Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.2147 Acer truncatum HOM05D000718 ORTHO05D007431 1.4e-265 919.1 457 100.0
Dinv18364 Davidia involucrata HOM05D000718 ORTHO05D007431 3.4e-208 728.4 461 78.3
CANSAT35G0289 Cannabis sativa HOM05D000718 ORTHO05D007431 1.4e-206 723.0 458 77.5
GSVIVG01014199001 Vitis vinifera HOM05D000718 ORTHO05D007431 1.2e-205 719.9 459 76.9
Duzib187G1570 Durio zibethinus HOM05D000718 ORTHO05D007431 3.9e-204 714.9 462 77.1
MD03G1243500 Malus domestica HOM05D000718 ORTHO05D007431 1.1e-203 713.4 456 75.2
Thecc.07G114900 Theobroma cacao HOM05D000718 ORTHO05D007431 1.1e-203 713.4 462 76.8
Lj1A829G32 Lonicera japonica HOM05D000718 ORTHO05D007431 1.9e-203 712.6 460 76.1
Prupe.4G164800 Prunus persica HOM05D000718 ORTHO05D007431 4.3e-203 711.4 458 74.2
COL.COLO4_17547 Corchorus olitorius HOM05D000718 ORTHO05D007431 6.2e-202 707.6 476 75.0
THA.LOC104822564 Tarenaya hassleriana HOM05D000718 ORTHO05D007431 1.8e-201 706.1 460 75.4
CiPaw.11G160400 Carya illinoinensis HOM05D000718 ORTHO05D007431 1.5e-200 703.0 461 75.3
Lj3g0001987 Lotus japonicus HOM05D000718 ORTHO05D007431 2.6e-200 702.2 461 73.8
Rhsim06G0207800 Rhododendron simsii HOM05D000718 ORTHO05D007431 7.6e-200 700.7 457 76.1
TWI39G0589 Tripterygium wilfordii HOM05D000718 ORTHO05D007431 9.9e-200 700.3 458 75.5
Eucgr.K01884 Eucalyptus grandis HOM05D000718 ORTHO05D007431 2.2e-199 699.1 454 76.0
Potri.001G390700 Populus trichocarpa HOM05D000718 ORTHO05D007431 3.8e-199 698.4 459 75.8
Haze_09324 Corylus avellana HOM05D000718 ORTHO05D007431 1.1e-198 696.8 475 73.7
RcHm_v2.0_Chr5g0030941 Rosa chinensis HOM05D000718 ORTHO05D007431 1.1e-198 696.8 456 73.7
CARHR089850 Cardamine hirsuta HOM05D000718 ORTHO05D007431 4.2e-198 694.9 459 73.6
Carub.0003s1457 Capsella rubella HOM05D000718 ORTHO05D007431 9.3e-198 693.7 459 72.8
FvH4_3g18310 Fragaria vesca HOM05D000718 ORTHO05D007431 4.6e-197 691.4 456 73.5
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 1.0e-196 690.3 446 76.5
AL3G27230 Arabidopsis lyrata HOM05D000718 ORTHO05D007431 1.3e-196 689.9 459 72.8
Nitab4.5_0006953g0050 Nicotiana tabacum HOM05D000718 ORTHO05D007431 3.9e-196 688.3 460 73.9
Cc05_g11090 Coffea canephora HOM05D000718 ORTHO05D007431 5.1e-196 688.0 458 73.8
Thhalv10020708m.g Eutrema salsugineum HOM05D000718 ORTHO05D007431 8.7e-196 687.2 459 72.8
Actinidia12577 Actinidia chinensis HOM05D000718 ORTHO05D007431 1.1e-195 686.8 460 74.6
BolC5t33913H Brassica oleracea HOM05D000718 ORTHO05D007431 1.5e-195 686.4 459 73.6
PGSC0003DMG400007071 Solanum tuberosum HOM05D000718 ORTHO05D007431 2.5e-195 685.6 460 73.7
AT3G14910 Arabidopsis thaliana HOM05D000718 ORTHO05D007431 7.4e-195 684.1 459 72.1
PGR031G2045 Punica granatum HOM05D000718 ORTHO05D007431 7.4e-195 684.1 460 74.8
Sopen07g030690 Solanum pennellii HOM05D000718 ORTHO05D007431 9.6e-195 683.7 460 73.7
Ca_12194_v3 Cicer arietinum L. HOM05D000718 ORTHO05D007431 1.6e-194 682.9 461 71.1
Nitab4.5_0003565g0040 Nicotiana tabacum HOM05D000718 ORTHO05D007431 1.6e-194 682.9 460 73.3
Gohir.A01G054400 Gossypium hirsutum HOM05D000718 ORTHO05D007431 2.8e-194 682.2 462 74.0
Gorai.002G054700 Gossypium raimondii HOM05D000718 ORTHO05D007431 2.8e-194 682.2 462 74.2
Solyc07g062450.3 Solanum lycopersicum HOM05D000718 ORTHO05D007431 2.8e-194 682.2 460 73.3
FAN16G1727 Fragaria x ananassa HOM05D000718 ORTHO05D007431 4.8e-194 681.4 465 71.8
DCAR_013156 Daucus carota HOM05D000718 ORTHO05D007431 8.1e-194 680.6 459 74.3
Gohir.D01G042724 Gossypium hirsutum HOM05D000718 ORTHO05D007431 8.1e-194 680.6 462 74.0
Peaxi162Scf00111g01475 Petunia axillaris HOM05D000718 ORTHO05D007431 1.1e-193 680.2 458 73.4
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea HOM05D000718 ORTHO05D007431 2.4e-193 679.1 462 70.6
FAN25G1161 Fragaria x ananassa HOM05D000718 ORTHO05D007431 6.9e-193 677.6 456 71.7
A05p34500 Brassica napus HOM05D000718 ORTHO05D007431 9.0e-193 677.2 454 73.1
BraA05t22270Z Brassica rapa HOM05D000718 ORTHO05D007431 9.0e-193 677.2 454 73.1
Aa31LG8G2120 Aethionema arabicum HOM05D000718 ORTHO05D007431 1.5e-192 676.4 453 72.4
CAN.G375.14 Capsicum annuum HOM05D000718 ORTHO05D007431 5.8e-192 674.5 460 72.0
FAN11G0057 Fragaria x ananassa HOM05D000718 ORTHO05D007431 1.3e-191 673.3 456 72.4
BcaB06g25332 Brassica carinata HOM05D000718 ORTHO05D007431 3.8e-191 671.8 450 72.9
TPR.G16488 Trifolium pratense HOM05D000718 ORTHO05D007431 3.8e-191 671.8 461 70.5
Psat0s1037g0040 Pisum sativum HOM05D000718 ORTHO05D007431 6.4e-191 671.0 462 71.0
MELO3C025639.2 Cucumis melo HOM05D000718 ORTHO05D007431 1.9e-190 669.5 459 72.1
Ah.04g164270 Amaranthus hybridus HOM05D000718 ORTHO05D007431 3.2e-190 668.7 459 72.1
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea HOM05D000718 ORTHO05D007431 4.2e-190 668.3 457 70.5
ClCG11G017460 Citrullus lanatus HOM05D000718 ORTHO05D007431 9.3e-190 667.2 458 71.4
Sed0007644 Sechium edule HOM05D000718 ORTHO05D007431 1.2e-189 666.8 459 71.2
vmacro23465 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 6.0e-189 664.5 475 70.7
EL10Ac4g08344 Beta vulgaris HOM05D000718 ORTHO05D007431 1.3e-188 663.3 459 71.2
Phvul.011G162200 Phaseolus vulgaris HOM05D000718 ORTHO05D007431 1.8e-188 662.9 462 70.1
SalBow7G4376 Salvia bowleyana HOM05D000718 ORTHO05D007431 1.8e-188 662.9 466 72.1
Glyma.12G157600 Glycine max HOM05D000718 ORTHO05D007431 3.0e-188 662.1 459 70.8
SalBow7G4178 Salvia bowleyana HOM05D000718 ORTHO05D007431 3.0e-188 662.1 466 71.9
QL08p026242 Quercus lobata HOM05D000718 ORTHO05D007431 6.7e-188 661.0 474 71.9
Lalb_Chr01g0006831 Lupinus albus HOM05D000718 ORTHO05D007431 2.5e-187 659.1 457 69.8
AUR62042779 Chenopodium quinoa HOM05D000718 ORTHO05D007431 4.3e-187 658.3 473 69.8
Migut.H01998 Erythranthe guttata HOM05D000718 ORTHO05D007431 9.6e-187 657.1 468 70.7
Lsat_1_v5_gn_9_99900 Lactuca sativa HOM05D000718 ORTHO05D007431 1.6e-186 656.4 455 71.2
Glyma.06G228900 Glycine max HOM05D000718 ORTHO05D007431 2.1e-186 656.0 461 70.3
Oeu025333.1 Olea europaea HOM05D000718 ORTHO05D007431 3.7e-186 655.2 462 70.6
Lalb_Chr03g0031171 Lupinus albus HOM05D000718 ORTHO05D007431 4.0e-185 651.7 457 70.0
ECA240G1747 Erigeron canadensis HOM05D000718 ORTHO05D007431 1.5e-184 649.8 452 69.0
HanXRQChr15g0476211 Helianthus annuus HOM05D000718 ORTHO05D007431 1.0e-183 647.1 457 68.9
SGA_v2.0_scaffold130G34293 Striga asiatica HOM05D000718 ORTHO05D007431 1.0e-183 647.1 455 71.9
Medtr8g464030 Medicago truncatula HOM05D000718 ORTHO05D007431 4.9e-183 644.8 500 65.0
Hund02254 Selenicereus undatus HOM05D000718 ORTHO05D007431 4.2e-182 641.7 458 70.3
C05p52240 Brassica napus HOM05D000718 ORTHO05D007431 5.7e-179 631.3 429 72.5
CSS0021542 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 1.3e-178 630.2 464 70.0
PSO782G3001 Papaver somniferum HOM05D000718 ORTHO05D007431 1.1e-177 627.1 463 68.0
MBI07_g09566_MAGBIO Magnolia biondii HOM05D000718 ORTHO05D007431 2.4e-177 625.9 503 63.0
PSO478G1672 Papaver somniferum HOM05D000718 ORTHO05D007431 1.5e-176 623.2 463 67.8
Aqoxy4G00321 Aquilegia oxysepala HOM05D000718 ORTHO05D007431 1.0e-175 620.5 467 65.3
Nn1g04439 Nelumbo nucifera HOM05D000718 ORTHO05D007431 8.5e-175 617.5 425 71.1
Manes.03G101200 Manihot esculenta HOM05D000718 ORTHO05D007431 1.9e-171 606.3 400 74.2
Nn1g09174 Nelumbo nucifera HOM05D000718 ORTHO05D007431 1.8e-169 599.7 460 65.9
CDE04G1093 Ceratophyllum demersum HOM05D000718 ORTHO05D007431 7.7e-168 594.3 451 65.0
FAN21G3716 Fragaria x ananassa HOM05D000718 ORTHO05D007431 4.6e-165 585.1 398 71.1
CSS0043856 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 6.7e-164 581.3 459 65.1
VMungo1127G0879 Vigna mungo HOM05D000718 ORTHO05D007431 1.7e-162 576.6 410 68.3
vmacro11939 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 2.6e-160 569.3 475 64.0
ATR0602G196 Amborella trichopoda HOM05D000718 ORTHO05D007431 1.0e-156 557.4 459 61.0
AUR62019575 Chenopodium quinoa HOM05D000718 ORTHO05D007431 1.4e-156 557.0 425 65.9
CSS0014195 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 4.8e-154 548.5 460 62.6
Ciclev10021305m.g Citrus clementina HOM05D000718 ORTHO05D007431 1.5e-150 537.0 309 85.1
unitig_52.g17395 Utricularia gibba HOM05D000718 ORTHO05D007431 7.2e-150 534.6 466 61.4
HPP92_023429 Vanilla planifolia HOM05D000718 ORTHO05D007431 4.2e-142 508.8 463 58.3
Os09g0315800 Oryza sativa ssp. japonica HOM05D000718 ORTHO05D007431 2.7e-141 506.1 476 57.1
SEGI_16322 Sequoiadendron giganteum HOM05D000718 ORTHO05D007431 1.1e-129 467.6 449 51.4
Zm00001eb309730 Zea mays HOM05D000718 ORTHO05D007431 7.3e-126 454.9 342 64.9
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 6.1e-125 451.8 418 57.7
MD11G1263600 Malus domestica HOM05D000718 ORTHO05D007431 4.6e-120 435.6 281 74.4
Sc16g0007570 Simmondsia chinensis HOM05D000718 ORTHO05D007431 5.6e-118 428.7 299 72.9
CsaV3_4G033110 Cucumis sativus L. HOM05D000718 ORTHO05D007431 1.2e-112 411.0 302 67.2
vmacro11937 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 4.3e-110 402.5 334 65.3
vmacro23384 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 6.0e-104 382.1 347 60.2
SHI27609 Sapria himalayana HOM05D000718 ORTHO05D007431 7.3e-102 375.2 408 49.8
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis HOM05D000718 ORTHO05D007431 9.5e-102 374.8 454 44.1
Thecc.07G114700 Theobroma cacao HOM05D000718 ORTHO05D007431 1.1e-97 361.3 380 53.9
BcaB06g29518 Brassica carinata HOM05D000718 ORTHO05D002712 1.3e-95 354.4 463 47.3
SMO367G0522 Selaginella moellendorffii HOM05D000718 ORTHO05D007431 4.9e-90 335.9 452 42.9
Pp3c4_25540 Physcomitrium patens HOM05D000718 ORTHO05D007431 3.0e-87 326.6 467 38.3
Sp3g13120 Schrenkiella parvula HOM05D000718 ORTHO05D007431 9.6e-86 321.6 226 64.6
Mapoly0061s0004 Marchantia polymorpha HOM05D000718 ORTHO05D007431 3.4e-83 313.2 453 39.7
Psat4g090840 Pisum sativum HOM05D000718 ORTHO05D007431 1.6e-77 294.3 247 64.4
vmacro11938 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 2.8e-77 293.5 303 54.5
MSTRG.14233 Avicennia marina HOM05D000718 ORTHO05D007431 5.8e-75 285.8 233 61.4
Psat3g077000 Pisum sativum HOM05D000718 ORTHO05D007431 5.8e-67 259.2 255 50.2
Thecc.07G115900 Theobroma cacao HOM05D000718 ORTHO05D007431 6.9e-60 235.7 166 68.1
Sc16g0007580 Simmondsia chinensis HOM05D000718 ORTHO05D007431 1.8e-55 221.1 162 59.9
Hund02252 Selenicereus undatus HOM05D000718 ORTHO05D007431 1.4e-44 184.9 161 64.6
PGSC0003DMG400011947 Solanum tuberosum HOM05D000718 ORTHO05D007431 1.5e-38 164.9 119 64.7
MD11G1263700 Malus domestica HOM05D000718 ORTHO05D007431 2.2e-37 161.0 123 61.8
Thecc.07G115200 Theobroma cacao HOM05D000718 ORTHO05D007431 2.2e-37 161.0 128 60.2
Cpa.g.sc77.7 Carica papaya HOM05D000718 ORTHO05D007431 7.7e-35 152.5 119 63.0
TAR627G0847 Trochodendron aralioides HOM05D000718 ORTHO05D007431 6.7e-31 139.4 127 52.8
Psat2g113040 Pisum sativum HOM05D000718 ORTHO05D004709 5.3e-28 129.8 107 61.7
CBR_g49411 Chara braunii HOM05D000019 ORTHO05D000353 6.3e-21 106.3 360 26.1
CAN.G713.20 Capsicum annuum HOM05D000718 ORTHO05D007431 8.3e-21 105.9 86 61.6
Thecc.07G114000 Theobroma cacao HOM05D000718 ORTHO05D007431 1.2e-19 102.1 102 50.0
Thecc.07G113800 Theobroma cacao HOM05D000718 ORTHO05D007431 6.8e-15 86.3 63 68.3
Thecc.07G114100 Theobroma cacao HOM05D000718 ORTHO05D007431 1.5e-14 85.1 52 80.8
Lsat_1_v5_gn_9_99920 Lactuca sativa HOM05D000718 ORTHO05D007431 8.0e-08 62.8 45 73.3


User provided reference genes

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