Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.1383 Acer truncatum HOM05D007032 ORTHO05D008777 5.2e-131 471.1 243 100.0
Cfa016444 Carpinus fangiana HOM05D007032 ORTHO05D008777 1.9e-88 329.7 230 74.3
COL.COLO4_13594 Corchorus olitorius HOM05D007032 ORTHO05D008777 2.4e-88 329.3 230 75.7
RcHm_v2.0_Chr3g0497071 Rosa chinensis HOM05D007032 ORTHO05D008777 9.3e-88 327.4 227 75.3
Haze_19421 Corylus avellana HOM05D007032 ORTHO05D008777 1.2e-87 327.0 230 75.2
MD12G1003800 Malus domestica HOM05D007032 ORTHO05D008777 4.6e-87 325.1 227 74.4
QL07p019479 Quercus lobata HOM05D007032 ORTHO05D008777 4.6e-87 325.1 232 72.4
Prupe.7G004300 Prunus persica HOM05D007032 ORTHO05D008777 6.0e-87 324.7 227 74.4
Atru.chr2.1387 Acer truncatum HOM05D007032 ORTHO05D008777 1.0e-86 323.9 166 98.8
GSVIVG01033405001 Vitis vinifera HOM05D007032 ORTHO05D008777 1.1e-85 320.5 227 72.2
Dinv37016 Davidia involucrata HOM05D007032 ORTHO05D008777 2.5e-85 319.3 230 72.6
Manes.09G141200 Manihot esculenta HOM05D007032 ORTHO05D008777 3.3e-85 318.9 228 73.2
Thecc.05G294800 Theobroma cacao HOM05D007032 ORTHO05D008777 3.3e-85 318.9 230 72.6
Ciclev10021147m.g Citrus clementina HOM05D007032 ORTHO05D008777 4.3e-85 318.5 230 73.5
Cpa.g.sc51.117 Carica papaya HOM05D007032 ORTHO05D008777 1.6e-84 316.6 227 73.6
Potri.013G058100 Populus trichocarpa HOM05D007032 ORTHO05D008777 5.3e-83 311.6 227 72.7
CiPaw.10G001100 Carya illinoinensis HOM05D007032 ORTHO05D008777 2.6e-82 309.3 225 70.7
CSS0032159 Camellia sinensis var. sinensis HOM05D007032 ORTHO05D008777 1.7e-81 306.6 230 70.0
Duzib177G0078 Durio zibethinus HOM05D007032 ORTHO05D008777 1.7e-81 306.6 227 72.2
Duzib177G0665 Durio zibethinus HOM05D007032 ORTHO05D008777 1.7e-81 306.6 227 72.2
Actinidia17303 Actinidia chinensis HOM05D007032 ORTHO05D008777 6.4e-81 304.7 230 67.4
Sabra13G0051600 Salix brachista HOM05D007032 ORTHO05D008777 5.5e-80 301.6 227 68.7
Lj1g0006283 Lotus japonicus HOM05D007032 ORTHO05D008777 7.1e-80 301.2 229 72.5
Sabra19G0042800 Salix brachista HOM05D007032 ORTHO05D008777 9.3e-80 300.8 227 68.7
Gohir.D13G177900 Gossypium hirsutum HOM05D007032 ORTHO05D008777 1.6e-79 300.1 227 70.0
TWI34G0430 Tripterygium wilfordii HOM05D007032 ORTHO05D008777 4.6e-79 298.5 227 69.2
CANSAT78G2258 Cannabis sativa HOM05D007032 ORTHO05D008777 7.9e-79 297.7 227 69.6
Ca_08264_v3 Cicer arietinum L. HOM05D007032 ORTHO05D008777 7.9e-79 297.7 227 67.8
TAR623G0513 Trochodendron aralioides HOM05D007032 ORTHO05D008777 7.9e-79 297.7 230 68.7
Glyma.19G112100 Glycine max HOM05D007032 ORTHO05D008777 1.3e-78 297.0 227 69.6
Gohir.A13G172000 Gossypium hirsutum HOM05D007032 ORTHO05D008777 1.3e-78 297.0 227 69.6
FvH4_1g28130 Fragaria vesca HOM05D007032 ORTHO05D008777 1.8e-78 296.6 230 67.8
Eucgr.K01499 Eucalyptus grandis HOM05D007032 ORTHO05D008777 2.3e-78 296.2 227 68.3
Potri.019G035100 Populus trichocarpa HOM05D007032 ORTHO05D008777 1.5e-77 293.5 227 67.4
Nitab4.5_0002769g0070 Nicotiana tabacum HOM05D007032 ORTHO05D008777 4.3e-77 292.0 234 67.1
PGSC0003DMG400008355 Solanum tuberosum HOM05D007032 ORTHO05D008777 5.6e-77 291.6 233 66.1
Solyc10g078560.3 Solanum lycopersicum HOM05D007032 ORTHO05D008777 9.6e-77 290.8 233 66.1
Sopen10g029210 Solanum pennellii HOM05D007032 ORTHO05D008777 9.6e-77 290.8 233 65.7
FAN19G2553 Fragaria x ananassa HOM05D007032 ORTHO05D008777 4.8e-76 288.5 237 65.8
FAN26G0126 Fragaria x ananassa HOM05D007032 ORTHO05D008777 4.8e-76 288.5 237 66.2
Cc06_g22990 Coffea canephora HOM05D007032 ORTHO05D008777 6.2e-76 288.1 230 65.2
VMungo1383G0477 Vigna mungo HOM05D007032 ORTHO05D008777 1.1e-75 287.3 227 67.4
arahy.Tifrunner.gnm1.ann1.U2PEBB Arachis hypogaea HOM05D007032 ORTHO05D008777 2.4e-75 286.2 227 67.8
Gorai.013G203200 Gossypium raimondii HOM05D007032 ORTHO05D008777 4.0e-75 285.4 227 67.4
TPR.G5887 Trifolium pratense HOM05D007032 ORTHO05D008777 6.9e-75 284.6 227 66.1
ClCG10G013370 Citrullus lanatus HOM05D007032 ORTHO05D008777 1.2e-74 283.9 241 62.7
CsaV3_3G043260 Cucumis sativus L. HOM05D007032 ORTHO05D008777 1.2e-74 283.9 227 64.3
CAN.G960.47 Capsicum annuum HOM05D007032 ORTHO05D008777 2.0e-74 283.1 233 65.2
Lalb_Chr22g0359131 Lupinus albus HOM05D007032 ORTHO05D008777 2.6e-74 282.7 227 66.5
FAN28G1183 Fragaria x ananassa HOM05D007032 ORTHO05D008777 4.5e-74 282.0 268 59.3
MELO3C026886.2 Cucumis melo HOM05D007032 ORTHO05D008777 5.8e-74 281.6 227 64.8
Peaxi162Scf00463g00017 Petunia axillaris HOM05D007032 ORTHO05D008777 5.8e-74 281.6 233 65.2
Phvul.001G110800 Phaseolus vulgaris HOM05D007032 ORTHO05D008777 7.6e-74 281.2 227 67.0
Sed0015080 Sechium edule HOM05D007032 ORTHO05D008777 2.2e-73 279.6 227 65.2
Nitab4.5_0004844g0030 Nicotiana tabacum HOM05D007032 ORTHO05D008777 4.9e-73 278.5 233 63.5
PGR142G4364 Punica granatum HOM05D007032 ORTHO05D008777 8.4e-73 277.7 227 63.9
DCAR_017051 Daucus carota HOM05D007032 ORTHO05D008777 1.1e-72 277.3 230 61.7
vmacro09138 Vaccinium macrocarpon HOM05D007032 ORTHO05D008777 4.2e-72 275.4 243 60.9
Medtr7g085600 Medicago truncatula HOM05D007032 ORTHO05D008777 7.1e-72 274.6 227 64.8
Nn7g35853 Nelumbo nucifera HOM05D007032 ORTHO05D008777 3.5e-71 272.3 230 65.2
Aqoxy1G00484 Aquilegia oxysepala HOM05D007032 ORTHO05D008777 1.3e-70 270.4 230 61.7
THA.LOC104820772 Tarenaya hassleriana HOM05D007032 ORTHO05D008777 1.3e-70 270.4 233 61.8
Psat0s1971g0040 Pisum sativum HOM05D007032 ORTHO05D008777 1.8e-70 270.0 230 63.5
Sc23g0006440 Simmondsia chinensis HOM05D007032 ORTHO05D008777 5.1e-70 268.5 227 62.1
MBI04_g38346_MAGBIO Magnolia biondii HOM05D007032 ORTHO05D008777 4.1e-67 258.8 231 62.8
arahy.Tifrunner.gnm1.ann1.TEV0AS Arachis hypogaea HOM05D007032 ORTHO05D008777 4.5e-66 255.4 211 64.9
ECA233G0049 Erigeron canadensis HOM05D007032 ORTHO05D008777 4.5e-66 255.4 228 59.2
AUR62032696 Chenopodium quinoa HOM05D007032 ORTHO05D008777 5.9e-66 255.0 228 58.3
Sabra19G0045100 Salix brachista HOM05D007032 ORTHO05D008777 2.2e-65 253.1 210 63.8
CDE10G0774 Ceratophyllum demersum HOM05D007032 ORTHO05D008777 2.5e-64 249.6 228 57.0
Sp6g26170 Schrenkiella parvula HOM05D007032 ORTHO05D008777 9.4e-64 247.7 238 58.8
AT5G18140 Arabidopsis thaliana HOM05D007032 ORTHO05D008777 7.9e-63 244.6 232 58.2
MSTRG.26067 Avicennia marina HOM05D007032 ORTHO05D008777 7.9e-63 244.6 230 58.7
Carub.0006s1643 Capsella rubella HOM05D007032 ORTHO05D008777 1.4e-62 243.8 233 57.9
Aa31LG11G11460 Aethionema arabicum HOM05D007032 ORTHO05D008777 1.1e-61 240.7 229 57.6
AL6G29340 Arabidopsis lyrata HOM05D007032 ORTHO05D008777 1.5e-61 240.4 233 59.7
Thhalv10014046m.g Eutrema salsugineum HOM05D007032 ORTHO05D008777 2.5e-61 239.6 234 58.5
Actinidia38613 Actinidia chinensis HOM05D007032 ORTHO05D008777 3.3e-61 239.2 196 62.8
EL10Ac3g06823 Beta vulgaris HOM05D007032 ORTHO05D008777 5.7e-61 238.4 238 56.3
SalBow1G8415 Salvia bowleyana HOM05D007032 ORTHO05D008777 2.2e-60 236.5 233 57.5
BolC9t58727H Brassica oleracea HOM05D007032 ORTHO05D008777 2.8e-60 236.1 231 57.1
A10p21360 Brassica napus HOM05D007032 ORTHO05D008777 3.7e-60 235.7 231 57.6
BraA10t44199Z Brassica rapa HOM05D007032 ORTHO05D008777 3.7e-60 235.7 231 57.6
Lsat_1_v5_gn_6_37021 Lactuca sativa HOM05D007032 ORTHO05D008777 1.4e-59 233.8 232 55.2
PSO339G2173 Papaver somniferum HOM05D007032 ORTHO05D008777 2.4e-59 233.0 234 57.3
SGA_v2.0_scaffold94G28401 Striga asiatica HOM05D007032 ORTHO05D008777 1.2e-58 230.7 227 57.3
Oeu024503.1 Olea europaea HOM05D007032 ORTHO05D008777 2.0e-58 229.9 205 60.5
Migut.K00006 Erythranthe guttata HOM05D007032 ORTHO05D008777 4.5e-58 228.8 232 56.5
C09p58830 Brassica napus HOM05D007032 ORTHO05D008777 1.7e-57 226.9 234 55.6
BcaB08g36702 Brassica carinata HOM05D007032 ORTHO05D008777 2.9e-57 226.1 235 57.0
Ah.04g153180 Amaranthus hybridus HOM05D002059 ORTHO05D002210 4.1e-51 205.7 227 54.2
ATR0737G130 Amborella trichopoda HOM05D007032 ORTHO05D008777 3.8e-49 199.1 232 47.4
CARHR194930 Cardamine hirsuta HOM05D007032 ORTHO05D008777 6.5e-49 198.4 212 55.2
HanXRQChr02g0054241 Helianthus annuus HOM05D007032 ORTHO05D008777 6.7e-46 188.3 282 41.5
HPP92_018478 Vanilla planifolia HOM05D007032 ORTHO05D008777 1.3e-44 184.1 238 46.6
HPP92_018484 Vanilla planifolia HOM05D007032 ORTHO05D008777 1.7e-44 183.7 233 46.8
CDE10G1270 Ceratophyllum demersum HOM05D007032 ORTHO05D008777 2.4e-35 153.3 100 76.0
SEGI_34502 Sequoiadendron giganteum HOM05D007032 ORTHO05D008777 1.2e-34 151.0 236 38.6
Nitab4.5_0000394g0040 Nicotiana tabacum HOM05D007032 ORTHO05D008777 1.1e-16 91.3 99 57.6
Nitab4.5_0000394g0030 Nicotiana tabacum HOM05D007032 ORTHO05D008777 7.3e-16 88.6 95 52.6
Glyma.16G041000 Glycine max HOM05D007032 ORTHO05D008777 3.6e-15 86.3 73 57.5
Pp3c6_3480 Physcomitrium patens HOM05D007032 ORTHO05D008777 3.1e-14 83.2 261 27.2
SMO111G0210 Selaginella moellendorffii HOM05D007032 ORTHO05D008777 8.9e-14 81.6 236 27.5
AUR62032051 Chenopodium quinoa HOM05D007032 ORTHO05D008777 1.2e-13 81.3 87 50.6
Pp3c25_13250 Physcomitrium patens HOM05D007032 ORTHO05D008777 3.7e-12 76.3 266 26.3
Nitab4.5_0000626g0040 Nicotiana tabacum HOM05D007032 ORTHO05D008777 2.0e-10 70.5 134 42.5
C08p30760 Brassica napus HOM05D004126 ORTHO05D004818 9.5e-08 61.6 42 69.0


User provided reference genes

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