniferum HOM05D005439 ORTHO05D006793 1.1e-27 127.1 134 50.7
Lsat_1_v5_gn_9_97181 Lactuca sativa HOM05D005439 ORTHO05D006793 1.4e-27 126.7 123 53.7
Aqoxy6G01973 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 1.8e-27 126.3 124 56.5
CANSAT80G2923 Cannabis sativa HOM05D005439 ORTHO05D006793 1.8e-27 126.3 139 49.6
MD03G1224300 Malus domestica HOM05D005439 ORTHO05D006793 2.4e-27 125.9 113 55.8
Potri.011G121800 Populus trichocarpa HOM05D005439 ORTHO05D006793 2.4e-27 125.9 137 51.8
ECA240G1812 Erigeron canadensis HOM05D005439 ORTHO05D006793 3.1e-27 125.6 136 51.5
Eucgr.I00444 Eucalyptus grandis HOM05D005439 ORTHO05D006793 3.1e-27 125.6 134 50.0
DCAR_000742 Daucus carota HOM05D005439 ORTHO05D006793 3.4e-26 122.1 114 57.9
HanXRQChr04g0095481 Helianthus annuus HOM05D005439 ORTHO05D006793 3.4e-26 122.1 112 56.2
Haze_09469 Corylus avellana HOM05D005439 ORTHO05D006793 5.9e-26 121.3 145 49.7
Dinv30229 Davidia involucrata HOM05D005439 ORTHO05D006793 5.9e-26 121.3 113 56.6
Lsat_1_v5_gn_9_97261 Lactuca sativa HOM05D005439 ORTHO05D006793 5.9e-26 121.3 120 52.5
Psat5g245080 Pisum sativum HOM05D005439 ORTHO05D006793 7.7e-26 120.9 146 47.9
Medtr2g079590 Medicago truncatula HOM05D005439 ORTHO05D006793 1.7e-25 119.8 135 52.6
RcHm_v2.0_Chr6g0279991 Rosa chinensis HOM05D005439 ORTHO05D006793 3.8e-25 118.6 139 47.5
TPR.G16054 Trifolium pratense HOM05D005439 ORTHO05D006793 3.8e-25 118.6 128 52.3
Glyma.13G278900 Glycine max HOM05D005439 ORTHO05D006793 6.5e-25 117.9 133 51.9
Lalb_Chr20g0109751 Lupinus albus HOM05D005439 ORTHO05D006793 2.5e-24 115.9 137 48.9
Nn1g04026 Nelumbo nucifera HOM05D005439 ORTHO05D006793 4.2e-24 115.2 158 47.5
ATR0019G055 Amborella trichopoda HOM05D005439 ORTHO05D006793 5.5e-24 114.8 125 51.2
Sc18g0002800 Simmondsia chinensis HOM05D005439 ORTHO05D006793 7.2e-24 114.4 127 49.6
AUR62034281 Chenopodium quinoa HOM05D005439 ORTHO05D006793 2.1e-23 112.8 127 49.6
Gohir.D09G236700 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.0e-22 110.5 84 69.0
EL10Ac4g09544 Beta vulgaris HOM05D005439 ORTHO05D006793 3.0e-22 109.0 147 44.9
Lj3g0027158 Lotus japonicus HOM05D005439 ORTHO05D006793 3.9e-22 108.6 135 45.9
Ciclev10009838m.g Citrus clementina HOM05D005439 ORTHO05D006793 6.7e-22 107.8 103 59.2
Lj1g0010486 Lotus japonicus HOM05D005439 ORTHO05D006793 8.8e-22 107.5 138 46.4
arahy.Tifrunner.gnm1.ann1.5K0R4Y Arachis hypogaea HOM05D005439 ORTHO05D006793 1.1e-21 107.1 163 40.5
MBI18_g17006_MAGBIO Magnolia biondii HOM05D005439 ORTHO05D006793 1.5e-21 106.7 122 51.6
unitig_32.g11156 Utricularia gibba HOM05D005439 ORTHO05D006793 2.6e-21 105.9 122 48.4
AT3G15420 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 3.3e-21 105.5 109 49.5
Carub.0003s1515 Capsella rubella HOM05D005439 ORTHO05D006793 7.4e-21 104.4 110 49.1
FAN14G2189 Fragaria x ananassa HOM05D005439 ORTHO05D006793 9.7e-21 104.0 142 43.7
AUR62042910 Chenopodium quinoa HOM05D005439 ORTHO05D006793 1.7e-20 103.2 144 43.8
PGR031G3442 Punica granatum HOM05D005439 ORTHO05D006793 1.7e-20 103.2 122 48.4
A02p03560 Brassica napus HOM05D005439 ORTHO05D006793 2.8e-20 102.4 112 50.0
ClCG11G007090 Citrullus lanatus HOM05D005439 ORTHO05D006793 2.8e-20 102.4 112 50.9
Hund22944 Selenicereus undatus HOM05D005439 ORTHO05D006793 3.7e-20 102.1 134 45.5
BraA02t05327Z Brassica rapa HOM05D005439 ORTHO05D006793 6.3e-20 101.3 114 49.1
THA.LOC104815550 Tarenaya hassleriana HOM05D005439 ORTHO05D006793 8.2e-20 100.9 121 44.6
C02p08370 Brassica napus HOM05D005439 ORTHO05D006793 1.1e-19 100.5 132 46.2
BolC2t06755H Brassica oleracea HOM05D005439 ORTHO05D006793 1.1e-19 100.5 132 46.2
CARHR090470 Cardamine hirsuta HOM05D005439 ORTHO05D006793 1.1e-19 100.5 137 43.8
Sed0007807 Sechium edule HOM05D005439 ORTHO05D006793 1.1e-19 100.5 112 48.2
SalBow7G3564 Salvia bowleyana HOM05D005439 ORTHO05D006793 1.4e-19 100.1 122 50.0
AL3G27970 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 1.8e-19 99.8 109 45.0
Thhalv10021755m.g Eutrema salsugineum HOM05D005439 ORTHO05D006793 3.1e-19 99.0 126 45.2
Nitab4.5_0010521g0020 Nicotiana tabacum HOM05D005439 ORTHO05D006793 4.1e-19 98.6 127 44.9
C09p60700 Brassica napus HOM05D005439 ORTHO05D006793 6.9e-19 97.8 112 49.1
MELO3C008192.2 Cucumis melo HOM05D005439 ORTHO05D006793 6.9e-19 97.8 113 49.6
Gorai.007G117500 Gossypium raimondii HOM05D005439 ORTHO05D006793 6.9e-19 97.8 84 64.3
Aa31LG8G2660 Aethionema arabicum HOM05D005439 ORTHO05D006793 1.5e-18 96.7 114 45.6
AT1G80745 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 1.5e-18 96.7 127 44.9
BcaB08g36849 Brassica carinata HOM05D005439 ORTHO05D006793 2.0e-18 96.3 118 45.8
Eucgr.L03232 Eucalyptus grandis HOM05D005439 ORTHO05D006793 2.6e-18 95.9 93 53.8
Sp6g27700 Schrenkiella parvula HOM05D005439 ORTHO05D006793 2.6e-18 95.9 120 45.0
Migut.H01926 Erythranthe guttata HOM05D005439 ORTHO05D006793 7.7e-18 94.4 103 47.6
AL2G40660 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 5.0e-17 91.7 108 47.2
PSO541G3703 Papaver somniferum HOM05D005439 ORTHO05D006793 6.5e-17 91.3 93 50.5
HPP92_001754 Vanilla planifolia HOM05D005439 ORTHO05D006793 8.5e-17 90.9 116 40.5
arahy.Tifrunner.gnm1.ann1.KJ06EE Arachis hypogaea HOM05D005439 ORTHO05D006793 3.2e-16 89.0 73 61.6
Potri.001G402700 Populus trichocarpa HOM05D005439 ORTHO05D006793 4.2e-16 88.6 101 48.5
Gorai.004G187000 Gossypium raimondii HOM05D005439 ORTHO05D006793 6.1e-15 84.7 74 60.8
Os04g0530000 Oryza sativa ssp. japonica HOM05D005439 ORTHO05D006793 1.0e-14 84.0 117 43.6
QL08p019954 Quercus lobata HOM05D005439 ORTHO05D006793 1.4e-14 83.6 103 46.6
Carub.0002s2680 Capsella rubella HOM05D005439 ORTHO05D006793 3.0e-14 82.4 64 54.7
Mapoly0076s0011 Marchantia polymorpha HOM05D005439 ORTHO05D006793 3.9e-14 82.0 124 36.3
AagrBONN_evm.TU.Sc2ySwM_369.384 Anthoceros agrestis HOM05D005439 ORTHO05D006793 5.2e-14 81.6 116 42.2
Zm00001eb001470 Zea mays HOM05D005439 ORTHO05D006793 5.2e-14 81.6 125 42.4
BcaC03g18493 Brassica carinata HOM05D005439 ORTHO05D006793 2.0e-13 79.7 90 51.1
MD11G1243100 Malus domestica HOM05D005439 ORTHO05D006793 2.0e-13 79.7 100 45.0
Zm00001eb403870 Zea mays HOM05D005439 ORTHO05D006793 5.7e-13 78.2 117 41.0
Sed0010430 Sechium edule HOM05D005439 ORTHO05D006793 1.7e-12 76.6 95 45.3
RcHm_v2.0_Chr2g0143371 Rosa chinensis HOM05D005439 ORTHO05D006793 2.2e-12 76.3 78 46.2
Phvul.005G083100 Phaseolus vulgaris HOM05D005439 ORTHO05D006793 3.7e-12 75.5 122 41.0
Pp3c23_5480 Physcomitrium patens HOM05D005439 ORTHO05D006793 6.3e-12 74.7 120 37.5
CDE08G1297 Ceratophyllum demersum HOM05D005439 ORTHO05D006793 7.0e-11 71.2 75 48.0
TPR.G39010 Trifolium pratense HOM05D005439 ORTHO05D006793 4.5e-10 68.6 65 55.4
QL08p019959 Quercus lobata HOM05D005439 ORTHO05D006793 2.5e-08 62.8 57 56.1
VMungo1215G1396 Vigna mungo HOM05D005439 ORTHO05D006793 4.2e-08 62.0 91 41.8
BcaC04g18875 Brassica carinata HOM05D005439 ORTHO05D006793 9.4e-08 60.8 76 48.7
BolC9t58901H Brassica oleracea HOM05D005439 ORTHO05D006793 4.7e-07 58.5 76 47.4
FAN09G1944 Fragaria x ananassa HOM05D005439 ORTHO05D006793 3.0e-06 55.8 58 48.3
FAN02G1859 Fragaria x ananassa HOM05D005439 ORTHO05D006793 4.0e-06 55.5 58 48.3
SMO293G0007 Selaginella moellendorffii HOM05D005439 ORTHO05D006793 5.2e-06 55.1 53 49.1


User provided reference genes

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