Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.2657 Acer truncatum HOM05D009200 ORTHO05D010964 1.5e-106 389.4 188 100.0
Atru.chr11.620 Acer truncatum HOM05D009200 ORTHO05D010964 5.9e-98 360.9 207 87.0
FAN24G2747 Fragaria x ananassa HOM05D009200 ORTHO05D010964 1.6e-39 166.8 174 49.4
FAN13G0762 Fragaria x ananassa HOM05D009200 ORTHO05D010964 4.0e-38 162.2 174 48.3
FAN28G0442 Fragaria x ananassa HOM05D009200 ORTHO05D010964 8.9e-38 161.0 174 47.7
FAN04G1275 Fragaria x ananassa HOM05D009200 ORTHO05D010964 1.2e-37 160.6 181 47.5
FAN04G2696 Fragaria x ananassa HOM05D009200 ORTHO05D010964 1.2e-37 160.6 181 47.5
QL05p061375 Quercus lobata HOM05D020409 ORTHO05D010964 3.3e-32 142.5 209 38.3
QL08p047299 Quercus lobata HOM05D020409 ORTHO05D010964 4.3e-32 142.1 209 38.3
FAN04G1613 Fragaria x ananassa HOM05D009200 ORTHO05D010964 1.3e-28 130.6 117 55.6
FAN14G0856 Fragaria x ananassa HOM05D009200 ORTHO05D010964 3.8e-28 129.0 136 47.8
Atru.chr1.1625 Acer truncatum HOM05D000107 ORTHO05D000062 6.0e-26 121.7 210 32.9
FAN10G0922 Fragaria x ananassa HOM05D009200 ORTHO05D010964 9.6e-24 114.4 115 49.6
FvH4_1g24190 Fragaria vesca HOM05D009200 ORTHO05D010964 2.0e-21 106.7 131 43.5
FAN25G1343 Fragaria x ananassa HOM05D009200 ORTHO05D010964 2.6e-21 106.3 94 52.1
QL04p096916 Quercus lobata HOM05D020409 ORTHO05D010964 2.2e-20 103.2 209 31.6
QL10p004908 Quercus lobata HOM05D020409 ORTHO05D010964 8.7e-17 91.3 182 35.7
FAN19G2148 Fragaria x ananassa HOM05D009200 ORTHO05D010964 2.0e-13 80.1 115 39.1
TPR.G27572 Trifolium pratense HOM05D013784 ORTHO05D000110 2.2e-12 76.6 165 26.7
Psat2g112240 Pisum sativum HOM05D013784 ORTHO05D000110 4.9e-12 75.5 167 28.7
QL03p023387 Quercus lobata HOM05D020409 ORTHO05D010964 7.1e-11 71.6 99 33.3
RcHm_v2.0_Chr5g0079051 Rosa chinensis HOM05D009200 ORTHO05D010964 2.7e-10 69.7 56 60.7
FAN25G2235 Fragaria x ananassa HOM05D009200 ORTHO05D010964 6.0e-10 68.6 51 60.8
Lj3g0001529 Lotus japonicus HOM05D013784 ORTHO05D000110 3.0e-09 66.2 161 25.5
MD02G1315300 Malus domestica HOM05D008315 ORTHO05D009452 3.0e-09 66.2 118 33.1
DCAR_015807 Daucus carota HOM05D031250 ORTHO05D012860 5.1e-09 65.5 159 29.6
HanXRQChr13g0421391 Helianthus annuus HOM05D008711 ORTHO05D010134 1.1e-08 64.3 170 25.9
Hund13232 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.5e-08 63.9 175 23.4
TPR.G20407 Trifolium pratense HOM05D013784 ORTHO05D000110 3.3e-08 62.8 137 27.0
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 3.3e-08 62.8 162 27.2
Dinv12401 Davidia involucrata HOM05D010146 ORTHO05D000385 4.3e-08 62.4 144 27.8
TWI73G0990 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 4.3e-08 62.4 162 27.2
Lsat_1_v5_gn_1_118581 Lactuca sativa HOM05D008975 ORTHO05D010134 7.4e-08 61.6 151 27.8
Hund14804 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.3e-07 60.8 180 24.4
Lj6g0010933 Lotus japonicus HOM05D000420 ORTHO05D000110 1.6e-07 60.5 157 26.1
HanXRQChr15g0469701 Helianthus annuus HOM05D008711 ORTHO05D010134 2.8e-07 59.7 170 25.3
Hund03891 Selenicereus undatus HOM05D000420 ORTHO05D000110 2.8e-07 59.7 174 23.6
Dinv12592 Davidia involucrata HOM05D010146 ORTHO05D000385 3.7e-07 59.3 101 32.7
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.7e-07 59.3 138 27.5
HanXRQChr03g0064601 Helianthus annuus HOM05D015005 ORTHO05D000110 4.8e-07 58.9 172 25.6
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 4.8e-07 58.9 102 31.4
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.8e-07 58.9 102 31.4
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.8e-07 58.9 102 31.4
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 4.8e-07 58.9 102 31.4
Nitab4.5_0000023g0140 Nicotiana tabacum HOM05D000420 ORTHO05D000110 6.2e-07 58.5 155 27.1
MD15G1435100 Malus domestica HOM05D008595 ORTHO05D000669 1.8e-06 57.0 118 25.4
Hund08950 Selenicereus undatus HOM05D001220 ORTHO05D000110 1.8e-06 57.0 165 25.5
Hund15083 Selenicereus undatus HOM05D001220 ORTHO05D000110 2.4e-06 56.6 165 26.1
Nitab4.5_0006180g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.1e-06 56.2 134 27.6
Prupe.1G578800 Prunus persica HOM05D005763 ORTHO05D005970 3.1e-06 56.2 147 25.2
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.1e-06 56.2 102 30.4
Lj2g0025577 Lotus japonicus HOM05D000420 ORTHO05D000110 4.0e-06 55.8 173 26.6
DCAR_027889 Daucus carota HOM05D012986 ORTHO05D016269 5.3e-06 55.5 158 23.4
MD09G1027200 Malus domestica HOM05D005763 ORTHO05D005970 5.3e-06 55.5 118 25.4
TPR.G26461 Trifolium pratense HOM05D000420 ORTHO05D000110 5.3e-06 55.5 173 24.9
PSO063G3441 Papaver somniferum HOM05D001309 ORTHO05D000385 9.0e-06 54.7 140 27.9
Prupe.7G105300 Prunus persica HOM05D005763 ORTHO05D005970 9.0e-06 54.7 150 24.0
Hund15426 Selenicereus undatus HOM05D000420 ORTHO05D000110 9.0e-06 54.7 149 24.2


User provided reference genes

Program Settings