Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.2498 Acer truncatum HOM05D004761 ORTHO05D037944 7.1e-46 186.8 88 100.0
Atru.chr11.97 Acer truncatum HOM05D004761 ORTHO05D005813 1.4e-09 66.2 33 90.9
EL10Ac6g14394 Beta vulgaris HOM05D004761 ORTHO05D005813 2.4e-09 65.5 86 44.2
DCAR_023656 Daucus carota HOM05D004761 ORTHO05D005813 3.1e-09 65.1 33 87.9
Migut.E00345 Erythranthe guttata HOM05D004761 ORTHO05D005813 3.1e-09 65.1 33 87.9
Oeu003182.1 Olea europaea HOM05D004761 ORTHO05D005813 9.1e-09 63.5 36 80.6
AUR62002860 Chenopodium quinoa HOM05D004761 ORTHO05D005813 1.2e-08 63.2 32 87.5
AUR62035212 Chenopodium quinoa HOM05D004761 ORTHO05D005813 1.2e-08 63.2 32 87.5
Lsat_1_v5_gn_3_59080 Lactuca sativa HOM05D004761 ORTHO05D005813 1.2e-08 63.2 32 87.5
Aqoxy3G00293 Aquilegia oxysepala HOM05D004761 ORTHO05D005813 1.5e-08 62.8 40 72.5
HanXRQChr17g0552301 Helianthus annuus HOM05D004761 ORTHO05D005813 1.5e-08 62.8 36 80.6
ECA246G4195 Erigeron canadensis HOM05D004761 ORTHO05D005813 2.0e-08 62.4 33 84.8
HanXRQChr15g0476311 Helianthus annuus HOM05D004761 ORTHO05D005813 2.0e-08 62.4 32 87.5
Rhsim09G0107700 Rhododendron simsii HOM05D004761 ORTHO05D005813 2.0e-08 62.4 83 42.2
vmacro10560 Vaccinium macrocarpon HOM05D004761 ORTHO05D005813 2.0e-08 62.4 33 84.8
MSTRG.843 Avicennia marina HOM05D004761 ORTHO05D005813 2.6e-08 62.0 32 84.4
Eucgr.G02317 Eucalyptus grandis HOM05D004761 ORTHO05D005813 2.6e-08 62.0 32 84.4
Medtr1g110750 Medicago truncatula HOM05D004761 ORTHO05D005813 5.9e-08 60.8 32 87.5
Ah.03g137610 Amaranthus hybridus HOM05D004761 ORTHO05D005813 7.7e-08 60.5 87 43.7
CDE05G0568 Ceratophyllum demersum HOM05D004761 ORTHO05D005813 7.7e-08 60.5 33 81.8
CDE05G1514 Ceratophyllum demersum HOM05D004761 ORTHO05D005813 7.7e-08 60.5 33 81.8
MELO3C012254.2 Cucumis melo HOM05D004761 ORTHO05D005813 7.7e-08 60.5 32 84.4
CsaV3_5G034380 Cucumis sativus L. HOM05D004761 ORTHO05D005813 7.7e-08 60.5 32 84.4
Sed0020611 Sechium edule HOM05D004761 ORTHO05D005813 7.7e-08 60.5 32 84.4
Hund25060 Selenicereus undatus HOM05D004761 ORTHO05D005813 7.7e-08 60.5 36 75.0
Ah.02g127920 Amaranthus hybridus HOM05D004761 ORTHO05D005813 1.0e-07 60.1 84 41.7
arahy.Tifrunner.gnm1.ann1.8WFG9Z Arachis hypogaea HOM05D004761 ORTHO05D005813 1.0e-07 60.1 39 71.8
arahy.Tifrunner.gnm1.ann1.B0KB7I Arachis hypogaea HOM05D004761 ORTHO05D005813 1.0e-07 60.1 39 71.8
arahy.Tifrunner.gnm1.ann1.BGN30W Arachis hypogaea HOM05D004761 ORTHO05D005813 1.0e-07 60.1 39 71.8
arahy.Tifrunner.gnm1.ann1.QJ0JEK Arachis hypogaea HOM05D004761 ORTHO05D005813 1.0e-07 60.1 39 71.8
Cc11_g10100 Coffea canephora HOM05D004761 ORTHO05D005813 1.0e-07 60.1 39 69.2
Lj3C1014G6 Lonicera japonica HOM05D004761 ORTHO05D005813 1.0e-07 60.1 32 84.4
Sabra08G0091800 Salix brachista HOM05D004761 ORTHO05D005813 1.0e-07 60.1 33 81.8
BcaC04g21408 Brassica carinata HOM05D004761 ORTHO05D005813 1.3e-07 59.7 32 84.4
BcaC06g33937 Brassica carinata HOM05D004761 ORTHO05D005813 1.3e-07 59.7 32 84.4
A06p42360 Brassica napus HOM05D004761 ORTHO05D005813 1.3e-07 59.7 70 54.3
A09p25090 Brassica napus HOM05D004761 ORTHO05D005813 1.3e-07 59.7 32 84.4
C07p34980 Brassica napus HOM05D004761 ORTHO05D005813 1.3e-07 59.7 32 84.4
C09p32130 Brassica napus HOM05D004761 ORTHO05D005813 1.3e-07 59.7 32 84.4
BolC7t44030H Brassica oleracea HOM05D004761 ORTHO05D005813 1.3e-07 59.7 32 84.4
BolC9t56063H Brassica oleracea HOM05D004761 ORTHO05D005813 1.3e-07 59.7 32 84.4
BraA06t27151Z Brassica rapa HOM05D004761 ORTHO05D005813 1.3e-07 59.7 70 54.3
BraA09t38096Z Brassica rapa HOM05D004761 ORTHO05D005813 1.3e-07 59.7 32 84.4
ClCG05G022660 Citrullus lanatus HOM05D004761 ORTHO05D005813 1.3e-07 59.7 36 75.0
Glyma.20G116100 Glycine max HOM05D004761 ORTHO05D005813 1.3e-07 59.7 32 84.4
Hma1.2p1_0061F.1_g033840 Hydrangea macrophylla HOM05D004761 ORTHO05D005813 1.3e-07 59.7 32 84.4
Sp2g15160 Schrenkiella parvula HOM05D004761 ORTHO05D005813 1.3e-07 59.7 32 84.4
TAR629G2706 Trochodendron aralioides HOM05D004761 ORTHO05D005813 1.3e-07 59.7 32 84.4
VMungo0720G0616 Vigna mungo HOM05D004761 ORTHO05D005813 1.3e-07 59.7 32 84.4
Gohir.A03G147200 Gossypium hirsutum HOM05D004761 ORTHO05D005813 1.7e-07 59.3 32 81.2
Gohir.D02G170400 Gossypium hirsutum HOM05D004761 ORTHO05D005813 1.7e-07 59.3 32 81.2
Gohir.D11G344800 Gossypium hirsutum HOM05D004761 ORTHO05D005813 1.7e-07 59.3 32 81.2
Gorai.005G191400 Gossypium raimondii HOM05D004761 ORTHO05D005813 1.7e-07 59.3 32 81.2
Gorai.007G375200 Gossypium raimondii HOM05D004761 ORTHO05D005813 1.7e-07 59.3 32 81.2
Oeu056574.1 Olea europaea HOM05D004761 ORTHO05D037944 1.7e-07 59.3 31 83.9
PGR119G1215 Punica granatum HOM05D004761 ORTHO05D005813 1.7e-07 59.3 39 71.8
Thecc.02G229900 Theobroma cacao HOM05D004761 ORTHO05D005813 1.7e-07 59.3 32 81.2
CiPaw.16G065200 Carya illinoinensis HOM05D004761 ORTHO05D005813 2.2e-07 58.9 36 75.0
Haze_17489 Corylus avellana HOM05D004761 ORTHO05D005813 2.2e-07 58.9 80 41.2
Dinv21082 Davidia involucrata HOM05D004761 ORTHO05D005813 2.2e-07 58.9 32 84.4
Psat6g225000 Pisum sativum HOM05D004761 ORTHO05D005813 2.2e-07 58.9 32 84.4
Potri.008G121100 Populus trichocarpa HOM05D004761 ORTHO05D005813 2.2e-07 58.9 33 78.8
unitig_22.g5574 Utricularia gibba HOM05D004761 ORTHO05D005813 2.2e-07 58.9 32 81.2
unitig_24.g30582 Utricularia gibba HOM05D004761 ORTHO05D005813 2.2e-07 58.9 32 81.2
CSS0041255 Camellia sinensis var. sinensis HOM05D004761 ORTHO05D005813 2.9e-07 58.5 32 81.2
Cpa.g.sc1.34 Carica papaya HOM05D004761 ORTHO05D005813 2.9e-07 58.5 32 81.2
FvH4_4g27310 Fragaria vesca HOM05D004761 ORTHO05D005813 2.9e-07 58.5 36 75.0
FAN07G1541 Fragaria x ananassa HOM05D004761 ORTHO05D005813 2.9e-07 58.5 36 75.0
FAN12G1206 Fragaria x ananassa HOM05D004761 ORTHO05D005813 2.9e-07 58.5 36 75.0
FAN12G1874 Fragaria x ananassa HOM05D004761 ORTHO05D005813 2.9e-07 58.5 36 75.0
FAN22G1660 Fragaria x ananassa HOM05D004761 ORTHO05D005813 2.9e-07 58.5 36 75.0
Lj5g0002032 Lotus japonicus HOM05D004761 ORTHO05D005813 2.9e-07 58.5 32 81.2
Lalb_Chr02g0145941 Lupinus albus HOM05D004761 ORTHO05D005813 2.9e-07 58.5 32 81.2
Lalb_Chr21g0308901 Lupinus albus HOM05D004761 ORTHO05D005813 2.9e-07 58.5 32 81.2
PSO675G3483 Papaver somniferum HOM05D004761 ORTHO05D005813 2.9e-07 58.5 33 81.8
PSO717G0038 Papaver somniferum HOM05D004761 ORTHO05D005813 2.9e-07 58.5 33 81.8
Phvul.007G027600 Phaseolus vulgaris HOM05D004761 ORTHO05D005813 2.9e-07 58.5 32 81.2
TPR.G18808 Trifolium pratense HOM05D004761 ORTHO05D000002 2.9e-07 58.5 32 81.2
GSVIVG01011891001 Vitis vinifera HOM05D004761 ORTHO05D005813 2.9e-07 58.5 32 81.2
Actinidia16656 Actinidia chinensis HOM05D004761 ORTHO05D005813 3.8e-07 58.2 83 42.2
CANSAT01G0623 Cannabis sativa HOM05D004761 ORTHO05D005813 3.8e-07 58.2 32 81.2
MD13G1041400 Malus domestica HOM05D004761 ORTHO05D005813 3.8e-07 58.2 32 81.2
MD16G1042300 Malus domestica HOM05D004761 ORTHO05D005813 3.8e-07 58.2 32 81.2
Manes.14G102900 Manihot esculenta HOM05D004761 ORTHO05D005813 3.8e-07 58.2 32 81.2
Prupe.1G311800 Prunus persica HOM05D004761 ORTHO05D005813 3.8e-07 58.2 32 81.2
RcHm_v2.0_Chr4g0435111 Rosa chinensis HOM05D004761 ORTHO05D005813 3.8e-07 58.2 32 81.2
Sc11g0003470 Simmondsia chinensis HOM05D004761 ORTHO05D005813 3.8e-07 58.2 46 65.2
ATR0171G026 Amborella trichopoda HOM05D004761 ORTHO05D005813 5.0e-07 57.8 39 74.4
AL5G14580 Arabidopsis lyrata HOM05D004761 ORTHO05D005813 5.0e-07 57.8 32 81.2
BcaB07g30626 Brassica carinata HOM05D004761 ORTHO05D005813 5.0e-07 57.8 32 81.2
BcaC06g31103 Brassica carinata HOM05D004761 ORTHO05D005813 5.0e-07 57.8 32 81.2
CARHR146910 Cardamine hirsuta HOM05D004761 ORTHO05D005813 5.0e-07 57.8 32 81.2
Cfa018591 Carpinus fangiana HOM05D004761 ORTHO05D005813 5.0e-07 57.8 80 41.2
Ciclev10016274m.g Citrus clementina HOM05D004761 ORTHO05D005813 6.5e-07 57.4 32 81.2
Nn4g24161 Nelumbo nucifera HOM05D004761 ORTHO05D005813 6.5e-07 57.4 32 81.2
SGA_v2.0_scaffold170G38770 Striga asiatica HOM05D004761 ORTHO05D005813 6.5e-07 57.4 32 78.1
HPP92_009407 Vanilla planifolia HOM05D004761 ORTHO05D005813 6.5e-07 57.4 32 81.2
HPP92_009433 Vanilla planifolia HOM05D004761 ORTHO05D005813 6.5e-07 57.4 32 81.2
Peaxi162Scf00382g00825 Petunia axillaris HOM05D004761 ORTHO05D005813 8.5e-07 57.0 36 72.2
THA.LOC104825698 Tarenaya hassleriana HOM05D004761 ORTHO05D005813 8.5e-07 57.0 32 78.1
Aa31LG2G6400 Aethionema arabicum HOM05D004761 ORTHO05D005813 1.1e-06 56.6 32 81.2
AT3G25920 Arabidopsis thaliana HOM05D004761 ORTHO05D005813 1.1e-06 56.6 32 78.1
Duzib248G0790 Durio zibethinus HOM05D004761 ORTHO05D005813 1.1e-06 56.6 32 78.1
Thhalv10004759m.g Eutrema salsugineum HOM05D004761 ORTHO05D005813 1.1e-06 56.6 32 78.1
QL01p042268 Quercus lobata HOM05D004761 ORTHO05D005813 1.1e-06 56.6 36 75.0
TWI31G0637 Tripterygium wilfordii HOM05D004761 ORTHO05D005813 1.1e-06 56.6 36 72.2
TWI79G0635 Tripterygium wilfordii HOM05D004761 ORTHO05D005813 1.1e-06 56.6 36 72.2
Carub.0005s0378 Capsella rubella HOM05D004761 ORTHO05D005813 1.9e-06 55.8 32 78.1
Nitab4.5_0000791g0110 Nicotiana tabacum HOM05D004761 ORTHO05D005813 2.5e-06 55.5 36 69.4
Nitab4.5_0003373g0010 Nicotiana tabacum HOM05D004761 ORTHO05D005813 2.5e-06 55.5 36 69.4
CAN.G610.79 Capsicum annuum HOM05D004761 ORTHO05D005813 3.2e-06 55.1 39 64.1
Cre14.g612450 Chlamydomonas reinhardtii HOM05D004761 ORTHO05D005813 3.2e-06 55.1 33 72.7
Os03g0219900 Oryza sativa ssp. japonica HOM05D004761 ORTHO05D005813 4.2e-06 54.7 32 78.1
Zm00001eb008910 Zea mays HOM05D004761 ORTHO05D005813 4.2e-06 54.7 32 78.1
Nn3g17852 Nelumbo nucifera HOM05D004761 ORTHO05D005813 5.5e-06 54.3 33 72.7
Sopen05g005170 Solanum pennellii HOM05D004761 ORTHO05D005813 5.5e-06 54.3 36 66.7
PGSC0003DMG400014544 Solanum tuberosum HOM05D004761 ORTHO05D005813 5.5e-06 54.3 36 66.7
AagrBONN_evm.TU.Sc2ySwM_228.2844 Anthoceros agrestis HOM05D004761 ORTHO05D005813 7.2e-06 53.9 32 78.1
Potri.010G124301 Populus trichocarpa HOM05D004761 ORTHO05D005813 7.2e-06 53.9 32 75.0
CBR_g6324 Chara braunii HOM05D004761 ORTHO05D005813 9.4e-06 53.5 32 78.1
Mapoly0065s0007 Marchantia polymorpha HOM05D004761 ORTHO05D005813 9.4e-06 53.5 32 78.1
SEGI_01542 Sequoiadendron giganteum HOM05D004761 ORTHO05D005813 9.4e-06 53.5 32 71.9


User provided reference genes

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