Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 2.9e-171 605.1 302 100.0
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 4.3e-167 591.3 295 100.0
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 2.8e-118 429.1 298 74.5
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 3.3e-103 379.0 326 63.5
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 3.3e-103 379.0 297 67.7
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 1.3e-102 377.1 296 66.2
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 1.7e-102 376.7 297 65.3
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 1.7e-102 376.7 296 66.2
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 3.7e-102 375.6 297 65.7
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 4.8e-102 375.2 301 65.4
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 6.3e-102 374.8 296 65.9
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 6.3e-102 374.8 300 66.3
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 3.1e-101 372.5 302 64.6
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 3.1e-101 372.5 302 64.9
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.9e-99 365.9 306 63.4
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 6.5e-99 364.8 297 66.0
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.5e-98 362.8 306 63.4
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 3.2e-98 362.5 299 66.9
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 2.7e-97 359.4 305 63.9
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 3.6e-97 359.0 292 62.7
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 3.6e-97 359.0 300 62.7
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 1.0e-96 357.5 299 64.9
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 5.2e-96 355.1 295 63.4
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 1.5e-95 353.6 297 64.6
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 2.6e-95 352.8 278 64.0
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 9.8e-95 350.9 296 64.2
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 9.8e-95 350.9 296 64.2
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 1.4e-93 347.1 295 60.3
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 2.4e-93 346.3 303 63.0
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.4e-93 346.3 306 61.4
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 2.4e-93 346.3 297 60.9
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 2.4e-93 346.3 300 60.0
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 4.1e-93 345.5 309 61.5
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 3.5e-92 342.4 299 60.5
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 1.5e-90 337.0 298 60.1
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 3.6e-89 332.4 300 61.7
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 3.6e-89 332.4 300 61.7
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 8.0e-89 331.3 295 59.0
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 1.0e-88 330.9 303 60.1
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 1.8e-88 330.1 303 61.4
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 4.0e-88 328.9 295 58.0
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 1.2e-87 327.4 298 58.1
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 1.5e-87 327.0 302 59.9
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 2.0e-87 326.6 303 60.4
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 4.4e-87 325.5 300 60.0
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 4.4e-87 325.5 300 57.7
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 1.7e-86 323.6 296 58.1
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 3.7e-86 322.4 299 61.9
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 8.3e-86 321.2 302 56.3
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 1.1e-85 320.9 297 58.6
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 1.1e-85 320.9 303 57.8
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 1.4e-85 320.5 300 56.7
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 1.4e-85 320.5 297 59.9
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 1.4e-85 320.5 299 57.5
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.8e-85 320.1 299 58.2
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 3.1e-85 319.3 298 58.1
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 3.1e-85 319.3 299 58.2
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 4.1e-85 318.9 302 56.3
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 9.1e-85 317.8 297 58.2
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 1.2e-84 317.4 298 61.1
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 1.7e-83 313.5 295 56.3
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 2.9e-83 312.8 320 53.8
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 4.2e-82 308.9 330 54.2
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 1.6e-81 307.0 313 56.5
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 4.7e-81 305.4 295 53.6
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 4.7e-81 305.4 299 55.9
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 6.1e-81 305.1 297 59.6
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 1.4e-80 303.9 299 58.2
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 2.3e-75 286.6 297 54.2
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 4.3e-74 282.3 296 53.4
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 1.8e-72 276.9 295 51.5
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 2.9e-70 269.6 305 53.4
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 6.4e-70 268.5 261 53.3
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 2.7e-68 263.1 297 54.5
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.3e-67 260.8 269 55.0
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 1.1e-66 257.7 296 49.0
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 8.6e-59 231.5 302 42.1
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 2.5e-50 203.4 300 39.3
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 4.0e-48 196.1 182 61.5
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 5.8e-47 192.2 177 58.2
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 5.8e-47 192.2 179 62.0
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 3.8e-46 189.5 303 37.3
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 6.4e-46 188.7 293 38.2
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 1.3e-30 137.9 124 56.5
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 5.5e-29 132.5 94 70.2
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 7.1e-29 132.1 365 28.2
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 1.2e-23 114.8 120 50.8


User provided reference genes

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