Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.1138 Acer truncatum HOM05D002281 ORTHO05D005599 0.0e+00 2543.8 1287 100.0
Thecc.05G264800 Theobroma cacao HOM05D002281 ORTHO05D005599 0.0e+00 2328.5 1288 90.5
Gorai.013G119000 Gossypium raimondii HOM05D002281 ORTHO05D005599 0.0e+00 2322.0 1288 90.1
Gohir.A13G102900 Gossypium hirsutum HOM05D002281 ORTHO05D005599 0.0e+00 2319.7 1288 90.1
Gohir.D13G106101 Gossypium hirsutum HOM05D002281 ORTHO05D005599 0.0e+00 2317.7 1288 89.9
Cfa006304 Carpinus fangiana HOM05D002281 ORTHO05D005599 0.0e+00 2308.1 1286 90.0
Dinv05786 Davidia involucrata HOM05D002281 ORTHO05D005599 0.0e+00 2308.1 1286 90.1
CSS0028465 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D005599 0.0e+00 2306.6 1284 89.5
Potri.019G025200 Populus trichocarpa HOM05D002281 ORTHO05D005599 0.0e+00 2304.6 1286 89.5
Manes.09G145500 Manihot esculenta HOM05D002281 ORTHO05D005599 0.0e+00 2300.8 1286 89.4
CANSAT54G0020 Cannabis sativa HOM05D002281 ORTHO05D005599 0.0e+00 2287.7 1286 88.4
CiPaw.07G076600 Carya illinoinensis HOM05D002281 ORTHO05D005599 0.0e+00 2283.8 1286 89.0
TWI60G0078 Tripterygium wilfordii HOM05D002281 ORTHO05D005599 0.0e+00 2278.4 1284 88.6
GSVIVG01026355001 Vitis vinifera HOM05D002281 ORTHO05D005599 0.0e+00 2276.9 1300 87.6
Duzib106G1897 Durio zibethinus HOM05D002281 ORTHO05D005599 0.0e+00 2275.7 1288 88.9
Prupe.6G354800 Prunus persica HOM05D002281 ORTHO05D005599 0.0e+00 2268.4 1283 88.6
Ciclev10023801m.g Citrus clementina HOM05D002281 ORTHO05D005599 0.0e+00 2266.5 1296 89.1
Potri.013G051200 Populus trichocarpa HOM05D002281 ORTHO05D005599 0.0e+00 2263.0 1286 88.0
FvH4_6g01330 Fragaria vesca HOM05D002281 ORTHO05D005599 0.0e+00 2260.0 1284 88.3
Eucgr.B02169 Eucalyptus grandis HOM05D002281 ORTHO05D005599 0.0e+00 2253.4 1291 87.8
TAR362G0445 Trochodendron aralioides HOM05D002281 ORTHO05D005599 0.0e+00 2251.1 1286 87.9
Phvul.006G107600 Phaseolus vulgaris HOM05D002281 ORTHO05D005599 0.0e+00 2250.7 1289 87.6
Glyma.19G250600 Glycine max HOM05D002281 ORTHO05D005599 0.0e+00 2249.6 1285 87.5
Glyma.03G253000 Glycine max HOM05D002281 ORTHO05D005599 0.0e+00 2248.8 1285 87.7
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2248.4 1286 87.8
Sabra19G0037800 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 2246.9 1302 87.1
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2246.1 1289 87.9
Sabra19G0034800 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 2242.6 1302 86.9
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2242.2 1299 87.0
PGR142G2635 Punica granatum HOM05D002281 ORTHO05D005599 0.0e+00 2238.4 1284 87.0
Medtr7g116590 Medicago truncatula HOM05D002281 ORTHO05D005599 0.0e+00 2232.6 1293 86.9
arahy.Tifrunner.gnm1.ann1.KCE1UK Arachis hypogaea HOM05D002281 ORTHO05D005599 0.0e+00 2231.8 1322 85.3
Lj1g0020458 Lotus japonicus HOM05D002281 ORTHO05D005599 0.0e+00 2231.1 1287 86.7
COL.COLO4_38179 Corchorus olitorius HOM05D002281 ORTHO05D005599 0.0e+00 2224.1 1288 86.8
THA.LOC104820753 Tarenaya hassleriana HOM05D002281 ORTHO05D005599 0.0e+00 2220.3 1284 85.8
VMungo0540G0745 Vigna mungo HOM05D002281 ORTHO05D005599 0.0e+00 2220.3 1287 86.6
Solyc11g013280.1 Solanum lycopersicum HOM05D002281 ORTHO05D005599 0.0e+00 2216.4 1287 86.2
Carub.0006s1667 Capsella rubella HOM05D002281 ORTHO05D005599 0.0e+00 2214.1 1284 85.5
AT5G18410 Arabidopsis thaliana HOM05D002281 ORTHO05D005599 0.0e+00 2213.3 1284 85.5
BolC3t13512H Brassica oleracea HOM05D002281 ORTHO05D005599 0.0e+00 2206.0 1293 84.8
Thhalv10012457m.g Eutrema salsugineum HOM05D002281 ORTHO05D005599 0.0e+00 2205.6 1285 85.4
CARHR194610 Cardamine hirsuta HOM05D002281 ORTHO05D005599 0.0e+00 2202.6 1284 85.0
Hma1.2p1_0153F.1_g067890 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 0.0e+00 2201.8 1291 86.1
ECA233G3880 Erigeron canadensis HOM05D002281 ORTHO05D005599 0.0e+00 2200.6 1283 85.5
AL6G29660 Arabidopsis lyrata HOM05D002281 ORTHO05D005599 0.0e+00 2198.7 1288 84.9
Sopen11g008300 Solanum pennellii HOM05D002281 ORTHO05D005599 0.0e+00 2198.7 1287 85.8
Sed0017844 Sechium edule HOM05D002281 ORTHO05D005599 0.0e+00 2191.8 1293 84.7
BraA03t10208Z Brassica rapa HOM05D002281 ORTHO05D005599 0.0e+00 2189.8 1296 84.3
HanXRQChr04g0111671 Helianthus annuus HOM05D002281 ORTHO05D005599 0.0e+00 2179.1 1299 84.1
Ca_09474_v3 Cicer arietinum L. HOM05D002281 ORTHO05D005599 0.0e+00 2178.7 1310 84.4
SalBow7G0462 Salvia bowleyana HOM05D002281 ORTHO05D005599 0.0e+00 2178.3 1287 83.8
arahy.Tifrunner.gnm1.ann1.T4Q4MP Arachis hypogaea HOM05D002281 ORTHO05D005599 0.0e+00 2175.2 1290 85.3
Aqoxy5G01434 Aquilegia oxysepala HOM05D002281 ORTHO05D005599 0.0e+00 2173.7 1286 84.1
Nn1g03089 Nelumbo nucifera HOM05D002281 ORTHO05D005599 0.0e+00 2173.7 1286 85.1
MSTRG.1472 Avicennia marina HOM05D002281 ORTHO05D005599 0.0e+00 2172.9 1287 83.8
Sc09g0001770 Simmondsia chinensis HOM05D002281 ORTHO05D005599 0.0e+00 2163.3 1286 84.0
Sp6g25910 Schrenkiella parvula HOM05D002281 ORTHO05D005599 0.0e+00 2160.6 1287 83.9
Migut.C01166 Erythranthe guttata HOM05D002281 ORTHO05D005599 0.0e+00 2160.2 1287 83.7
SalBow7G2659 Salvia bowleyana HOM05D002281 ORTHO05D005599 0.0e+00 2155.9 1287 83.4
Lsat_1_v5_gn_8_2941 Lactuca sativa HOM05D002281 ORTHO05D005599 0.0e+00 2154.4 1285 84.5
A03p08830 Brassica napus HOM05D002281 ORTHO05D005599 0.0e+00 2152.9 1297 83.2
PSO674G0074 Papaver somniferum HOM05D002281 ORTHO05D005599 0.0e+00 2151.7 1286 83.6
Haze_04485 Corylus avellana HOM05D002281 ORTHO05D005599 0.0e+00 2150.9 1306 84.5
Nitab4.5_0000494g0100 Nicotiana tabacum HOM05D002281 ORTHO05D005599 0.0e+00 2149.0 1287 84.3
C03p10320 Brassica napus HOM05D002281 ORTHO05D005599 0.0e+00 2145.5 1294 83.2
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2138.2 1288 84.4
PSO170G6144 Papaver somniferum HOM05D002281 ORTHO05D005599 0.0e+00 2137.5 1286 83.1
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 0.0e+00 2115.1 1297 82.0
EL10Ac4g09788 Beta vulgaris HOM05D002281 ORTHO05D005599 0.0e+00 2104.3 1286 81.8
Nitab4.5_0000051g0330 Nicotiana tabacum HOM05D002281 ORTHO05D005599 0.0e+00 2062.0 1414 76.1
SGA_v2.0_scaffold52G18996 Striga asiatica HOM05D002281 ORTHO05D005599 0.0e+00 2036.5 1213 83.2
Sabra13G0046600 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 2027.7 1548 70.2
Cc10_g10590 Coffea canephora HOM05D002281 ORTHO05D005599 0.0e+00 1996.5 1171 84.8
Hund07164 Selenicereus undatus HOM05D002281 ORTHO05D005599 0.0e+00 1989.9 1221 80.8
Aa31LG11G11220 Aethionema arabicum HOM05D002281 ORTHO05D005599 0.0e+00 1986.1 1287 79.2
Os03g0143800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D005599 0.0e+00 1951.4 1290 75.9
Zm00001eb003550 Zea mays HOM05D002281 ORTHO05D005599 0.0e+00 1916.0 1288 74.7
AUR62000642 Chenopodium quinoa HOM05D002281 ORTHO05D005599 0.0e+00 1798.5 1314 72.1
Cpa.g.sc51.37 Carica papaya HOM05D002281 ORTHO05D005599 0.0e+00 1694.1 966 88.7
Psat0s3583g0040 Pisum sativum HOM05D002281 ORTHO05D005599 0.0e+00 1671.4 954 88.6
RcHm_v2.0_Chr3g0448901 Rosa chinensis HOM05D002281 ORTHO05D005599 0.0e+00 1665.2 939 87.8
Rhsim05G0168900 Rhododendron simsii HOM05D002281 ORTHO05D005599 0.0e+00 1605.5 1068 78.0
Actinidia03823 Actinidia chinensis HOM05D002281 ORTHO05D005599 0.0e+00 1597.0 907 86.3
Lalb_Chr18g0044201 Lupinus albus HOM05D002281 ORTHO05D005599 0.0e+00 1569.3 912 85.0
MELO3C015463.2 Cucumis melo HOM05D002281 ORTHO05D005599 0.0e+00 1560.8 937 82.4
AagrBONN_evm.TU.Sc2ySwM_344.4016 Anthoceros agrestis HOM05D002281 ORTHO05D005599 0.0e+00 1538.1 1291 60.9
HPP92_013019 Vanilla planifolia HOM05D002281 ORTHO05D005599 0.0e+00 1531.5 1209 65.6
Mapoly0078s0045 Marchantia polymorpha HOM05D002281 ORTHO05D005599 0.0e+00 1520.4 1292 59.4
ClCG03G011410 Citrullus lanatus HOM05D002281 ORTHO05D005599 0.0e+00 1519.6 908 82.3
CsaV3_1G040360 Cucumis sativus L. HOM05D002281 ORTHO05D005599 0.0e+00 1519.6 911 82.8
unitig_736.g22260 Utricularia gibba HOM05D002281 ORTHO05D005599 0.0e+00 1504.2 1181 66.5
Pp3c21_8020 Physcomitrium patens HOM05D002281 ORTHO05D005599 0.0e+00 1502.6 1326 57.2
Peaxi162Scf00285g00226 Petunia axillaris HOM05D002281 ORTHO05D005599 0.0e+00 1473.4 911 80.5
SMO348G0052 Selaginella moellendorffii HOM05D002281 ORTHO05D005599 0.0e+00 1473.4 1289 57.8
MD12G1252900 Malus domestica HOM05D002281 ORTHO05D005599 0.0e+00 1472.2 844 86.4
DCAR_005524 Daucus carota HOM05D002281 ORTHO05D005599 0.0e+00 1408.3 954 75.1
Pp3c2_6040 Physcomitrium patens HOM05D002281 ORTHO05D005599 0.0e+00 1343.9 1308 52.9
ATR0787G096 Amborella trichopoda HOM05D002281 ORTHO05D005599 0.0e+00 1306.2 916 70.4
Hma1.2p1_0153F.1_g067920 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 0.0e+00 1147.5 687 84.9
CAN.G61.7 Capsicum annuum HOM05D002281 ORTHO05D005599 5.2e-262 908.7 803 61.6
Ah.06g188740 Amaranthus hybridus HOM05D002281 ORTHO05D005599 4.2e-256 889.0 824 58.6
Lj2A49T37 Lonicera japonica HOM05D002281 ORTHO05D005599 7.5e-245 851.7 476 90.5
AUR62006997 Chenopodium quinoa HOM05D002281 ORTHO05D005599 1.2e-215 754.6 498 78.5
MD12G1252700 Malus domestica HOM05D002281 ORTHO05D005599 3.9e-209 733.0 450 83.3
SHI14430 Sapria himalayana HOM05D002281 ORTHO05D005599 7.6e-205 718.8 551 67.7
Actinidia03824 Actinidia chinensis HOM05D002281 ORTHO05D005599 4.6e-178 629.8 346 93.6
SEGI_41506 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 6.1e-178 629.4 420 74.0
RcHm_v2.0_Chr3g0448911 Rosa chinensis HOM05D002281 ORTHO05D005599 6.9e-174 615.9 346 91.6
CAN.G61.6 Capsicum annuum HOM05D002281 ORTHO05D005599 2.7e-170 604.0 345 90.7
Lalb_Chr18g0044191 Lupinus albus HOM05D002281 ORTHO05D005599 6.7e-169 599.4 346 89.3
CDE01G0796 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 1.8e-166 591.3 454 65.4
ATR0787G220 Amborella trichopoda HOM05D002281 ORTHO05D005599 2.2e-164 584.3 346 87.0
Psat0s2603g0080 Pisum sativum HOM05D002281 ORTHO05D005599 2.1e-162 577.8 335 83.3
ClCG03G011400 Citrullus lanatus HOM05D002281 ORTHO05D005599 3.0e-161 573.9 346 86.4
CsaV3_1G040370 Cucumis sativus L. HOM05D002281 ORTHO05D005599 2.9e-156 557.4 346 84.1
CDE01G0576 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 1.1e-155 555.4 375 72.8
CBR_g23328 Chara braunii HOM05D002281 ORTHO05D005599 1.4e-150 538.5 636 45.1
Cpa.g.sc51.41 Carica papaya HOM05D002281 ORTHO05D005599 2.4e-150 537.7 302 85.8
vmacro19963 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 9.8e-144 515.8 393 72.5
Peaxi162Scf00285g00225 Petunia axillaris HOM05D002281 ORTHO05D005599 3.8e-140 503.8 274 93.8
DCAR_005525 Daucus carota HOM05D002281 ORTHO05D005599 1.1e-131 475.7 259 92.7
CAN.G61.8 Capsicum annuum HOM05D002281 ORTHO05D005599 4.1e-126 457.2 410 60.2
HPP92_013016 Vanilla planifolia HOM05D002281 ORTHO05D005599 2.3e-124 451.4 302 74.2
Lj2A49G34 Lonicera japonica HOM05D002281 ORTHO05D005599 6.8e-121 439.9 243 88.1
Haze_04492 Corylus avellana HOM05D002281 ORTHO05D005599 1.4e-118 432.2 274 83.6
HPP92_013015 Vanilla planifolia HOM05D002281 ORTHO05D005599 2.3e-108 398.3 346 62.7
arahy.Tifrunner.gnm1.ann1.I7KFZB Arachis hypogaea HOM05D002281 ORTHO05D005599 1.7e-103 382.1 266 78.9
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 3.2e-102 377.9 260 77.7
SEGI_00068 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 1.7e-87 328.9 264 61.7
vmacro19965 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 2.1e-77 295.4 166 83.7
CBR_g23326 Chara braunii HOM05D002281 ORTHO05D005599 8.4e-71 273.5 465 33.8
Hma1.2p1_0153F.1_g067900 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 1.9e-70 272.3 153 92.2
Ah.06g188770 Amaranthus hybridus HOM05D002281 ORTHO05D005599 7.9e-61 240.4 134 89.6
vmacro19966 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 1.3e-58 233.0 424 37.5
SHI14432 Sapria himalayana HOM05D002281 ORTHO05D005599 2.9e-55 221.9 142 73.9
Lj2A50T26 Lonicera japonica HOM05D002281 ORTHO05D005599 3.2e-54 218.4 133 81.2
Lj2A49G35 Lonicera japonica HOM05D002281 ORTHO05D005599 4.2e-54 218.0 127 82.7
Cc10_g10600 Coffea canephora HOM05D002281 ORTHO05D005599 6.1e-53 214.2 129 87.6
Lj2A49T38 Lonicera japonica HOM05D002281 ORTHO05D005599 3.3e-51 208.4 119 83.2
CDE02G3044 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 1.4e-41 176.4 127 66.1
BraA03t10210Z Brassica rapa HOM05D002281 ORTHO05D005599 2.0e-40 172.6 123 73.2
Gorai.007G272700 Gossypium raimondii HOM05D002281 ORTHO05D005599 3.5e-40 171.8 98 81.6
Gohir.D11G253675 Gossypium hirsutum HOM05D002281 ORTHO05D005599 2.2e-39 169.1 98 80.6
CBR_g74560 Chara braunii HOM05D002281 ORTHO05D005599 1.6e-37 162.9 164 54.3
SEGI_02952 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 2.0e-35 156.0 113 68.1
A03p08860 Brassica napus HOM05D002281 ORTHO05D005599 2.6e-35 155.6 123 67.5
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 4.4e-35 154.8 128 67.2
SEGI_33538 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 5.5e-30 137.9 95 63.2
SEGI_28731 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 7.5e-27 127.5 133 50.4
Gohir.D11G253550 Gossypium hirsutum HOM05D002281 ORTHO05D005599 2.2e-26 125.9 75 80.0
Gorai.007G272500 Gossypium raimondii HOM05D002281 ORTHO05D005599 2.2e-26 125.9 75 78.7
Nn6g32299 Nelumbo nucifera HOM05D002281 ORTHO05D005599 2.0e-24 119.4 73 82.2
Gohir.A11G244201 Gossypium hirsutum HOM05D002281 ORTHO05D005599 3.5e-24 118.6 73 75.3
SHI14427 Sapria himalayana HOM05D000030 ORTHO05D000009 5.0e-23 114.8 130 51.5
arahy.Tifrunner.gnm1.ann1.57298L Arachis hypogaea HOM05D002281 ORTHO05D005599 1.2e-16 93.6 99 55.6
HPP92_013017 Vanilla planifolia HOM05D002281 ORTHO05D005599 7.3e-14 84.3 58 72.4
QL06p040095 Quercus lobata HOM05D002281 ORTHO05D005599 8.3e-10 70.9 76 52.6
Ah.06g188760 Amaranthus hybridus HOM05D002281 ORTHO05D006774 3.2e-09 68.9 142 35.9
vmacro19964 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 5.0e-07 61.6 34 79.4


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