Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 5.5e-287 990.3 524 100.0
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 6.9e-213 744.2 526 74.5
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 5.1e-200 701.4 526 70.7
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 2.5e-199 699.1 526 71.1
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 4.3e-199 698.4 526 71.3
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 4.3e-199 698.4 526 71.5
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 9.0e-197 690.6 526 70.0
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 3.8e-195 685.3 527 69.8
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 3.7e-190 668.7 525 69.0
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 3.7e-190 668.7 525 69.3
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 4.1e-189 665.2 527 67.9
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 4.1e-189 665.2 527 66.2
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 6.9e-189 664.5 526 67.3
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 1.0e-187 660.6 497 70.8
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 1.9e-186 656.4 527 67.0
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 7.4e-183 644.4 528 67.6
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.6e-182 643.3 527 64.9
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 8.2e-182 641.0 528 67.0
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 5.3e-181 638.3 525 65.9
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 3.4e-180 635.6 542 64.2
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 5.9e-180 634.8 527 66.4
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 1.0e-179 634.0 527 64.7
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 2.2e-179 632.9 527 66.0
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 6.5e-179 631.3 524 64.3
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 2.1e-177 626.3 527 64.1
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 3.0e-176 622.5 525 62.7
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 3.9e-176 622.1 528 61.6
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 5.1e-176 621.7 525 62.3
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 1.5e-175 620.2 527 64.5
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 7.4e-175 617.8 539 61.8
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 1.1e-173 614.0 569 60.8
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 1.8e-173 613.2 525 61.0
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 4.1e-173 612.1 551 61.2
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 5.3e-173 611.7 525 62.9
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 9.1e-173 610.9 526 62.2
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 1.5e-172 610.1 551 61.0
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 1.7e-171 606.7 527 62.8
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 3.8e-171 605.5 526 62.4
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 8.5e-171 604.4 529 60.5
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 8.5e-171 604.4 525 62.7
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 1.4e-170 603.6 527 63.6
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 3.2e-170 602.4 527 62.4
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 5.5e-170 601.7 541 63.0
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 9.4e-170 600.9 527 63.9
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 1.6e-169 600.1 539 62.7
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 1.6e-169 600.1 525 62.7
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 2.7e-169 599.4 527 62.2
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 5.2e-168 595.1 527 61.5
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 9.7e-167 590.9 524 61.1
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 1.2e-164 583.9 527 60.7
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 2.0e-164 583.2 529 60.5
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 3.5e-164 582.4 520 61.2
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 3.5e-164 582.4 520 61.2
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.0e-163 580.9 525 60.4
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 1.9e-162 576.6 525 60.0
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 2.5e-162 576.2 564 58.0
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 2.5e-162 576.2 524 58.0
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 2.7e-161 572.8 644 53.0
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 1.2e-159 567.4 520 58.3
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 1.2e-159 567.4 520 58.1
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 1.2e-159 567.4 524 58.8
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 1.5e-159 567.0 520 57.7
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 2.0e-159 566.6 528 58.1
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 2.6e-159 566.2 520 57.5
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 2.6e-159 566.2 464 65.9
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 3.3e-159 565.8 528 58.1
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 3.3e-159 565.8 527 59.0
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 4.4e-159 565.5 524 58.8
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 1.3e-158 563.9 520 56.9
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 3.1e-157 559.3 546 55.9
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 9.1e-157 557.8 534 56.4
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 1.3e-155 553.9 547 55.0
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 2.5e-154 549.7 526 60.1
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 1.2e-153 547.4 523 58.1
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 4.4e-151 538.9 531 55.6
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 5.7e-151 538.5 520 56.3
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 5.7e-151 538.5 526 56.5
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 8.3e-150 534.6 576 53.8
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 3.8e-147 525.8 526 54.0
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 1.1e-146 524.2 518 55.0
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 8.0e-145 518.1 469 60.1
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 2.6e-143 513.1 524 54.2
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 4.4e-143 512.3 518 54.8
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 4.7e-137 492.3 447 59.7
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 9.5e-130 468.0 515 48.7
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 6.2e-129 465.3 389 65.3
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 8.0e-129 464.9 515 47.8
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 2.6e-127 459.9 450 57.6
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 2.9e-126 456.4 423 59.1
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 3.0e-115 419.9 417 59.0
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 1.2e-111 407.9 392 58.4
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 6.4e-102 375.6 554 43.3
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 2.1e-100 370.5 330 61.5
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.3e-99 367.9 524 44.1
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 1.3e-99 367.9 330 60.9
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 1.6e-92 344.4 290 62.4
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 1.6e-92 344.4 290 62.4
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 6.9e-88 328.9 389 50.4
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 2.0e-87 327.4 511 38.7
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 7.1e-77 292.4 369 50.1
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 3.9e-75 286.6 522 36.2
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 3.7e-73 280.0 236 65.7
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 5.5e-69 266.2 270 55.6
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 4.6e-68 263.1 526 34.6
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 1.8e-67 261.2 195 69.7
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 1.3e-62 245.0 289 54.0
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 2.5e-53 214.2 229 52.4
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 1.0e-51 208.8 184 60.3
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 2.2e-49 201.1 172 63.4
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 7.7e-47 192.6 163 62.6
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 1.7e-41 174.9 463 29.6
QL08p023949 Quercus lobata HOM05D005607 ORTHO05D008142 3.2e-37 160.6 103 75.7
FAN25G1444 Fragaria x ananassa HOM05D005607 ORTHO05D008142 7.5e-34 149.4 110 66.4
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 9.8e-34 149.1 290 36.2
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 2.1e-28 131.3 128 55.5
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 4.4e-18 97.1 135 37.8
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 7.0e-16 89.7 95 49.5
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 7.8e-15 86.3 101 49.5
CBR_g2888 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-11 74.3 77 46.8
Cre05.g246300 Chlamydomonas reinhardtii HOM05D005607 ORTHO05D008142 8.9e-11 72.8 237 28.3
HanXRQChr10g0304121 Helianthus annuus HOM05D005607 ORTHO05D008142 6.4e-09 66.6 63 63.5
SEGI_12563 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 3.2e-08 64.3 58 56.9
RcHm_v2.0_Chr1g0340011 Rosa chinensis HOM05D005607 ORTHO05D008142 1.7e-06 58.5 65 55.4


User provided reference genes

Program Settings