Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.1159 Acer truncatum HOM05D000002 ORTHO05D000001 4.1e-66 254.6 129 100.0
Atru.chr13.1786 Acer truncatum HOM05D000002 ORTHO05D000001 3.6e-30 135.2 99 68.7
Atru.chr6.233 Acer truncatum HOM05D000002 ORTHO05D000001 1.2e-28 130.2 99 66.7
Atru.chr4.3156 Acer truncatum HOM05D000002 ORTHO05D000001 7.5e-28 127.5 99 64.6
Atru.chr6.358 Acer truncatum HOM05D000002 ORTHO05D000001 7.5e-28 127.5 97 68.0
Atru.chr5.2226 Acer truncatum HOM05D000002 ORTHO05D000001 1.8e-26 122.9 134 54.5
Atru.chr13.2624 Acer truncatum HOM05D000002 ORTHO05D000001 4.7e-22 108.2 81 65.4
Atru.chr7.437 Acer truncatum HOM05D000002 ORTHO05D000001 2.4e-18 95.9 78 61.5
Atru.chr8.532 Acer truncatum HOM05D000002 ORTHO05D000001 2.4e-18 95.9 58 79.3
Atru.chr6.1164 Acer truncatum HOM05D000002 ORTHO05D000001 3.0e-16 89.0 89 51.7
Actinidia05383 Actinidia chinensis HOM05D000002 ORTHO05D000001 6.2e-14 81.3 95 46.3
Atru.chr9.1627 Acer truncatum HOM05D000002 ORTHO05D000001 1.8e-13 79.7 87 47.1
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 8.3e-11 70.9 87 42.5
VMungo0540G0563 Vigna mungo HOM05D000002 ORTHO05D000001 1.4e-10 70.1 87 40.2
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 1.9e-10 69.7 83 41.0
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.4e-10 68.2 79 40.5
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 9.2e-10 67.4 79 41.8
Psat5g305960 Pisum sativum HOM05D000002 ORTHO05D000001 1.2e-09 67.0 83 39.8
Atru.chr1.1479 Acer truncatum HOM05D000002 ORTHO05D000001 3.5e-09 65.5 78 50.0
Hma1.2p1_0240F.1_g100250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.5e-09 65.5 81 42.0
VMungo0251G1185 Vigna mungo HOM05D000002 ORTHO05D000001 4.6e-09 65.1 79 39.2
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 6.0e-09 64.7 84 34.5
Manes.13G013492 Manihot esculenta HOM05D000002 ORTHO05D000001 5.0e-08 61.6 85 36.5
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 5.0e-08 61.6 90 34.4
Atru.chr4.1289 Acer truncatum HOM05D000002 ORTHO05D000001 6.6e-08 61.2 84 39.3
Migut.K01257 Erythranthe guttata HOM05D000002 ORTHO05D000001 6.6e-08 61.2 84 29.8
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.6e-08 61.2 87 37.9
Atru.chr7.1078 Acer truncatum HOM05D000002 ORTHO05D000001 8.6e-08 60.8 103 37.9
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 8.6e-08 60.8 79 41.8
VMungo1309G3040 Vigna mungo HOM05D000002 ORTHO05D000001 1.1e-07 60.5 83 36.1
Lj2g0024035 Lotus japonicus HOM05D000002 ORTHO05D000001 1.5e-07 60.1 79 39.2
VMungo1080G0955 Vigna mungo HOM05D000002 ORTHO05D000001 1.5e-07 60.1 72 41.7
COL.COLO4_12289 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.3e-07 58.9 88 34.1
Nitab4.5_0002205g0040 Nicotiana tabacum HOM05D000002 ORTHO05D000001 3.3e-07 58.9 73 41.1
Hma1.2p1_0462F.1_g158010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-07 58.5 84 39.3
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-07 58.2 79 32.9
Hma1.2p1_2469F.1_g322690 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.3e-07 57.8 86 33.7
Hma1.2p1_0158F.1_g069590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.5e-07 57.4 86 33.7
Hma1.2p1_1596F.1_g292760 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.5e-07 57.4 90 34.4
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-07 57.4 79 32.9
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-07 57.4 79 32.9
Psat7g134120 Pisum sativum HOM05D000002 ORTHO05D000001 1.2e-06 57.0 62 43.5
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.2e-06 57.0 87 34.5
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-06 56.2 87 32.2
Rhsim05G0182900 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.1e-06 56.2 87 34.5
Hma1.2p1_0200F.1_g086090 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.6e-06 55.5 88 34.1
Hma1.2p1_0611F.1_g188700 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.6e-06 55.5 87 32.2
Gorai.013G092800 Gossypium raimondii HOM05D000002 ORTHO05D000001 4.7e-06 55.1 81 32.1
MD15G1119400 Malus domestica HOM05D000056 ORTHO05D000001 4.7e-06 55.1 92 39.1
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 4.7e-06 55.1 85 32.9
Nitab4.5_0000485g0090 Nicotiana tabacum HOM05D000002 ORTHO05D000001 8.1e-06 54.3 79 36.7
Nitab4.5_0000905g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 8.1e-06 54.3 80 38.8
Sopen09g011210 Solanum pennellii HOM05D000002 ORTHO05D000001 8.1e-06 54.3 75 37.3
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 8.1e-06 54.3 79 34.2


User provided reference genes

Program Settings