Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.2119 Acer truncatum HOM05D008148 ORTHO05D010295 3.2e-27 124.4 66 100.0
CiPaw.11G159800 Carya illinoinensis HOM05D008148 ORTHO05D010295 4.7e-18 94.0 64 76.6
Atru.chr1.2298 Acer truncatum HOM05D008148 ORTHO05D010295 2.6e-16 88.2 56 82.1
CsaV3_4G032950 Cucumis sativus L. HOM05D008148 ORTHO05D010295 1.4e-14 82.4 69 62.3
Cpa.g.sc77.20 Carica papaya HOM05D008148 ORTHO05D010295 3.1e-14 81.3 72 59.7
ClCG11G017320 Citrullus lanatus HOM05D008148 ORTHO05D010295 4.1e-14 80.9 69 62.3
Potri.011G109100 Populus trichocarpa HOM05D008148 ORTHO05D010295 9.2e-14 79.7 68 61.8
Sed0019666 Sechium edule HOM05D008148 ORTHO05D010295 1.2e-13 79.3 69 59.4
MELO3C025654.2 Cucumis melo HOM05D008148 ORTHO05D010295 2.7e-13 78.2 69 59.4
Sabra11G0096700 Salix brachista HOM05D008148 ORTHO05D010295 4.5e-13 77.4 72 58.3
Eucgr.F03276 Eucalyptus grandis HOM05D008148 ORTHO05D010295 1.3e-12 75.9 68 61.8
RcHm_v2.0_Chr5g0030781 Rosa chinensis HOM05D008148 ORTHO05D010295 1.7e-12 75.5 61 55.7
Manes.15G095500 Manihot esculenta HOM05D008148 ORTHO05D010295 2.3e-12 75.1 67 59.7
PGR031G2401 Punica granatum HOM05D008148 ORTHO05D010295 5.0e-12 73.9 57 61.4
MD11G1264400 Malus domestica HOM05D008148 ORTHO05D010295 6.6e-12 73.6 62 58.1
Actinidia12583 Actinidia chinensis HOM05D008148 ORTHO05D010295 8.6e-12 73.2 70 55.7
FAN11G2091 Fragaria x ananassa HOM05D008148 ORTHO05D010295 8.6e-12 73.2 61 55.7
arahy.Tifrunner.gnm1.ann1.GBF3HF Arachis hypogaea HOM05D008148 ORTHO05D010295 1.1e-11 72.8 75 53.3
arahy.Tifrunner.gnm1.ann1.MJJR0W Arachis hypogaea HOM05D008148 ORTHO05D010295 1.1e-11 72.8 49 65.3
Glyma.12G230300 Glycine max HOM05D008148 ORTHO05D010295 2.5e-11 71.6 66 56.1
Sc03g0010550 Simmondsia chinensis HOM05D008148 ORTHO05D010295 3.3e-11 71.2 63 61.9
Prupe.4G163600 Prunus persica HOM05D008148 ORTHO05D010295 4.3e-11 70.9 61 55.7
Glyma.13G269300 Glycine max HOM05D008148 ORTHO05D010295 7.3e-11 70.1 68 54.4
Prupe.4G164100 Prunus persica HOM05D008148 ORTHO05D010295 9.5e-11 69.7 62 54.8
THA.LOC104812318 Tarenaya hassleriana HOM05D008148 ORTHO05D010295 9.5e-11 69.7 67 56.7
AL1G29090 Arabidopsis lyrata HOM05D008148 ORTHO05D010295 1.2e-10 69.3 66 54.5
FAN21G2680 Fragaria x ananassa HOM05D008148 ORTHO05D010295 1.6e-10 68.9 60 53.3
Thecc.07G117800 Theobroma cacao HOM05D008148 ORTHO05D010295 1.6e-10 68.9 69 58.0
BcaC07g41389 Brassica carinata HOM05D008148 ORTHO05D010295 2.8e-10 68.2 64 57.8
Duzib213G0597 Durio zibethinus HOM05D008148 ORTHO05D010295 2.8e-10 68.2 69 55.1
Thhalv10009282m.g Eutrema salsugineum HOM05D008148 ORTHO05D010295 3.6e-10 67.8 64 54.7
CARHR017420 Cardamine hirsuta HOM05D008148 ORTHO05D010295 4.7e-10 67.4 64 53.1
Sp1g15050 Schrenkiella parvula HOM05D008148 ORTHO05D010295 6.1e-10 67.0 64 53.1
AT1G16916 Arabidopsis thaliana HOM05D008148 ORTHO05D010295 1.0e-09 66.2 62 56.5
Ca_03959_v3 Cicer arietinum L. HOM05D008148 ORTHO05D010295 1.0e-09 66.2 70 51.4
Carub.0001s1665 Capsella rubella HOM05D008148 ORTHO05D010295 1.8e-09 65.5 65 53.8
TPR.G16053 Trifolium pratense HOM05D008148 ORTHO05D010295 3.1e-09 64.7 74 44.6
A09p60700 Brassica napus HOM05D008148 ORTHO05D010295 4.0e-09 64.3 65 53.8
C08p44200 Brassica napus HOM05D008148 ORTHO05D010295 4.0e-09 64.3 65 53.8
CSS0001630 Camellia sinensis var. sinensis HOM05D008148 ORTHO05D010295 4.0e-09 64.3 61 55.7
Medtr2g076020 Medicago truncatula HOM05D008148 ORTHO05D010295 5.2e-09 63.9 73 45.2
Lalb_Chr25g0285821 Lupinus albus HOM05D008148 ORTHO05D010295 6.8e-09 63.5 62 50.0
BraA09t41440Z Brassica rapa HOM05D008148 ORTHO05D010295 8.9e-09 63.2 66 56.1
Cc05_g11020 Coffea canephora HOM05D008148 ORTHO05D010295 8.9e-09 63.2 65 55.4
FAN25G0037 Fragaria x ananassa HOM05D008148 ORTHO05D010295 2.6e-08 61.6 63 49.2
GSVIVG01014187001 Vitis vinifera HOM05D008148 ORTHO05D010295 2.6e-08 61.6 58 60.3
Gohir.A01G053800 Gossypium hirsutum HOM05D008148 ORTHO05D010295 4.4e-08 60.8 69 49.3
COL.COLO4_17536 Corchorus olitorius HOM05D008148 ORTHO05D010295 5.8e-08 60.5 69 47.8
Gohir.D01G042712 Gossypium hirsutum HOM05D008148 ORTHO05D010295 5.8e-08 60.5 69 49.3
Gorai.002G054100 Gossypium raimondii HOM05D008148 ORTHO05D010295 5.8e-08 60.5 69 49.3
Psat5g237240 Pisum sativum HOM05D008148 ORTHO05D010295 7.5e-08 60.1 73 42.5
Oeu059259.1 Olea europaea HOM05D008148 ORTHO05D010295 9.8e-08 59.7 65 50.8
SalBow6G6640 Salvia bowleyana HOM05D008148 ORTHO05D010295 1.3e-07 59.3 65 50.8
SalBow7G3203 Salvia bowleyana HOM05D008148 ORTHO05D010295 2.2e-07 58.5 65 50.8
DCAR_013159 Daucus carota HOM05D008148 ORTHO05D010295 8.3e-07 56.6 43 62.8
Lj3g0020996 Lotus japonicus HOM05D008148 ORTHO05D010295 8.3e-07 56.6 70 40.0
Migut.M00719 Erythranthe guttata HOM05D008148 ORTHO05D010295 1.4e-06 55.8 47 55.3
Phvul.005G081700 Phaseolus vulgaris HOM05D008148 ORTHO05D010295 4.1e-06 54.3 44 54.5


User provided reference genes

Program Settings