Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.1684 Acer truncatum HOM05D006552 ORTHO05D008023 3.0e-83 312.0 179 100.0
Atru.chr1.2171 Acer truncatum HOM05D006552 ORTHO05D008023 3.6e-81 305.1 179 95.5
Atru.chr4.798 Acer truncatum HOM05D006552 ORTHO05D008023 8.1e-81 303.9 179 98.3
TAR627G1046 Trochodendron aralioides HOM05D006552 ORTHO05D008023 4.1e-48 195.3 178 61.2
Ciclev10015322m.g Citrus clementina HOM05D006552 ORTHO05D008023 5.9e-47 191.4 177 65.5
Dinv04390 Davidia involucrata HOM05D006552 ORTHO05D008023 1.0e-46 190.7 179 60.9
Potri.006G003100 Populus trichocarpa HOM05D006552 ORTHO05D008023 1.7e-46 189.9 179 60.9
Thecc.06G242500 Theobroma cacao HOM05D006552 ORTHO05D008023 8.5e-46 187.6 180 61.7
Cfa000018 Carpinus fangiana HOM05D006552 ORTHO05D008023 4.2e-45 185.3 179 59.2
Sabra16G0008800 Salix brachista HOM05D006552 ORTHO05D008023 4.2e-45 185.3 179 58.1
TAR629G0917 Trochodendron aralioides HOM05D006552 ORTHO05D008023 4.2e-45 185.3 176 60.2
Potri.016G003800 Populus trichocarpa HOM05D006552 ORTHO05D008023 9.4e-45 184.1 179 59.2
CSS0027101 Camellia sinensis var. sinensis HOM05D006552 ORTHO05D008023 4.6e-44 181.8 179 58.7
CSS0045827 Camellia sinensis var. sinensis HOM05D006552 ORTHO05D008023 4.6e-44 181.8 179 58.7
Rhsim13G0138800 Rhododendron simsii HOM05D006552 ORTHO05D008023 4.6e-44 181.8 183 58.5
Sabra06G0002900 Salix brachista HOM05D006552 ORTHO05D008023 4.6e-44 181.8 179 58.1
COL.COLO4_31951 Corchorus olitorius HOM05D002176 ORTHO05D002598 6.1e-44 181.4 179 64.8
Duzib192G0073 Durio zibethinus HOM05D006552 ORTHO05D008023 6.1e-44 181.4 178 59.0
Nn1g07572 Nelumbo nucifera HOM05D006552 ORTHO05D008023 3.9e-43 178.7 178 57.3
Hma1.2p1_0048F.1_g028110 Hydrangea macrophylla HOM05D006552 ORTHO05D008023 8.8e-43 177.6 135 68.1
AUR62043507 Chenopodium quinoa HOM05D006552 ORTHO05D008023 1.1e-42 177.2 179 55.9
Duzib235G0521 Durio zibethinus HOM05D006552 ORTHO05D008023 2.5e-42 176.0 126 72.2
Nn1g07745 Nelumbo nucifera HOM05D006552 ORTHO05D008023 2.5e-42 176.0 151 62.9
QL05p066675 Quercus lobata HOM05D006552 ORTHO05D008023 2.5e-42 176.0 178 57.9
vmacro03594 Vaccinium macrocarpon HOM05D006552 ORTHO05D008023 2.5e-42 176.0 179 58.7
Actinidia26617 Actinidia chinensis HOM05D006552 ORTHO05D008023 3.3e-42 175.6 128 69.5
arahy.Tifrunner.gnm1.ann1.25NBW7 Arachis hypogaea HOM05D006552 ORTHO05D008023 5.7e-42 174.9 146 65.1
arahy.Tifrunner.gnm1.ann1.UF9Q9U Arachis hypogaea HOM05D006552 ORTHO05D008023 5.7e-42 174.9 146 65.1
Prupe.4G002500 Prunus persica HOM05D006552 ORTHO05D008023 5.7e-42 174.9 179 57.5
MELO3C021670.2 Cucumis melo HOM05D006552 ORTHO05D008023 7.4e-42 174.5 146 65.8
Dinv07143 Davidia involucrata HOM05D006552 ORTHO05D008023 7.4e-42 174.5 179 58.1
AUR62022328 Chenopodium quinoa HOM05D006552 ORTHO05D008023 9.7e-42 174.1 139 65.5
MD05G1362800 Malus domestica HOM05D006552 ORTHO05D008023 1.3e-41 173.7 180 57.2
EL10Ac8g20280 Beta vulgaris HOM05D006552 ORTHO05D008023 1.7e-41 173.3 181 56.9
Manes.09G084700 Manihot esculenta HOM05D006552 ORTHO05D008023 2.2e-41 172.9 179 55.3
Lj2A255T60 Lonicera japonica HOM05D006552 ORTHO05D008023 2.8e-41 172.6 152 65.1
MD10G1340400 Malus domestica HOM05D006552 ORTHO05D008023 2.8e-41 172.6 180 57.2
Glyma.09G015800 Glycine max HOM05D006552 ORTHO05D008023 3.7e-41 172.2 132 69.7
Medtr2g027390 Medicago truncatula HOM05D006552 ORTHO05D008023 3.7e-41 172.2 123 72.4
Phvul.006G136100 Phaseolus vulgaris HOM05D006552 ORTHO05D008023 3.7e-41 172.2 141 65.2
CiPaw.09G110600 Carya illinoinensis HOM05D006552 ORTHO05D008023 4.8e-41 171.8 178 57.9
PSO210G5261 Papaver somniferum HOM05D006552 ORTHO05D008023 4.8e-41 171.8 178 53.4
ClCG01G011480 Citrullus lanatus HOM05D006552 ORTHO05D008023 6.3e-41 171.4 144 64.6
PSO210G1853 Papaver somniferum HOM05D006552 ORTHO05D008023 6.3e-41 171.4 178 53.4
Lalb_Chr15g0088331 Lupinus albus HOM05D006552 ORTHO05D008023 8.2e-41 171.0 139 64.7
Haze_07043 Corylus avellana HOM05D006552 ORTHO05D008023 1.1e-40 170.6 145 66.2
Haze_09863 Corylus avellana HOM05D006552 ORTHO05D008023 1.4e-40 170.2 179 57.0
CsaV3_1G015300 Cucumis sativus L. HOM05D006552 ORTHO05D008023 1.4e-40 170.2 146 64.4
VMungo0540G0040 Vigna mungo HOM05D006552 ORTHO05D008023 1.4e-40 170.2 143 64.3
Glyma.15G121600 Glycine max HOM05D006552 ORTHO05D008023 1.8e-40 169.9 144 65.3
Lj6g0006082 Lotus japonicus HOM05D006552 ORTHO05D008023 1.8e-40 169.9 177 55.4
TWI38G0911 Tripterygium wilfordii HOM05D006552 ORTHO05D008023 1.8e-40 169.9 180 57.2
Ca_00774_v3 Cicer arietinum L. HOM05D006552 ORTHO05D008023 2.4e-40 169.5 177 55.4
TPR.G10495 Trifolium pratense HOM05D006552 ORTHO05D008023 2.4e-40 169.5 177 54.2
CDE10G0757 Ceratophyllum demersum HOM05D006552 ORTHO05D008023 3.1e-40 169.1 180 53.9
Atru.chr1.2175 Acer truncatum HOM05D006552 ORTHO05D008023 4.1e-40 168.7 90 96.7
Gorai.010G247600 Gossypium raimondii HOM05D006552 ORTHO05D008023 5.3e-40 168.3 180 58.3
Gohir.A06G203000 Gossypium hirsutum HOM05D006552 ORTHO05D008023 6.9e-40 167.9 180 58.3
SalBow8G4188 Salvia bowleyana HOM05D006552 ORTHO05D008023 6.9e-40 167.9 124 70.2
Aqoxy1G04286 Aquilegia oxysepala HOM05D006552 ORTHO05D008023 9.1e-40 167.5 121 73.6
Gohir.D06G218700 Gossypium hirsutum HOM05D006552 ORTHO05D008023 9.1e-40 167.5 180 58.3
Cfa021888 Carpinus fangiana HOM05D006552 ORTHO05D008023 2.6e-39 166.0 130 68.5
MBI15_g38532_MAGBIO Magnolia biondii HOM05D006552 ORTHO05D008023 3.4e-39 165.6 139 64.0
Ah.12g051860 Amaranthus hybridus HOM05D006552 ORTHO05D008023 5.9e-39 164.9 180 56.1
DCAR_002248 Daucus carota HOM05D006552 ORTHO05D008023 7.7e-39 164.5 135 63.0
SalBow8G5435 Salvia bowleyana HOM05D006552 ORTHO05D008023 1.3e-38 163.7 124 68.5
Psat1g173280 Pisum sativum HOM05D006552 ORTHO05D008023 1.7e-38 163.3 150 60.0
Hund21124 Selenicereus undatus HOM05D006552 ORTHO05D008023 2.9e-38 162.5 181 53.6
PGR004G2161 Punica granatum HOM05D006552 ORTHO05D008023 3.8e-38 162.2 121 69.4
Sc17g0008030 Simmondsia chinensis HOM05D006552 ORTHO05D008023 1.1e-37 160.6 154 59.7
Zm00001eb049800 Zea mays HOM05D006552 ORTHO05D008023 1.4e-37 160.2 146 60.3
Eucgr.E03832 Eucalyptus grandis HOM05D006552 ORTHO05D008023 3.2e-37 159.1 178 53.9
Lsat_1_v5_gn_7_12841 Lactuca sativa HOM05D006552 ORTHO05D008023 3.2e-37 159.1 118 73.7
RcHm_v2.0_Chr5g0000281 Rosa chinensis HOM05D006552 ORTHO05D008023 3.2e-37 159.1 180 53.3
Sed0011361 Sechium edule HOM05D006552 ORTHO05D008023 4.2e-37 158.7 180 51.7
Zm00001eb219360 Zea mays HOM05D006552 ORTHO05D008023 5.5e-37 158.3 146 60.3
Migut.M01459 Erythranthe guttata HOM05D006552 ORTHO05D008023 7.2e-37 157.9 153 58.8
Cpa.g.sc27.207 Carica papaya HOM05D006552 ORTHO05D008023 3.6e-36 155.6 179 53.1
FvH4_3g00210 Fragaria vesca HOM05D006552 ORTHO05D008023 4.7e-36 155.2 180 53.9
Oeu022389.1 Olea europaea HOM05D006552 ORTHO05D008023 4.7e-36 155.2 144 61.1
ECA150G0011 Erigeron canadensis HOM05D006552 ORTHO05D008023 7.9e-36 154.5 144 61.1
Os08g0326100 Oryza sativa ssp. japonica HOM05D006552 ORTHO05D008023 1.4e-35 153.7 145 57.9
PGSC0003DMG400019743 Solanum tuberosum HOM05D006552 ORTHO05D008023 2.3e-35 152.9 177 52.5
FAN25G2008 Fragaria x ananassa HOM05D006552 ORTHO05D008023 3.0e-35 152.5 180 51.7
SEGI_31055 Sequoiadendron giganteum HOM05D006552 ORTHO05D008023 3.0e-35 152.5 181 50.3
Cc09_g00200 Coffea canephora HOM05D006552 ORTHO05D008023 3.9e-35 152.1 132 60.6
Peaxi162Scf00811g00441 Petunia axillaris HOM05D006552 ORTHO05D008023 5.1e-35 151.8 177 53.7
Solyc04g015170.3 Solanum lycopersicum HOM05D006552 ORTHO05D008023 6.7e-35 151.4 177 51.4
Nitab4.5_0010199g0040 Nicotiana tabacum HOM05D006552 ORTHO05D008023 1.1e-34 150.6 130 64.6
Sopen04g007210 Solanum pennellii HOM05D006552 ORTHO05D008023 1.1e-34 150.6 177 52.0
Nitab4.5_0000147g0210 Nicotiana tabacum HOM05D006552 ORTHO05D008023 1.5e-34 150.2 177 52.0
SGA_v2.0_scaffold7G03676 Striga asiatica HOM05D006552 ORTHO05D008023 2.0e-34 149.8 129 60.5
CAN.G1456.4 Capsicum annuum HOM05D006552 ORTHO05D008023 2.6e-34 149.4 177 52.5
HanXRQChr05g0129001 Helianthus annuus HOM05D006552 ORTHO05D008023 2.6e-34 149.4 134 64.9
unitig_62.g23502 Utricularia gibba HOM05D006552 ORTHO05D008023 2.6e-34 149.4 153 59.5
ATR0751G220 Amborella trichopoda HOM05D006552 ORTHO05D008023 4.4e-34 148.7 178 51.7
THA.LOC104806746 Tarenaya hassleriana HOM05D006552 ORTHO05D008023 7.4e-34 147.9 115 70.4
C07p31420 Brassica napus HOM05D006552 ORTHO05D008023 1.3e-33 147.1 128 64.8
BolC7t43685H Brassica oleracea HOM05D006552 ORTHO05D008023 1.3e-33 147.1 128 64.8
Thhalv10000925m.g Eutrema salsugineum HOM05D006552 ORTHO05D008023 1.3e-33 147.1 183 51.9
A06p44780 Brassica napus HOM05D006552 ORTHO05D008023 2.8e-33 146.0 128 64.8
BraA06t27351Z Brassica rapa HOM05D006552 ORTHO05D008023 1.1e-32 144.1 122 66.4
BcaNung06819 Brassica carinata HOM05D006552 ORTHO05D008023 3.1e-32 142.5 129 64.3
AT5G47790 Arabidopsis thaliana HOM05D006552 ORTHO05D008023 7.0e-32 141.4 135 57.8
Aa31sc219G30 Aethionema arabicum HOM05D006552 ORTHO05D008023 2.0e-31 139.8 143 55.2
AL8G11090 Arabidopsis lyrata HOM05D006552 ORTHO05D008023 2.0e-31 139.8 117 66.7
Carub.0008s0068 Capsella rubella HOM05D006552 ORTHO05D008023 2.6e-31 139.4 180 49.4
CARHR216590 Cardamine hirsuta HOM05D006552 ORTHO05D008023 7.2e-29 131.3 184 47.8
Mapoly0092s0040 Marchantia polymorpha HOM05D006552 ORTHO05D008023 3.6e-28 129.0 112 61.6
SHI24428 Sapria himalayana HOM05D002730 ORTHO05D008023 1.1e-26 124.0 132 53.0
CANSAT56G3604 Cannabis sativa HOM05D006552 ORTHO05D008023 7.4e-26 121.3 86 74.4
Pp3c12_14900 Physcomitrium patens HOM05D006552 ORTHO05D008023 9.7e-26 120.9 186 46.8
AagrBONN_evm.TU.Sc2ySwM_228.2576 Anthoceros agrestis HOM05D006552 ORTHO05D008023 1.5e-21 107.1 133 52.6
Actinidia12830 Actinidia chinensis HOM05D006552 ORTHO05D008023 5.5e-21 105.1 61 82.0
CARHR173540 Cardamine hirsuta HOM05D006552 ORTHO05D008023 1.8e-19 100.1 84 63.1
Oeu057008.1 Olea europaea HOM05D006552 ORTHO05D008023 8.8e-19 97.8 62 77.4
CBR_g31530 Chara braunii HOM05D006552 ORTHO05D008023 3.7e-17 92.4 109 46.8
HPP92_020486 Vanilla planifolia HOM05D006552 ORTHO05D008023 1.6e-15 87.0 51 82.4


User provided reference genes

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