Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.2419 Acer truncatum HOM05D007892 ORTHO05D009211 3.7e-212 741.9 564 100.0
Ciclev10007798m.g Citrus clementina HOM05D007892 ORTHO05D009211 6.6e-52 209.5 363 43.0
Dinv20199 Davidia involucrata HOM05D007892 ORTHO05D009211 8.6e-44 182.6 366 40.7
Thecc.07G095700 Theobroma cacao HOM05D007892 ORTHO05D009211 5.6e-43 179.9 366 38.0
Cfa020559 Carpinus fangiana HOM05D007892 ORTHO05D009211 1.6e-37 161.8 364 37.9
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 2.0e-37 161.4 366 37.2
Dinv14936 Davidia involucrata HOM05D007892 ORTHO05D009211 6.0e-37 159.8 365 38.4
Duzib213G0678 Durio zibethinus HOM05D007892 ORTHO05D009211 8.6e-36 156.0 321 39.3
COL.COLO4_36713 Corchorus olitorius HOM05D007892 ORTHO05D009211 1.2e-34 152.1 328 38.1
Duzib244G0002 Durio zibethinus HOM05D007892 ORTHO05D009211 6.2e-34 149.8 363 35.0
Duzib268G0896 Durio zibethinus HOM05D007892 ORTHO05D009211 1.1e-33 149.1 363 35.0
CiPaw.11G172000 Carya illinoinensis HOM05D007892 ORTHO05D009211 3.4e-32 144.1 387 34.9
Potri.011G115900 Populus trichocarpa HOM05D007892 ORTHO05D009211 5.8e-32 143.3 326 35.9
QL08p022727 Quercus lobata HOM05D007892 ORTHO05D009211 6.4e-31 139.8 397 32.7
Manes.15G089300 Manihot esculenta HOM05D007892 ORTHO05D009211 4.1e-30 137.1 294 37.8
Sabra11G0101600 Salix brachista HOM05D007892 ORTHO05D009211 1.2e-29 135.6 321 37.1
CSS0005747 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 2.7e-29 134.4 346 36.1
CSS0030192 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 3.5e-29 134.0 346 36.1
TWI38G1391 Tripterygium wilfordii HOM05D007892 ORTHO05D009211 1.3e-28 132.1 366 33.1
GSVIVG01014294001 Vitis vinifera HOM05D007892 ORTHO05D009211 1.2e-26 125.6 367 35.1
CANSAT56G4073 Cannabis sativa HOM05D007892 ORTHO05D009211 8.1e-26 122.9 386 32.4
TAR626G1218 Trochodendron aralioides HOM05D007892 ORTHO05D009211 1.8e-25 121.7 310 35.5
RcHm_v2.0_Chr5g0032741 Rosa chinensis HOM05D007892 ORTHO05D009211 6.8e-25 119.8 346 37.3
FAN16G1540 Fragaria x ananassa HOM05D007892 ORTHO05D009211 4.4e-24 117.1 372 34.1
MD03G1231500 Malus domestica HOM05D007892 ORTHO05D009211 1.7e-23 115.2 366 30.9
FAN11G1893 Fragaria x ananassa HOM05D007892 ORTHO05D009211 2.2e-23 114.8 374 34.0
Eucgr.F01161 Eucalyptus grandis HOM05D007892 ORTHO05D009211 4.9e-23 113.6 386 31.1
FvH4_3g19480 Fragaria vesca HOM05D007892 ORTHO05D009211 4.9e-23 113.6 375 33.3
FAN21G3246 Fragaria x ananassa HOM05D007892 ORTHO05D009211 6.4e-23 113.2 376 34.0
MD11G1252600 Malus domestica HOM05D007892 ORTHO05D009211 1.4e-22 112.1 370 32.2
FAN25G2763 Fragaria x ananassa HOM05D007892 ORTHO05D009211 7.1e-22 109.8 373 33.5
Rhsim06G0202400 Rhododendron simsii HOM05D007892 ORTHO05D009211 6.0e-21 106.7 363 31.4
Potri.001G397001 Populus trichocarpa HOM05D007892 ORTHO05D009211 7.8e-21 106.3 330 32.7
Actinidia09702 Actinidia chinensis HOM05D007892 ORTHO05D009211 6.6e-20 103.2 363 31.7
Prupe.4G176400 Prunus persica HOM05D007892 ORTHO05D009211 6.6e-20 103.2 372 31.2
Gohir.A01G061400 Gossypium hirsutum HOM05D007892 ORTHO05D009211 1.1e-19 102.4 355 31.8
Gohir.D01G048000 Gossypium hirsutum HOM05D007892 ORTHO05D009211 3.6e-18 97.4 355 31.0
Nn1g06449 Nelumbo nucifera HOM05D007892 ORTHO05D009211 1.4e-17 95.5 363 30.3
Lj1A840G45 Lonicera japonica HOM05D007892 ORTHO05D009211 2.4e-17 94.7 239 35.6
Gorai.002G067800 Gossypium raimondii HOM05D007892 ORTHO05D009211 4.0e-17 94.0 355 30.7
Lalb_Chr01g0016751 Lupinus albus HOM05D007892 ORTHO05D009211 5.2e-17 93.6 362 31.2
Psat0s3104g0160 Pisum sativum HOM05D007892 ORTHO05D009211 1.5e-16 92.0 346 30.9
Glyma.12G226900 Glycine max HOM05D007892 ORTHO05D009211 4.4e-16 90.5 352 31.0
Sc03g0010140 Simmondsia chinensis HOM05D007892 ORTHO05D009211 2.9e-15 87.8 355 30.4
Medtr2g078660 Medicago truncatula HOM05D007892 ORTHO05D009211 6.4e-15 86.7 300 32.3
vmacro11887 Vaccinium macrocarpon HOM05D007892 ORTHO05D009211 4.2e-14 84.0 354 29.7
DCAR_019569 Daucus carota HOM05D007892 ORTHO05D009211 1.2e-13 82.4 355 31.0
Phvul.010G112300 Phaseolus vulgaris HOM05D007892 ORTHO05D009211 2.1e-13 81.6 360 28.6
Lj3g0007189 Lotus japonicus HOM05D007892 ORTHO05D009211 2.7e-13 81.3 352 30.4
Ca_03530_v3 Cicer arietinum L. HOM05D007892 ORTHO05D009211 4.6e-13 80.5 276 33.0
EL10Ac4g08232 Beta vulgaris HOM05D007892 ORTHO05D009211 3.0e-12 77.8 312 31.4
Aqoxy1G02331 Aquilegia oxysepala HOM05D007892 ORTHO05D009211 1.5e-11 75.5 289 29.1
Glyma.13G273900 Glycine max HOM05D007892 ORTHO05D009211 1.9e-11 75.1 344 28.2
VMungo0331G1677 Vigna mungo HOM05D007892 ORTHO05D009211 1.6e-10 72.0 362 28.2
arahy.Tifrunner.gnm1.ann1.8Q202K Arachis hypogaea HOM05D007892 ORTHO05D009211 2.8e-10 71.2 310 28.7
AUR62036164 Chenopodium quinoa HOM05D007892 ORTHO05D009211 2.8e-10 71.2 361 28.0
PGSC0003DMG403012406 Solanum tuberosum HOM05D021138 ORTHO05D009211 6.2e-10 70.1 310 26.8
Hund22811 Selenicereus undatus HOM05D007892 ORTHO05D009211 8.1e-10 69.7 354 28.5
MSTRG.6820 Avicennia marina HOM05D007892 ORTHO05D009211 1.1e-09 69.3 269 30.5
AUR62019468 Chenopodium quinoa HOM05D007892 ORTHO05D009211 1.1e-09 69.3 374 27.8
ECA236G4021 Erigeron canadensis HOM05D000553 ORTHO05D009211 3.8e-07 60.8 159 35.2
Peaxi162Scf00069g01735 Petunia axillaris HOM05D021138 ORTHO05D009211 6.4e-07 60.1 352 27.6
Sopen07g031110 Solanum pennellii HOM05D021138 ORTHO05D009211 6.4e-07 60.1 355 24.8
HanXRQChr11g0351991 Helianthus annuus HOM05D007892 ORTHO05D009211 1.1e-06 59.3 318 26.4
Lsat_1_v5_gn_7_104640 Lactuca sativa HOM05D007892 ORTHO05D009211 1.1e-06 59.3 277 26.7
Solyc07g062920.4 Solanum lycopersicum HOM05D021138 ORTHO05D009211 1.9e-06 58.5 355 24.8
Oeu037370.2 Olea europaea HOM05D007892 ORTHO05D009211 5.4e-06 57.0 284 29.9
Nitab4.5_0002330g0130 Nicotiana tabacum HOM05D021138 ORTHO05D009211 7.1e-06 56.6 316 26.3


User provided reference genes

Program Settings