Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.1091 Acer truncatum HOM05D006470 ORTHO05D007978 5.0e-60 234.2 114 100.0
Thecc.01G254400 Theobroma cacao HOM05D006470 ORTHO05D007978 6.6e-20 100.9 88 59.1
Peaxi162Scf00415g00003 Petunia axillaris HOM05D006470 ORTHO05D007978 7.3e-19 97.4 88 52.3
Nn1g02880 Nelumbo nucifera HOM05D006470 ORTHO05D007978 5.3e-17 91.3 87 50.6
Hma1.2p1_0576F.1_g181850 Hydrangea macrophylla HOM05D006470 ORTHO05D007978 9.0e-17 90.5 88 52.3
Oeu039680.1 Olea europaea HOM05D006470 ORTHO05D007978 1.5e-16 89.7 86 55.8
Nitab4.5_0001945g0030 Nicotiana tabacum HOM05D006470 ORTHO05D007978 2.2e-15 85.9 78 50.0
Hma1.2p1_0273F.1_g109440 Hydrangea macrophylla HOM05D006470 ORTHO05D007978 4.9e-15 84.7 70 57.1
Duzib133G1499 Durio zibethinus HOM05D006470 ORTHO05D007978 6.4e-15 84.3 88 51.1
Gohir.D07G156600 Gossypium hirsutum HOM05D006470 ORTHO05D007978 1.1e-14 83.6 84 50.0
Ca_09663_v3 Cicer arietinum L. HOM05D006470 ORTHO05D007978 1.9e-14 82.8 87 52.9
Lj2P1147T22 Lonicera japonica HOM05D006470 ORTHO05D007978 1.9e-14 82.8 91 49.5
CSS0011402 Camellia sinensis var. sinensis HOM05D006470 ORTHO05D007978 7.1e-14 80.9 82 51.2
Gorai.001G179700 Gossypium raimondii HOM05D006470 ORTHO05D007978 7.1e-14 80.9 84 48.8
Duzib138G0951 Durio zibethinus HOM05D006470 ORTHO05D007978 9.3e-14 80.5 89 49.4
CSS0034739 Camellia sinensis var. sinensis HOM05D006470 ORTHO05D007978 6.0e-13 77.8 68 54.4
Atru.BG.79.p Acer truncatum HOM05D006470 ORTHO05D007978 1.0e-12 77.0 54 74.1
arahy.Tifrunner.gnm1.ann1.NTND9X Arachis hypogaea HOM05D006470 ORTHO05D007978 1.8e-12 76.3 101 48.5
Rhsim13G0037300 Rhododendron simsii HOM05D006470 ORTHO05D007978 2.3e-12 75.9 64 60.9
Glyma.10G038800 Glycine max HOM05D006470 ORTHO05D007978 3.0e-12 75.5 87 50.6
Lj5g0015356 Lotus japonicus HOM05D006470 ORTHO05D007978 3.0e-12 75.5 90 50.0
Medtr1g069695 Medicago truncatula HOM05D006470 ORTHO05D007978 3.9e-12 75.1 90 50.0
Potri.005G227600 Populus trichocarpa HOM05D006470 ORTHO05D007978 3.9e-12 75.1 93 48.4
Lsat_1_v5_gn_9_10681 Lactuca sativa HOM05D006470 ORTHO05D007978 5.1e-12 74.7 73 47.9
TWI12G0101 Tripterygium wilfordii HOM05D006470 ORTHO05D007978 5.1e-12 74.7 93 51.6
CiPaw.03G267400 Carya illinoinensis HOM05D006470 ORTHO05D007978 6.7e-12 74.3 91 47.3
COL.COLO4_04011 Corchorus olitorius HOM05D006470 ORTHO05D007978 8.7e-12 73.9 94 45.7
Manes.12G034500 Manihot esculenta HOM05D006470 ORTHO05D007978 1.5e-11 73.2 84 50.0
Sabra05G0175600 Salix brachista HOM05D006470 ORTHO05D007978 1.9e-11 72.8 94 45.7
MD10G1180100 Malus domestica HOM05D006470 ORTHO05D007978 3.3e-11 72.0 76 51.3
FAN24G3268 Fragaria x ananassa HOM05D006470 ORTHO05D007978 9.6e-11 70.5 65 56.9
Sc05g0003180 Simmondsia chinensis HOM05D006470 ORTHO05D007978 9.6e-11 70.5 82 41.5
THA.LOC104814525 Tarenaya hassleriana HOM05D006470 ORTHO05D007978 1.3e-10 70.1 80 43.8
Cc01_g18070 Coffea canephora HOM05D006470 ORTHO05D007978 1.6e-10 69.7 84 44.0
Nitab4.5_0003295g0060 Nicotiana tabacum HOM05D006470 ORTHO05D007978 4.8e-10 68.2 77 46.8
Sp7g26550 Schrenkiella parvula HOM05D006470 ORTHO05D007978 8.1e-10 67.4 54 53.7
AL7G23980 Arabidopsis lyrata HOM05D006470 ORTHO05D007978 3.1e-09 65.5 51 56.9
Psat6g062280 Pisum sativum HOM05D006470 ORTHO05D007978 3.1e-09 65.5 77 51.9
Dinv22382 Davidia involucrata HOM05D006470 ORTHO05D007978 5.3e-09 64.7 57 52.6
Manes.13G036500 Manihot esculenta HOM05D006470 ORTHO05D007978 9.0e-09 63.9 91 44.0
FvH4_2g21070 Fragaria vesca HOM05D006470 ORTHO05D007978 1.2e-08 63.5 65 52.3
Phvul.007G191000 Phaseolus vulgaris HOM05D006470 ORTHO05D007978 1.2e-08 63.5 89 46.1
Ciclev10020031m.g Citrus clementina HOM05D006470 ORTHO05D007978 2.0e-08 62.8 58 51.7
VMungo0720G2572 Vigna mungo HOM05D006470 ORTHO05D007978 2.6e-08 62.4 85 44.7
TPR.G29693 Trifolium pratense HOM05D006470 ORTHO05D007978 3.4e-08 62.0 54 55.6
DCAR_012563 Daucus carota HOM05D006470 ORTHO05D007978 4.5e-08 61.6 78 39.7
TAR362G1291 Trochodendron aralioides HOM05D006470 ORTHO05D007978 9.9e-08 60.5 59 49.2
Gohir.A07G150300 Gossypium hirsutum HOM05D006470 ORTHO05D007978 2.2e-07 59.3 54 50.0
QL09p040137 Quercus lobata HOM05D006470 ORTHO05D007978 2.2e-07 59.3 83 42.2
Actinidia37529 Actinidia chinensis HOM05D006470 ORTHO05D007978 8.4e-07 57.4 58 50.0
ClCG07G001200 Citrullus lanatus HOM05D006470 ORTHO05D007978 8.4e-07 57.4 61 47.5
Solyc09g072630.3 Solanum lycopersicum HOM05D006470 ORTHO05D007978 8.4e-07 57.4 57 47.4
TWI18G0736 Tripterygium wilfordii HOM05D006470 ORTHO05D007978 1.4e-06 56.6 91 41.8
HanXRQChr10g0280761 Helianthus annuus HOM05D006470 ORTHO05D007978 2.4e-06 55.8 93 36.6
AUR62025485 Chenopodium quinoa HOM05D006470 ORTHO05D007978 5.5e-06 54.7 73 34.2
Thhalv10027034m.g Eutrema salsugineum HOM05D006470 ORTHO05D007978 5.5e-06 54.7 51 49.0


User provided reference genes

Program Settings